source: trunk/HELP_SOURCE/source/resortbyother.hlp

#Please insert up references in the next lines (line starts with keyword UP)
UP      arb.hlp
UP      glossary.hlp

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#SUB    subtopic.hlp

# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}

#************* Title of helpfile !! and start of real helpfile ********
TITLE           Sort tree by other tree

OCCURRENCE      ARB_NT/Tree/Beautify tree/By other tree

DESCRIPTION     Works similar to LINK{resorttree.hlp}, but here branches are rearranged 
                according to the mean position of their leafs in another given tree.

                Select the tree you want to use as reference for ordering,
                then click 'Sort according to source tree' to apply the order to 
                the currently displayed tree (target tree).

NOTES           This also works fine when the source tree DOES NOT contain all species 
                of the target tree. Wherever the source tree does not define any ordering, 
                the order of the target tree is kept.

                This function is e.g. useful after you have added some species to a (copy of a) 
                tree and then have optimized the tree: now you may want to sort the copied tree 
                according to the original tree. That reduces the unwanted re-ordering caused by
                tree-optimization, without affecting the topology.

                If you call the function several times with different source trees, the last 
                call will be most dominant. Ordering effects of foregoing calls will 
                remain in tree-regions uncovered by source-trees used in subsequent calls.              

EXAMPLES        None

WARNINGS        None

BUGS            No bugs known