Last change
on this file was
12014,
checked in by westram, 11 years ago
|
- reintegrates 'fix' into 'trunk'
- slightly changes consensus generation
- adds:
|
File size:
15.8 KB
|
Line | |
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1 | [Sun Apr 13 13:55:19 2014: ARB consensus tree build from 3 trees: |
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2 | - consense/3/bootstrapped_1.tree |
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3 | - consense/3/bootstrapped_2.tree |
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4 | - consense/3/bootstrapped_3.tree |
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5 | Sun Apr 13 13:55:19 2014: tree_consense3 saved to consense/3/consense3.tree |
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6 | ] |
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7 | ( |
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8 | ( |
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9 | MhuCaps3:0.06451, |
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10 | ThtNivea:0.06440 |
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11 | ):0.03606, |
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12 | ( |
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13 | ( |
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14 | LbnAlexa:0.00947, |
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15 | ( |
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16 | LbnMarin:0.00681, |
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17 | LbnzAlb4:0.00334 |
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18 | ):0.00562 |
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19 | ):0.04237, |
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20 | ( |
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21 | ( |
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22 | RblTherm:0.03006, |
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23 | ( |
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24 | RblAerol:0.02420, |
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25 | RblMesop:0.01513 |
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26 | ):0.01019 |
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27 | ):0.02968, |
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28 | ( |
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29 | LokPyose:0.03212, |
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30 | ( |
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31 | RclMahon:0.03361, |
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32 | ( |
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33 | ( |
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34 | DnrShiba:0.02516, |
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35 | RsbElon4:0.01905 |
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36 | ):0.01036, |
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37 | ( |
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38 | ( |
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39 | MmbAlkal:0.02320, |
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40 | ( |
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41 | ( |
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42 | MabPelag:0.00053, |
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43 | MabSalin:0.00205 |
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44 | ):0.03337, |
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45 | ( |
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46 | OnlBats2:0.01587, |
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47 | OnlNanha:0.02374 |
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48 | )67:0.00654 |
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49 | )33:0.00123 |
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50 | )33:0.00466, |
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51 | ( |
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52 | ( |
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53 | AttHeli2:0.02838, |
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54 | SgtStel2:0.02516 |
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55 | ):0.01053, |
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56 | ( |
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57 | ( |
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58 | DonEburn:0.01845, |
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59 | ( |
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60 | ( |
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61 | MrvAlgi3:0.01485, |
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62 | ( |
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63 | PaoMaris:0.02766, |
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64 | ( |
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65 | PgbBermu:0.00909, |
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66 | SlpMuco2:0.01821 |
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67 | ):0.00711 |
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68 | )67:0.00470 |
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69 | )33:0.00328, |
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70 | ( |
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71 | ( |
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72 | OnlSpec4:0.01775, |
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73 | RueSpe48:0.01507 |
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74 | )67:0.00772, |
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75 | ( |
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76 | TscHalod:0.02143, |
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77 | ( |
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78 | RsxSpec6:0.01064, |
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79 | ( |
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80 | RsxHalo2:0.01825, |
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81 | ( |
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82 | CiaSalin:0.02048, |
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83 | RsxHalo3:0.02530 |
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84 | )67:0.00687 |
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85 | )67:0.00494 |
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86 | )33:0.00743 |
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87 | )33:0.00282 |
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88 | )33:0.00213 |
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89 | )33:0.00359 |
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90 | )33:0.00394, |
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91 | ( |
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92 | ( |
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93 | ( |
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94 | ShaMarin:0.00789, |
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95 | ShaSpeci:0.01094 |
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96 | ):0.00997, |
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97 | ( |
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98 | ( |
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99 | PhbSpe37:0.02020, |
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100 | ( |
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101 | ( |
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102 | YanPacif:0.01593, |
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103 | ( |
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104 | CieSpec9:0.01551, |
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105 | ( |
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106 | CieThioo:0.00091, |
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107 | MrnAlp10:0.00077 |
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108 | ):0.01289 |
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109 | )67:0.00625 |
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110 | )67:0.00744, |
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111 | ( |
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112 | ( |
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113 | PhbArcti:0.02157, |
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114 | PhbGall5:0.00994 |
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115 | )67:0.00543, |
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116 | ( |
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117 | ( |
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118 | LsnAquim:0.00435, |
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119 | LsnMeth2:0.00717 |
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120 | ):0.00582, |
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121 | ( |
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122 | MrnAlp12:0.01117, |
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123 | PhbCaeru:0.00816 |
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124 | )67:0.00667 |
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125 | )67:0.00345 |
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126 | )67:0.00275 |
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127 | )33:0.00116 |
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128 | )33:0.00577, |
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129 | ( |
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130 | ( |
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131 | RsrSpec6:0.02562, |
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132 | ( |
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133 | ( |
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134 | RosSpe24:0.01242, |
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135 | RosSpe86:0.01095 |
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136 | ):0.01226, |
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137 | ( |
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138 | ( |
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139 | RsrAestu:0.01053, |
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140 | RsrNubi2:0.01765 |
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141 | ):0.00290, |
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142 | ( |
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143 | RsrTole2:0.01450, |
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144 | ( |
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145 | RosSpe15:0.00133, |
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146 | RsrMucos:0.00353 |
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147 | ):0.01719 |
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148 | ):0.01321 |
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149 | )33:0.00123 |
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150 | )67:0.00329 |
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151 | )67:0.00481, |
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152 | ( |
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153 | RueSpe62:0.01744, |
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154 | ( |
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155 | ( |
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156 | PdgAquim:0.00899, |
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157 | PdgSpec5:0.02418 |
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158 | ):0.00908, |
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159 | ( |
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160 | ( |
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161 | RueMobi3:0.00436, |
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162 | ( |
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163 | RueSpe54:0.00000, |
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164 | RueSpe56:-0.00000 |
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165 | ):0.00167 |
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166 | ):0.01328, |
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167 | ( |
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168 | SbtPomer:0.01546, |
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169 | ( |
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170 | RueAtla7:0.00465, |
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171 | ( |
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172 | RhbBac48:0.00951, |
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173 | SbtLacus:0.00857 |
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174 | )67:0.00237 |
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175 | ):0.00423 |
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176 | )67:0.00118 |
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177 | )67:0.00410 |
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178 | )67:0.00395 |
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179 | )67:0.00532 |
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180 | )33:0.00219 |
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181 | )33:0.00271 |
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182 | )33:0.00144, |
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183 | ( |
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184 | ( |
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185 | ( |
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186 | TlbSten4:0.02121, |
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187 | ( |
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188 | OcdSpec8:0.01591, |
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189 | ( |
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190 | OcdOrien:0.00695, |
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191 | TlbArena:0.00627 |
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192 | )67:0.00458 |
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193 | ):0.00807 |
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194 | )33:0.00506, |
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195 | ( |
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196 | RsrCrass:0.01889, |
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197 | ( |
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198 | JnnSpec8:0.02355, |
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199 | ( |
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200 | JnnDongh:0.01678, |
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201 | ( |
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202 | JnnPohan:0.01328, |
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203 | ( |
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204 | ( |
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205 | JnnHelg4:0.00683, |
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206 | JnnRubr2:0.00805 |
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207 | ):0.00959, |
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208 | ( |
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209 | JnnSeoha:0.01912, |
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210 | JnnSeosi:0.01499 |
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211 | )67:0.00378 |
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212 | )67:0.00344 |
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213 | )67:0.00137 |
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214 | ):0.00428 |
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215 | ):0.00447 |
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216 | )33:0.00277 |
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217 | )33:0.00416, |
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218 | ( |
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219 | ( |
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220 | NerIgna3:0.02975, |
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221 | ( |
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222 | ( |
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223 | RosDeni2:0.01109, |
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224 | ( |
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225 | RosLito2:0.00173, |
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226 | RosLito8:0.00060 |
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227 | ):0.00616 |
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228 | ):0.01163, |
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229 | ( |
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230 | SltGutt2:0.01570, |
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231 | ( |
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232 | ( |
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233 | ( |
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234 | OcbIndo3:0.00066, |
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235 | SltSpe32:0.00006 |
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236 | ):0.00196, |
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237 | ( |
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238 | SltDeli3:0.00365, |
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239 | SltDubi2:0.00130 |
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240 | )67:0.00112 |
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241 | ):0.01337, |
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242 | ( |
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243 | SltMedi2:0.00576, |
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244 | ( |
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245 | SltBrev2:0.01081, |
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246 | ( |
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247 | SltPont3:-0.00002, |
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248 | ( |
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249 | BcrNAS14:0.00035, |
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250 | SltSpe43:-0.00034 |
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251 | )67:0.00098 |
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252 | ):0.00540 |
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253 | )67:0.00146 |
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254 | ):0.00263 |
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255 | )33:0.00431 |
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256 | )67:0.00114 |
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257 | ):0.00595 |
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258 | )67:0.00303, |
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259 | ( |
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260 | ( |
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261 | ( |
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262 | OnlGran2:0.02000, |
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263 | RsnAnta2:0.02243 |
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264 | )67:0.00850, |
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265 | ( |
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266 | LokRosea:0.01947, |
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267 | ( |
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268 | ( |
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269 | LokAgnit:0.01279, |
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270 | LokVest4:0.01540 |
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271 | ):0.01034, |
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272 | ( |
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273 | LokFryx2:0.00617, |
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274 | LokSals5:0.00594 |
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275 | ):0.02174 |
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276 | )67:0.00335 |
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277 | ):0.01040 |
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278 | )33:0.00916, |
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279 | ( |
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280 | ( |
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281 | TlsAestu:0.01418, |
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282 | ( |
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283 | TlsGela3:0.00867, |
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284 | TlsMedi4:0.01553 |
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285 | )67:0.00537 |
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286 | ):0.00821, |
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287 | ( |
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288 | OcdSpec4:0.02448, |
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289 | ( |
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290 | ( |
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291 | OcdSpe18:0.00988, |
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292 | ( |
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293 | OcdSpe19:0.00059, |
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294 | OcdSpe21:-0.00059 |
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295 | ):0.00611 |
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296 | )67:0.00504, |
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297 | ( |
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298 | OcdSpec6:0.01090, |
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299 | ( |
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300 | Unc00rpc:0.00147, |
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301 | ( |
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302 | Unc03dtr:0.00135, |
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303 | ( |
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304 | OcdSpe11:-0.00013, |
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305 | ( |
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306 | ( |
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307 | AticSea9:-0.00027, |
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308 | ( |
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309 | AticSe10:-0.00022, |
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310 | ( |
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311 | OcdSpec9:0.00233, |
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312 | Unc03nea:-0.00116 |
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313 | ):0.00067 |
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314 | )33:0.00026 |
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315 | )33:0.00005, |
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316 | ( |
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317 | OcdSpec2:-0.00024, |
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318 | ( |
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319 | AticSea6:0.00035, |
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320 | ( |
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321 | OcdSpeci:-0.00030, |
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322 | ( |
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323 | AticSea7:-0.00012, |
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324 | ( |
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325 | OcdSpec3:-0.00023, |
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326 | ( |
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327 | AticSe15:-0.00005, |
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328 | ( |
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329 | OcdSpec5:-0.00000, |
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330 | ( |
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331 | OcdSpe15:-0.00000, |
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332 | ( |
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333 | OcdSpe13:0.00000, |
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334 | ( |
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335 | AticSe36:-0.00000, |
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336 | ( |
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337 | ( |
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338 | AticSe32:-0.00000, |
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339 | OcdSpe10:-0.00001 |
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340 | ):0.00000, |
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341 | ( |
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342 | OcdSpe12:-0.00001, |
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343 | ( |
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344 | AticSe25:-0.00010, |
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345 | ( |
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346 | AticSe29:-0.00010, |
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347 | ( |
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348 | AticSe30:0.00178, |
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349 | ( |
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350 | AticSe28:0.00074, |
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351 | AticSe33:0.00017 |
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352 | )33:0.00015 |
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353 | )67:0.00013 |
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354 | )33:0.00014 |
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355 | )33:0.00008 |
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356 | ):0.00000 |
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357 | ):0.00000 |
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358 | )33:0.00000 |
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359 | )33:0.00000 |
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360 | )33:0.00000 |
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361 | )33:0.00000 |
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362 | )33:0.00001 |
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363 | ):0.00000 |
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364 | )33:0.00001 |
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365 | )33:0.00006 |
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366 | )33:0.00009 |
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367 | )33:0.00005 |
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368 | )33:0.00019 |
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369 | ):0.00013 |
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370 | ):0.00155 |
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371 | )67:0.00076 |
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372 | ):0.00909 |
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373 | )33:0.00213 |
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374 | ):0.00603 |
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375 | )67:0.00411 |
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376 | )33:0.00278 |
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377 | )33:0.00110 |
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378 | )33:0.00353 |
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379 | )33:0.00125 |
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380 | )33:0.00093 |
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381 | )33:0.00368 |
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382 | )67:0.00255 |
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383 | )67:0.00343 |
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384 | )67:0.00445 |
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385 | )67:0.00864 |
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386 | ):0.02634 |
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387 | ):0.03606 |
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388 | ); |
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