source: trunk/HELP_SOURCE/source/gen_create.hlp

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UP      glossary.hlp
UP      gene_info.hlp

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#************* Title of helpfile !! and start of real helpfile ********
TITLE           Create Gene / Edit location

OCCURRENCE      ARB_NT/Genome/Gene Information/GENE/Create
                ARB_NT/Genome/Gene Information/FIELDS/Edit gene location

DESCRIPTION     Creates a new gene entry or edits the location of an existing gene entry.

                When creating a new gene, type a unique gene name into 'Gene'.

                To edit the location of the gene you may either
                - edit the 'Location' field or
                - edit the detailed fields in the lower part of the window.

                Changing any of them updates the other.

                The field 'Status' gives hints about the validity of the location.

                Certainty fields may contain

                          Character     Meaning
                          =             exact position
                          <             somewhere before position
                          >             somewhere behind position
                          +/-           directly behind/before position

                '+' and '-' are special and only allowed for locations like '7^8' (which marks the
                location between base number 7 and 8)

                When you are satisfied with the entered location, press 'Create gene'.

                In case of editing the location of an existing gene, the gene is updated everytime
                the location has a valid state. That allows an open ARB_EDIT4 which automatically
                searches and highlights the gene sequence.

EXAMPLES

        Example locations:

                10..15

                <10..>15

                join(10..15,20..350)

                join(10..15,complement(20..350))

                20^21
                

WARNINGS        None

BUGS            No bugs known