1 | #!/bin/bash |
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2 | # |
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3 | # How to use: |
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4 | # |
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5 | # A. SETUP |
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6 | # -------- |
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7 | # |
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8 | # 1. create a new directory, e.g. |
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9 | # mkdir my_arb_compile; cd my_arb_compile |
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10 | # |
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11 | # 2. checkout arb, e.g. (the last argument is the name of the target directory) |
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12 | # svn co svn+ssh://USERNAME@svn.arb-home.de/svn/ARB/trunk myARB |
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13 | # # or |
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14 | # svn co --username coder --password gimmeARBsource http://svn.mikro.biologie.tu-muenchen.de/svn/trunk myARB |
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15 | # |
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16 | # 3. link the included compile script, e.g. |
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17 | # ln -s myARB/util/arb_compile.sh compile_myARB.sh |
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18 | # |
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19 | # 4. call the script |
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20 | # ./compile_myARB.sh |
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21 | # |
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22 | # 5. review the generated config |
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23 | # vi compile_myARB.config |
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24 | # |
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25 | # 6. call the script again (this will generate config.makefile and fail) |
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26 | # ./compile_myARB.sh |
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27 | # |
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28 | # 7. edit the generated config.makefile (default builds a openGL/64bit/linux-ARB) |
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29 | # vi myARB/config.makefile |
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30 | # |
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31 | # 8. call the script again (this shall succeed) |
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32 | # ./compile_myARB.sh |
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33 | # |
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34 | # |
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35 | # B. UPGRADE |
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36 | # ----------- |
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37 | # |
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38 | # 1. simply call the script to upgrade ARB to newest revision |
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39 | # ./compile_myARB.sh |
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40 | # |
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41 | # |
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42 | # C. Multiple versions (in one 'my_arb_compile' directory) |
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43 | # -------------------- |
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44 | # |
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45 | # When you use a different name for the link target in step A.3. it |
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46 | # is possible to work with multiple checkouts and multiple configs |
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47 | # inside the same 'my_arb_compile' directory. |
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48 | # The name used as checkout directory has to be changed for subsequent |
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49 | # versions. Change 'myARB' to a different name in steps A.2., A.3. and A.7 |
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50 | # |
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51 | |
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52 | |
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53 | default_config() { |
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54 | echo "# config to compile ARB via $BASENAME.sh" |
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55 | echo "" |
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56 | echo "# Subdirectory in which ARB is located:" |
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57 | echo "SUBDIR=myARB" |
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58 | echo "" |
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59 | echo "# Real CPU cores" |
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60 | echo "CORES=2" |
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61 | echo "" |
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62 | echo "# SVN revision to use (empty=newest)" |
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63 | echo "REVISION=" |
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64 | echo "" |
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65 | } |
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66 | |
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67 | update() { |
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68 | set -x |
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69 | make clean && \ |
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70 | svn revert -R . && \ |
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71 | svn up --force $UPDATE_ARGS |
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72 | } |
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73 | build() { |
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74 | make -j$CORES tarfile |
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75 | } |
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76 | |
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77 | upgrade() { |
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78 | echo "Upgrading ARB checkout in '$ARBHOME'" |
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79 | echo "" |
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80 | echo "Starting build process" |
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81 | echo "(you may watch the output using" |
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82 | echo " less +F $LOG" |
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83 | echo "in another terminal)" |
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84 | echo "" |
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85 | (update && build) >& $LOG |
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86 | } |
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87 | |
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88 | arbshell() { |
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89 | echo "ARBHOME now is '$ARBHOME'" |
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90 | $ARBHOME/bin/arb_ntree --help 2>&1 | grep version |
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91 | tcsh |
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92 | ARBHOME=$OLDARBHOME |
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93 | echo "ARBHOME now is again '$ARBHOME'" |
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94 | } |
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95 | |
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96 | # ---------------------------------------- |
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97 | |
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98 | if [ !$?ARBHOME ]; then |
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99 | ARBHOME='' |
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100 | fi |
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101 | OLDARBHOME=$ARBHOME |
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102 | |
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103 | BASEDIR=`pwd` |
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104 | BASENAME=`basename $0 | perl -pne 's/.sh//'` |
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105 | |
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106 | echo "BASENAME='$BASENAME'" |
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107 | |
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108 | CONFIG=$BASENAME.config |
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109 | LOG=$BASEDIR/$BASENAME.log |
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110 | |
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111 | if [ -f $CONFIG ]; then |
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112 | source $CONFIG |
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113 | else |
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114 | default_config > $CONFIG |
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115 | echo "$CONFIG has been generated" |
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116 | SUBDIR= |
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117 | fi |
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118 | |
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119 | if [ "$SUBDIR" = "" ]; then |
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120 | echo "Review config, then rerun this script" |
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121 | else |
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122 | ARBHOME=$BASEDIR/$SUBDIR |
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123 | |
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124 | if [ ! -d $ARBHOME ]; then |
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125 | echo "ARBHOME='$ARBHOME' (no such directory)" |
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126 | else |
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127 | PATH=$ARBHOME/bin:$PATH |
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128 | if [ !$?LD_LIBRARY_PATH ]; then |
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129 | LD_LIBRARY_PATH=$ARBHOME/lib |
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130 | fi |
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131 | LD_LIBRARY_PATH=$ARBHOME/lib:$LD_LIBRARY_PATH |
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132 | |
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133 | export ARBHOME PATH LD_LIBRARY_PATH |
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134 | |
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135 | cd $ARBHOME |
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136 | |
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137 | if [ "$REVISION" = "" ]; then |
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138 | UPDATE_ARGS= |
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139 | else |
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140 | UPDATE_ARGS="-r $REVISION" |
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141 | fi |
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142 | |
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143 | (upgrade && echo "ARB upgrade succeeded" && arbshell) || ( echo "Error: Something failed (see $LOG)" && false) |
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144 | fi |
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145 | fi |
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146 | |
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