1 | #Please insert up references in the next lines (line starts with keyword UP) |
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2 | UP arb.hlp |
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3 | UP glossary.hlp |
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4 | |
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5 | #Please insert subtopic references (line starts with keyword SUB) |
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6 | SUB aci.hlp |
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7 | |
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8 | # Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain} |
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9 | |
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10 | #************* Title of helpfile !! and start of real helpfile ******** |
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11 | TITLE Define fields exported with gene species |
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12 | |
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13 | OCCURRENCE ARB_NT/Export/Export .. to new ARB database/Transfer Species/Source->Target/Define field transfer for gene species |
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14 | |
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15 | DESCRIPTION Here you can define which fields (of the origin organism or of the origin gene of |
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16 | a gene species) should be transferred to the new database and how they should be |
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17 | modified. |
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18 | |
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19 | To define a new transfer rule, do the following steps: |
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20 | |
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21 | - Enter name of created field |
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22 | |
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23 | - Choose a creation method |
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24 | |
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25 | If you choose 'Copy from organism/gene' you have to provide a 'Source field' |
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26 | and you MAY provide an ACI expression. |
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27 | |
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28 | If you choose 'Only use ACI' you have to provide an ACI expression, but |
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29 | no 'Source field'. |
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30 | |
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31 | - Check if the example shows your intended result. |
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32 | |
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33 | NOTES The example will be calculated for the gene-species which is selected |
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34 | in the left Hitlist of the 'TRANSFER SPECIES' window. |
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35 | |
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36 | The ACI expression applies to the Organism or the Gene if 'Copy from organism/gene' |
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37 | is selected. If 'Only use ACI' is selected it applies to the gene-species. |
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38 | |
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39 | Note that it is possible to create hierarchical keys. Simply enter something like |
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40 | 'organism/full_name' into the destination field. |
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41 | |
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42 | EXAMPLES None |
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43 | |
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44 | WARNINGS None |
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45 | |
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46 | BUGS When you export gene-species to a new database this database is marked as 'Arb-Genome-Database'. |
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47 | We need to implement some kind of Database-Admin-Tool to change the database type. |
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48 | |
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