source:
tags/arb-6.0.2
Name | Size | Rev | Age | Author | Last Change |
---|---|---|---|---|---|
../ | |||||
AISC | | 11176 | 10 years | westram | * fixes compilation with COVERAGE!=0 (was broken by [10956]) |
AISC_COM | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
AISC_MKPTPS | | 11889 | 10 years | westram | - add missing comment to closing #endif of test-sections |
ARB_GDE | | 12444 | 10 years | westram | * merge hotfixes from 'trunk' into 'stable' * adds: - … |
ARBDB | | 12424 | 10 years | westram | * merge hotfixes from 'trunk' into 'stable' * adds: - … |
AWT | | 12555 | 10 years | westram | * merge hotfixes from 'trunk' into 'stable' * adds: - … |
AWTC | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
AWTI | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
bin | | 11778 | 10 years | westram | * reintegrates 'macros' into 'trunk' - implements #456 * adds: … |
BINDEP | | 10577 | 11 years | westram | - added a bunch of small arb tools into dependency decls |
BINDINGS | | 10998 | 10 years | westram | * cflags were completely unused (untested) |
BUGEX | | 7044 | 13 years | westram | * fixed include wrappers (merges [7006] [7007]) - use gcc-style … |
CONSENSUS_TREE | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
CONVERTALN | | 11947 | 10 years | westram | * merge misc changes from 'customize' into 'trunk' * adds: - … |
CORE | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
DBSERVER | | 11167 | 10 years | westram | - leak stuffed |
DIST | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
doc | | 6141 | 15 years | westram | * spellchecked all (phew) |
EDIT4 | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
EISPACK | | 10996 | 10 years | westram | * use cflags before cxxflags |
etc | | 6141 | 15 years | westram | * spellchecked all (phew) |
GDE | | 12686 | 10 years | epruesse | merge log:trunk@12659:12662 to stable |
GDEHELP | | 11886 | 10 years | westram | * reintegrates 'cleanup' into 'trunk' * adds: - … |
GENOM | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
GENOM_IMPORT | | 11844 | 10 years | westram | * merge [11840:11843] from 'customize' into 'trunk' * adds: - … |
GL | | 11805 | 10 years | westram | * export 'LINUX' and 'REDHAT' to submakefiles * use ifeq instead of … |
HEADERLIBS | | 7895 | 13 years | westram | * added arb_rnacma (correlated mutation analysis) written by Breno … |
HELP_SOURCE | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
ISLAND_HOPPING | | 10997 | 10 years | westram | * use cflags before cxxflags (where locally modified) |
lib | | 12718 | 10 years | epruesse | add arb.xml |
MERGE | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
MULTI_PROBE | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
NALIGNER | | 11060 | 10 years | westram | * reintegrates 'ptsfix' into 'trunk': * adds: - … |
NAMES | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
NAMES_COM | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
NTREE | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
PARSIMONY | | 12554 | 10 years | westram | * merge fixes from 'trunk' into 'stable' * adds: - … |
PERL2ARB | | 12313 | 10 years | westram | * merge bugfixes from 'trunk' into 'rc' - fixes build process when … |
PERL_SCRIPTS | | 12556 | 10 years | westram | * merge hotfixes from 'trunk' into 'stable' * adds: - … |
PERLTOOLS | | 11844 | 10 years | westram | * merge [11840:11843] from 'customize' into 'trunk' * adds: - … |
PHYLO | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
PRIMER_DESIGN | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
PROBE | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
PROBE_COM | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
PROBE_DESIGN | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
PROBE_SET | | 11464 | 10 years | westram | - un-dummy-fied transaction (renames only) |
ptpan | | 11060 | 10 years | westram | * reintegrates 'ptsfix' into 'trunk': * adds: - … |
READSEQ | | 11805 | 10 years | westram | * export 'LINUX' and 'REDHAT' to submakefiles * use ifeq instead of … |
RNA3D | | 12313 | 10 years | westram | * merge bugfixes from 'trunk' into 'rc' - fixes build process when … |
RNACMA | | 12303 | 10 years | westram | * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - … |
SECEDIT | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
SEQ_QUALITY | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
SERVERCNTRL | | 11915 | 10 years | westram | - changed 'server startup error' message (was to closely considering … |
SH | | 12685 | 10 years | epruesse | merge debian patch 30_tmpfile_CVE-2008-5378.patch |
SL | | 12554 | 10 years | westram | * merge fixes from 'trunk' into 'stable' * adds: - … |
SOURCE_TOOLS | | 12683 | 10 years | westram | * patchlevel 1→2 |
STAT | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
TEMPLATES | | 12332 | 10 years | westram | * merge bugfixes from 'trunk' into 'rc' - installation @ debian … |
TOOLS | | 12555 | 10 years | westram | * merge hotfixes from 'trunk' into 'stable' * adds: - … |
TREEGEN | | 10996 | 10 years | westram | * use cflags before cxxflags |
UNIT_TESTER | | 12267 | 10 years | westram | * full update from 'trunk' into 'rc' - because i was (nearly) only … |
util | | 12717 | 10 years | epruesse | add lib/desktop to package |
WETC | | 11034 | 10 years | westram | * depends for [11033] |
WINDOW | | 12332 | 10 years | westram | * merge bugfixes from 'trunk' into 'rc' - installation @ debian … |
XML | | 11012 | 10 years | westram | * misc warnings fixed; others suppressed |
XML_IMPORT | | 10996 | 10 years | westram | * use cflags before cxxflags |
arb_CHANGES.txt | 16.5 KB | 12722 | 10 years | westram | - insert release date |
arb_install.sh | 14.2 KB | 11718 | 10 years | westram | * reverts [11717] * merge [11714] into trunk (accidentally went into … |
arb_INSTALL.txt | 4.6 KB | 12332 | 10 years | westram | * merge bugfixes from 'trunk' into 'rc' - installation @ debian … |
arb_LICENSE.txt | 10.8 KB | 10842 | 10 years | westram | * reintegrates 'help' into 'trunk': * adds: - … |
arb_OS_X.txt | 5.5 KB | 12556 | 10 years | westram | * merge hotfixes from 'trunk' into 'stable' * adds: - … |
arb_OS_X_MacPorts.txt | 370 bytes | 6288 | 14 years | westram | * include ALL arb_*.txt into release tarball * renamed … |
arb_README.txt | 7.4 KB | 12563 | 10 years | westram | * make version indenpendent (2nd attempt) |
arb_UBUNTU.txt | 1.3 KB | 10420 | 11 years | epruesse | - work around linking in centos5 - add libreadline-dev to ubuntu … |
arbsrc_README.txt | 210 bytes | 6288 | 14 years | westram | * include ALL arb_*.txt into release tarball * renamed … |
arbsrc_README_gcc.txt | 2.1 KB | 7331 | 13 years | westram | - tested and added gcc 4.5.2 |
config.makefile.template | 1.7 KB | 12694 | 10 years | epruesse | merge log:trunk@12692 (broken DEBIAN := 1 setting) |
demo.arb | 78.9 KB | 7664 | 13 years | westram | * merge from dev [7509] [7510] [7511] [7514] [7517] [7520] [7524] … |
Doxyfile | 62.3 KB | 11492 | 10 years | westram | * fix several doxygen issues (doxygen 1.6.3) - force macro … |
Makefile | 65.4 KB | 12693 | 10 years | epruesse | fix PERL_SCRIPTS/test/test.stamp not cleaned |
README | 717 bytes | 5390 | 16 years | westram | - TAB-Ex |
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