| 1 | // =============================================================== // |
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| 2 | // // |
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| 3 | // File : GEN.hxx // |
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| 4 | // Purpose : // |
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| 5 | // // |
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| 6 | // Coded by Ralf Westram (coder@reallysoft.de) in January 2001 // |
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| 7 | // Institute of Microbiology (Technical University Munich) // |
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| 8 | // http://www.arb-home.de/ // |
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| 9 | // // |
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| 10 | // =============================================================== // |
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| 11 | |
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| 12 | #ifndef GEN_HXX |
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| 13 | #define GEN_HXX |
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| 14 | |
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| 15 | #ifndef AW_BASE_HXX |
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| 16 | #include <aw_base.hxx> |
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| 17 | #endif |
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| 18 | #ifndef ARBDB_BASE_H |
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| 19 | #include <arbdb_base.h> |
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| 20 | #endif |
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| 21 | #ifndef ITEMS_H |
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| 22 | #include <items.h> |
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| 23 | #endif |
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| 24 | |
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| 25 | // -------------------------------------------------------------------------------- |
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| 26 | // this header is visible ARB-wide (so here are only things needed somewhere else) |
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| 27 | // see GEN_local.hxx for local stuff |
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| 28 | // -------------------------------------------------------------------------------- |
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| 29 | |
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| 30 | // -------------------------------------------------------------------------------- |
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| 31 | // awars: |
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| 32 | |
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| 33 | #define AWAR_GENE_NAME "tmp/gene/name" |
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| 34 | |
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| 35 | void GEN_create_awars(AW_root *aw_root, AW_default aw_def, GBDATA *gb_main); |
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| 36 | |
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| 37 | // -------------------------------------------------------------------------------- |
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| 38 | // windows/menus: |
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| 39 | |
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| 40 | void GEN_popup_gene_infowindow(AW_root *aw_root, GBDATA *gb_main); |
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| 41 | AW_window *GEN_create_gene_query_window(AW_root *aw_root, GBDATA *gb_main); |
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| 42 | AW_window *GEN_create_first_map(AW_root *aw_root, GBDATA *gb_main); |
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| 43 | |
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| 44 | class AW_window_menu_modes; |
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| 45 | void GEN_create_genes_submenu(AW_window_menu_modes *awm, GBDATA *gb_main, bool for_ARB_NTREE); |
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| 46 | |
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| 47 | // -------------------------------------------------------------------------------- |
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| 48 | // genes: |
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| 49 | |
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| 50 | GBDATA* GEN_get_current_organism(GBDATA *gb_main, AW_root *aw_root); // uses AWAR_ORGANISM_NAME |
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| 51 | GBDATA* GEN_get_current_gene_data(GBDATA *gb_main, AW_root *aw_root); // uses AWAR_ORGANISM_NAME |
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| 52 | |
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| 53 | // -------------------------------------------------------------------------------- |
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| 54 | // toolkit: |
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| 55 | |
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| 56 | class AW_repeated_question; |
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| 57 | GB_ERROR GEN_testAndRemoveTranslations(GBDATA *gb_gene_data, void (*warn)(AW_CL cd, const char *msg), AW_CL cd, AW_repeated_question *ok_to_ignore_wrong_start_codon); |
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| 58 | |
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| 59 | ItemSelector& GEN_get_selector(); |
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| 60 | |
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| 61 | #else |
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| 62 | #error GEN.hxx included twice |
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| 63 | #endif // GEN_HXX |
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