Changeset 1617
- Timestamp:
- 09/08/03 14:00:38 (9 years ago)
- Location:
- trunk
- Files:
-
- 66 modified
-
AISC/Makefile (modified) (3 diffs)
-
AISC_MKPTPS/Makefile (modified) (2 diffs)
-
ALEIO/Makefile (modified) (3 diffs)
-
ALIV3/Makefile (modified) (2 diffs)
-
ARBDB/Makefile (modified) (4 diffs)
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ARBDB2/Makefile (modified) (3 diffs)
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ARBDBPP/Makefile (modified) (7 diffs)
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ARBDBS/Makefile (modified) (3 diffs)
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ARBDB_COMPRESS/Makefile (modified) (6 diffs)
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ARB_GDE/Makefile (modified) (7 diffs)
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AWDEMO/Makefile (modified) (2 diffs)
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AWT/Makefile (modified) (24 diffs)
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AWTC/Makefile (modified) (7 diffs)
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AWTI/Makefile (modified) (4 diffs)
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CAT/Makefile (modified) (1 diff)
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CONSENSUS_TREE/Makefile (modified) (3 diffs)
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CONVERTALN/Makefile (modified) (2 diffs)
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DBSERVER/Makefile (modified) (2 diffs)
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DIST/Makefile (modified) (9 diffs)
-
EDIT/Makefile (modified) (1 diff)
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EDIT4/Makefile (modified) (23 diffs)
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EISPACK/Makefile (modified) (2 diffs)
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GDE/AxML/Makefile (modified) (3 diffs)
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GDE/CLUSTAL/Makefile (modified) (2 diffs)
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GDE/CLUSTALW/Makefile (modified) (1 diff)
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GDE/CORE/Makefile (modified) (4 diffs)
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GDE/FASTDNAML/Makefile (modified) (3 diffs)
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GDE/HGL_SRC/Makefile (modified) (4 diffs)
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GDE/LOOPTOOL/Makefile (modified) (2 diffs)
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GDE/MOLPHY/Makefile (modified) (4 diffs)
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GDE/Makefile (modified) (2 diffs)
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GDE/PHYLIP/Makefile (modified) (3 diffs)
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GDE/SUPPORT/Makefile (modified) (2 diffs)
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GDE/TREEPUZZLE/Makefile (modified) (2 diffs)
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GENOM/Makefile (modified) (11 diffs)
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HELP_SOURCE/Makefile (modified) (3 diffs)
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ISLAND_HOPPING/Makefile (modified) (2 diffs)
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MERGE/Makefile (modified) (11 diffs)
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MULTI_PROBE/Makefile (modified) (12 diffs)
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Makefile (modified) (9 diffs)
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NALIGNER/Makefile (modified) (10 diffs)
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NAMES/Makefile (modified) (1 diff)
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NAMES_COM/Makefile (modified) (1 diff)
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NTREE/Makefile (modified) (2 diffs)
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ORS_CGI/Makefile (modified) (13 diffs)
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ORS_COM/Makefile (modified) (1 diff)
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ORS_SERVER/Makefile (modified) (5 diffs)
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PARSIMONY/Makefile (modified) (10 diffs)
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PHYLO/Makefile (modified) (8 diffs)
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PRIMER_DESIGN/Makefile (modified) (4 diffs)
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PROBE/Makefile (modified) (7 diffs)
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PROBE_COM/Makefile (modified) (1 diff)
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PROBE_DESIGN/Makefile (modified) (2 diffs)
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PROBE_SET/Makefile (modified) (3 diffs)
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READSEQ/Makefile (modified) (2 diffs)
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SECEDIT/Makefile (modified) (6 diffs)
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SEER/Makefile (modified) (6 diffs)
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SEQ_QUALITY/Makefile (modified) (2 diffs)
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SERVERCNTRL/Makefile (modified) (2 diffs)
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STAT/Makefile (modified) (5 diffs)
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TEST/Makefile (modified) (3 diffs)
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TOOLS/Makefile (modified) (2 diffs)
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TRS/Makefile (modified) (3 diffs)
-
WETC/Makefile (modified) (2 diffs)
-
WINDOW/Makefile (modified) (2 diffs)
-
XML/Makefile (modified) (2 diffs)
Legend:
- Unmodified
- Added
- Removed
-
trunk/AISC/Makefile
r866 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .c 3 .SUFFIXES: .o .c .depend 4 4 OBJECTS = aisc.o aisc_commands.o aisc_var_ref.o aisc_mix.o 5 5 … … 12 12 $(CPP) $(cflags) -c $< $(AINCLUDES) 13 13 14 depend: 15 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.c) 14 DEPENDS = $(OBJECTS:.o=.depend) 15 depends: $(DEPENDS) 16 @cat $(DEPENDS) | grep -v '^#' >>Makefile 17 @rm $(DEPENDS) 18 $(DEPENDS): depend.init 19 depend.init: 20 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 21 .c.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 16 23 17 24 clean: … … 30 37 # DO NOT DELETE THIS LINE -- make depend depends on it. 31 38 32 aisc.o: aisc.h aisc_proto.h 33 aisc_commands.o: aisc.h aisc_proto.h 34 aisc_var_ref.o: aisc.h aisc_proto.h 35 aisc_mix.o: aisc.h aisc_proto.h 39 aisc.o: aisc.h aisc_proto.h 40 41 aisc_commands.o: aisc.h aisc_proto.h 42 43 aisc_var_ref.o: aisc.h aisc_proto.h 44 45 aisc_mix.o: aisc.h aisc_proto.h -
trunk/AISC_MKPTPS/Makefile
r866 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .c 3 .SUFFIXES: .o .c .depend 4 4 5 5 OBJECTS = mkptypes.o … … 11 11 $(ACC) $(cflags) -o $@ $(OBJECTS) 12 12 13 .c.o: 13 .c.o: 14 14 $(ACC) $(cflags) -c $< 15 15 16 depend: 17 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.c) 16 DEPENDS = $(OBJECTS:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 18 25 19 26 # DO NOT DELETE THIS LINE -- make depend depends on it. 20 27 21 mkptypes.o: 28 mkptypes.o: mkptypes.h patchlev.h -
trunk/ALEIO/Makefile
r887 r1617 3 3 OBJECT = io_arbdb.o getopt.o getopt1.o xmalloc.o lenstring.o careful.o 4 4 5 .SUFFIXES: .o .c . cxx5 .SUFFIXES: .o .c .depend 6 6 7 7 all: $(ARBHOME)/bin/arb_aleio … … 13 13 $(ACC) $(cflags) -c $< $(AINCLUDES) 14 14 15 depend: 16 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECT:.o=.c*) 15 DEPENDS = $(OBJECT:.o=.depend) 16 depends: $(DEPENDS) 17 @cat $(DEPENDS) | grep -v '^#' >>Makefile 18 @rm $(DEPENDS) 19 $(DEPENDS): depend.init 20 depend.init: 21 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 22 .c.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 17 24 18 25 # DO NOT DELETE THIS LINE -- make depend depends on it. … … 22 29 io_arbdb.o: $(ARBHOME)/INCLUDE/ad_prot.h 23 30 io_arbdb.o: $(ARBHOME)/INCLUDE/arbdbt.h 24 io_arbdb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ring.h getopt.h 25 io_arbdb.o: xmalloc.h lenstring.h hash.h careful.h 26 getopt1.o: getopt.h 27 xmalloc.o: xmalloc.h 28 lenstring.o: lenstring.h 29 lenstring.o: xmalloc.h 31 io_arbdb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ring.h getopt.h xmalloc.h 32 io_arbdb.o: lenstring.h hash.h careful.h 33 34 getopt.o: getopt.h 35 36 getopt1.o: getopt.h 37 38 xmalloc.o: xmalloc.h 39 40 lenstring.o: lenstring.h xmalloc.h -
trunk/ALIV3/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .c .cxx 3 .SUFFIXES: .o .c .cxx .depend 4 4 5 5 CPP_OBJECTS = a3.o a3_seq.o a3_ptree1.o a3_ptree2.o a3_helix.o a3_darray.o a3_ali.o a3_matrix.o a3_arbdb.o a3_bihelix.o 6 6 C_OBJECTS = a3_basen.o 7 OBJECTS = $(CPP_OBJECTS) $(C_OBJECTS) 7 8 8 $(MAIN): $( CPP_OBJECTS) $(C_OBJECTS)9 $(AR) $(MAIN) $( CPP_OBJECTS) $(C_OBJECTS)9 $(MAIN): $(OBJECTS) 10 $(AR) $(MAIN) $(OBJECTS) 10 11 11 .cxx.o: 12 .cxx.o: 12 13 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 13 14 … … 16 17 17 18 clean: 18 @-rm $(CPP_OBJECTS) $(C_OBJECTS) 19 depend: 20 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) $(C_OBJECTS:.o=.c) 19 @-rm $(OBJECTS) 20 21 DEPENDS = $(OBJECTS:.o=.depend) 22 depends: $(DEPENDS) 23 @cat $(DEPENDS) | grep -v '^#' >>Makefile 24 @rm $(DEPENDS) 25 $(DEPENDS): depend.init 26 depend.init: 27 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 28 .c.depend: 29 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 30 .cxx.depend: 31 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 32 22 33 # DO NOT DELETE THIS LINE -- make depend depends on it. 23 34 24 a3.o: a3_arbdb.hxx 25 a3.o: $(ARBHOME)/INCLUDE/arbdb.h 35 a3.o: a3_arbdb.hxx $(ARBHOME)/INCLUDE/arbdb.h 26 36 a3.o: $(ARBHOME)/INCLUDE/arb_assert.h 27 a3.o: $(ARBHOME)/INCLUDE/ad_prot.h 28 a3.o: $(ARBHOME)/INCLUDE/arbdbt.h 29 a3.o: $(ARBHOME)/INCLUDE/ad_t_prot.h a3_bihelix.hxx 30 a3.o: a3_ali.hxx a3_ptree.hxx a3_seq.hxx a3_types.h 31 a3.o: a3_helix.hxx a3_darray.hxx 32 a3_seq.o: a3_basen.h a3_seq.hxx 33 a3_seq.o: a3_types.h 34 a3_ptree1.o: a3_basen.h a3_ptree.hxx a3_seq.hxx 35 a3_ptree1.o: a3_types.h 36 a3_ptree2.o: a3_basen.h a3_ptree.hxx a3_seq.hxx 37 a3_ptree2.o: a3_types.h 37 a3.o: $(ARBHOME)/INCLUDE/ad_prot.h $(ARBHOME)/INCLUDE/arbdbt.h 38 a3.o: $(ARBHOME)/INCLUDE/ad_t_prot.h a3_bihelix.hxx a3_ali.hxx 39 a3.o: a3_ptree.hxx a3_seq.hxx a3_types.h a3_helix.hxx a3_darray.hxx 40 41 a3_seq.o: a3_basen.h a3_seq.hxx a3_types.h 42 43 a3_ptree1.o: a3_basen.h a3_ptree.hxx a3_seq.hxx a3_types.h 44 45 a3_ptree2.o: a3_basen.h a3_ptree.hxx a3_seq.hxx a3_types.h 46 38 47 a3_helix.o: a3_helix.hxx a3_types.h a3_darray.hxx a3_ali.hxx a3_ptree.hxx 39 48 a3_helix.o: a3_seq.hxx a3_matrix.hxx 40 a3_darray.o: a3_darray.hxx 41 a3_ali.o: a3_ali.hxx 42 a3_ali.o: a3_ptree.hxx a3_seq.hxx a3_types.h a3_helix.hxx a3_darray.hxx 49 50 a3_darray.o: a3_darray.hxx 51 52 a3_ali.o: a3_ali.hxx a3_ptree.hxx a3_seq.hxx a3_types.h a3_helix.hxx 53 a3_ali.o: a3_darray.hxx 54 43 55 a3_matrix.o: a3_matrix.hxx a3_darray.hxx 44 a3_arbdb.o: a3_arbdb.hxx 45 a3_arbdb.o: $(ARBHOME)/INCLUDE/arbdb.h56 57 a3_arbdb.o: a3_arbdb.hxx $(ARBHOME)/INCLUDE/arbdb.h 46 58 a3_arbdb.o: $(ARBHOME)/INCLUDE/arb_assert.h 47 59 a3_arbdb.o: $(ARBHOME)/INCLUDE/ad_prot.h 48 60 a3_arbdb.o: $(ARBHOME)/INCLUDE/arbdbt.h 49 61 a3_arbdb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 50 a3_bihelix.o: a3_bihelix.hxx 51 a3_bihelix.o: a3_ arbdb.hxx $(ARBHOME)/INCLUDE/arbdb.h62 63 a3_bihelix.o: a3_bihelix.hxx a3_arbdb.hxx $(ARBHOME)/INCLUDE/arbdb.h 52 64 a3_bihelix.o: $(ARBHOME)/INCLUDE/arb_assert.h 53 65 a3_bihelix.o: $(ARBHOME)/INCLUDE/ad_prot.h 54 66 a3_bihelix.o: $(ARBHOME)/INCLUDE/arbdbt.h 55 67 a3_bihelix.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 68 56 69 a3_basen.o: a3_basen.h -
trunk/ARBDB/Makefile
r1493 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cxx 2 .SUFFIXES: .o .c .cxx .depend 3 3 4 4 include AD_MOBJECTS.h … … 20 20 rm -f ad_lpro.h 21 21 ../MAKEBIN/aisc_mkpt -g -z -C -F gb $(GB_O:.o=.c) >ad_lpro.h 22 # ../MAKEBIN/aisc_mkpt $(GB_O:.o=.c) |awk '$$2 ~ /gb/ {print;}' >ad_lpro.h23 22 24 23 tlpro: $(GB_T:.o=.c) 25 24 rm -f ad_t_lpro.h 26 25 ../MAKEBIN/aisc_mkpt -g -z -C -F gb $(GB_T:.o=.c) >ad_t_lpro.h 27 # ../MAKEBIN/aisc_mkpt $(GB_T:.o=.c) |awk '$$2 ~ /gb/ {print;}' >ad_t_lpro.h28 26 29 27 … … 31 29 rm -f ad_prot.h 32 30 ../MAKEBIN/aisc_mkpt -g -z -C -F GB $(GB_O:.o=.c) >ad_prot.h 33 # ../MAKEBIN/aisc_mkpt $(GB_O:.o=.c) |awk '$$2 ~ /GB/ {print;}' >ad_prot.h34 31 35 32 tpro: $(GB_T:.o=.c) 36 33 rm -f ad_t_prot.h 37 34 ../MAKEBIN/aisc_mkpt -g -z -C -F GB $(GB_T:.o=.c) >ad_t_prot.h 38 # ../MAKEBIN/aisc_mkpt $(GB_T:.o=.c) |awk '$$2 ~ /GB/ {print;}' >ad_t_prot.h39 35 40 36 wc: … … 46 42 /usr/5bin/touch 0101010192 ad_lpro.h ad_t_lpro.h 47 43 48 depend: 49 $(MAKEDEPEND) $(MAKEDEPENDINC) *.c *.cxx 44 DEPENDS = $(OBJECTS:.o=.depend) 45 depends: $(DEPENDS) 46 @cat $(DEPENDS) | grep -v '^#' >>Makefile 47 @rm $(DEPENDS) 48 $(DEPENDS): depend.init 49 depend.init: 50 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 51 .c.depend: 52 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 53 .cxx.depend: 54 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 55 50 56 # DO NOT DELETE THIS LINE -- make depend depends on it. 51 57 52 adGene.o: adGene.h arbdb.h ./arb_assert.h 53 adGene.o: ./ad_prot.h arbdbt.h ./ad_t_prot.h 54 adReference.o: arbdb.h 55 adReference.o: ./arb_assert.h ./ad_prot.h adlocal.h adtune.h adlmacros.h 56 adRevCompl.o: arbdb.h 57 adRevCompl.o: ./arb_assert.h 58 adRevCompl.o: ./ad_prot.h arbdbt.h 59 adRevCompl.o: ./ad_t_prot.h 60 adTest.o: adlocal.h adtune.h 58 adsort.o: arbdb.h arb_assert.h ad_prot.h arbdbt.h ad_t_prot.h 59 60 adlang1.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 61 adlang1.o: adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h adGene.h 62 63 adstring.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 64 adstring.o: adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 65 66 arbdb.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 67 arbdb.o: adlmacros.h 68 69 ad_core.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 70 ad_core.o: adlmacros.h 71 72 admath.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 73 admath.o: adlmacros.h 74 75 adoptimize.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h 76 adoptimize.o: adtune.h adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 77 78 adsystem.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 79 adsystem.o: adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 80 81 adindex.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 82 adindex.o: adlmacros.h adlundo.h 83 84 adperl.o: arbdb.h arb_assert.h ad_prot.h 85 86 adlink.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 87 adlink.o: adlmacros.h 88 89 adsocket.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 90 adsocket.o: adlmacros.h 91 92 adcomm.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 93 adcomm.o: adlmacros.h 94 95 adhash.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 96 adhash.o: adlmacros.h 97 98 adquery.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 99 adquery.o: adlmacros.h 100 101 ad_save_load.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h 102 ad_save_load.o: adtune.h adlmacros.h admap.h 103 104 adcompr.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 105 adcompr.o: adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 106 107 admalloc.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 108 admalloc.o: adlmacros.h 109 110 ad_load.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 111 ad_load.o: adlmacros.h admap.h 112 113 admap.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 114 admap.o: adlmacros.h admap.h 115 116 adTest.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 61 117 adTest.o: adlmacros.h admap.h 62 ad_core.o: adlocal.h adtune.h adlmacros.h 63 ad_load.o: adlocal.h 64 ad_load.o: adtune.h adlmacros.h admap.h 65 ad_save_load.o: adlocal.h adtune.h adlmacros.h 66 ad_save_load.o: admap.h 67 adcomm.o: adlocal.h adtune.h adlmacros.h 68 adcompr.o: adlocal.h adtune.h 69 adcompr.o: adlmacros.h arbdbt.h ./ad_t_prot.h 70 adhash.o: adlocal.h adtune.h adlmacros.h 71 adindex.o: adlocal.h 72 adindex.o: adtune.h adlmacros.h adlundo.h 73 adlang1.o: adlocal.h adtune.h adlmacros.h arbdbt.h 74 adlang1.o: ./ad_t_prot.h adGene.h arbdb.h ./arb_assert.h ./ad_prot.h 75 adlink.o: adlocal.h adtune.h adlmacros.h arbdb.h 76 adlink.o: ./arb_assert.h ./ad_prot.h 77 admalloc.o: adlocal.h adtune.h adlmacros.h 78 admap.o: adlocal.h adtune.h adlmacros.h admap.h 79 admath.o: adlocal.h 80 admath.o: adtune.h adlmacros.h 81 adoptimize.o: adlocal.h adtune.h adlmacros.h 82 adoptimize.o: arbdbt.h ./ad_t_prot.h 83 adperl.o: arbdb.h ./arb_assert.h ./ad_prot.h 84 adquery.o: adlocal.h adtune.h adlmacros.h 85 adseqcompr.o: adlocal.h adtune.h adlmacros.h arbdb.h 86 adseqcompr.o: ./arb_assert.h ./ad_prot.h arbdbt.h ./ad_t_prot.h adseqcompr.h 87 adsocket.o: adlocal.h 88 adsocket.o: adtune.h adlmacros.h 89 adsort.o: arbdb.h ./arb_assert.h 90 adsort.o: ./ad_prot.h arbdbt.h ./ad_t_prot.h 91 adstring.o: adlocal.h adtune.h adlmacros.h arbdbt.h 92 adstring.o: ./ad_t_prot.h 93 adsystem.o: adlocal.h adtune.h adlmacros.h 94 adsystem.o: arbdbt.h ./ad_t_prot.h 95 adtables.o: adlocal.h adtune.h adlmacros.h arbdb.h 96 adtables.o: ./arb_assert.h ./ad_prot.h arbdbt.h ./ad_t_prot.h 97 adtools.o: adlocal.h adtune.h adlmacros.h arbdb.h 98 adtools.o: ./arb_assert.h ./ad_prot.h arbdbt.h ./ad_t_prot.h 118 99 119 adtune.o: adtune.h 100 arbdb.o: adlocal.h adtune.h 101 arbdb.o: adlmacros.h arbdb.h ./arb_assert.h ./ad_prot.h 102 arbdbpp.o: arbdb.h ./arb_assert.h ./ad_prot.h 103 arbdbpp.o: arbdbt.h ./ad_t_prot.h 120 121 adGene.o: adGene.h arbdb.h arb_assert.h ad_prot.h arbdbt.h ad_t_prot.h 122 123 adtools.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 124 adtools.o: adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 125 126 adseqcompr.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h 127 adseqcompr.o: adtune.h adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 128 adseqcompr.o: adseqcompr.h 129 130 adtables.o: adlocal.h arb_assert.h arbdb.h ad_prot.h ad_lpro.h adtune.h 131 adtables.o: adlmacros.h arbdbt.h ad_t_prot.h ad_t_lpro.h 132 133 adRevCompl.o: arbdb.h arb_assert.h ad_prot.h arbdbt.h ad_t_prot.h 134 135 arbdbpp.o: arbdb.h arb_assert.h ad_prot.h arbdbt.h ad_t_prot.h -
trunk/ARBDB2/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c 2 .SUFFIXES: .o .c .depend 3 3 4 4 include AD_MOBJECTS.h … … 12 12 $(CCLIB) $(cflags) -c $< $(AINCLUDES) 13 13 14 depend: 15 $(MAKEDEPEND) $(MAKEDEPENDINC) $(ACC_OBJECTS:.o=.c) 14 DEPENDS = $(ACC_OBJECTS:.o=.depend) 15 depends: $(DEPENDS) 16 @cat $(DEPENDS) | grep -v '^#' >>Makefile 17 @rm $(DEPENDS) 18 $(DEPENDS): depend.init 19 depend.init: 20 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 21 .c.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 16 24 links: 17 25 ln -s ../ARBDB/*.[ch] . … … 19 27 # DO NOT DELETE THIS LINE -- make depend depends on it. 20 28 21 adsort.o: arbdb.h 22 adsort.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 23 adsort.o: arbdbt.h ./ad_t_prot.h 24 adlang1.o: adlocal.h 25 adlang1.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 26 adlang1.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h adGene.h 27 adstring.o: adlocal.h 28 adstring.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 29 adstring.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 30 arbdb.o: adlocal.h 31 arbdb.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 32 arbdb.o: ./ad_prot.h adtune.h adlmacros.h 33 ad_core.o: adlocal.h 34 ad_core.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 35 ad_core.o: ./ad_prot.h adtune.h adlmacros.h 36 admath.o: adlocal.h 37 admath.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 38 admath.o: ./ad_prot.h adtune.h adlmacros.h 39 adoptimize.o: adlocal.h 40 adoptimize.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 41 adoptimize.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 42 adsystem.o: adlocal.h 43 adsystem.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 44 adsystem.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 45 adindex.o: adlocal.h 46 adindex.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 47 adindex.o: ./ad_prot.h adtune.h adlmacros.h adlundo.h 48 adperl.o: arbdb.h 49 adperl.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 50 adlink.o: adlocal.h 51 adlink.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 52 adlink.o: ./ad_prot.h adtune.h adlmacros.h 53 adsocket.o: adlocal.h 54 adsocket.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 55 adsocket.o: ./ad_prot.h adtune.h adlmacros.h 56 adcomm.o: adlocal.h 57 adcomm.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 58 adcomm.o: ./ad_prot.h adtune.h adlmacros.h 59 adhash.o: adlocal.h 60 adhash.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 61 adhash.o: ./ad_prot.h adtune.h adlmacros.h 62 adquery.o: adlocal.h 63 adquery.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 64 adquery.o: ./ad_prot.h adtune.h adlmacros.h 65 ad_save_load.o: adlocal.h 66 ad_save_load.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 67 ad_save_load.o: ./ad_prot.h adtune.h adlmacros.h admap.h 68 adcompr.o: adlocal.h 69 adcompr.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 70 adcompr.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 71 admalloc.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h 72 admalloc.o: arbdb.h ./ad_prot.h adtune.h adlmacros.h 73 ad_load.o: adlocal.h 74 ad_load.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 75 ad_load.o: ./ad_prot.h adtune.h adlmacros.h admap.h 76 admap.o: adlocal.h 77 admap.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 78 admap.o: ./ad_prot.h adtune.h adlmacros.h admap.h 79 adTest.o: adlocal.h 80 adTest.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 81 adTest.o: ./ad_prot.h adtune.h adlmacros.h admap.h 29 adsort.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h arbdbt.h 30 adsort.o: ad_t_prot.h 31 32 adlang1.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 33 adlang1.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 34 adlang1.o: ad_t_prot.h ad_t_lpro.h adGene.h 35 36 adstring.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 37 adstring.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 38 adstring.o: ad_t_prot.h ad_t_lpro.h 39 40 arbdb.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h ad_prot.h 41 arbdb.o: ad_lpro.h adtune.h adlmacros.h 42 43 ad_core.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 44 ad_core.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 45 46 admath.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 47 admath.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 48 49 adoptimize.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 50 adoptimize.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 51 adoptimize.o: ad_t_prot.h ad_t_lpro.h 52 53 adsystem.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 54 adsystem.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 55 adsystem.o: ad_t_prot.h ad_t_lpro.h 56 57 adindex.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 58 adindex.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h adlundo.h 59 60 adperl.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 61 62 adlink.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 63 adlink.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 64 65 adsocket.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 66 adsocket.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 67 68 adcomm.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 69 adcomm.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 70 71 adhash.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 72 adhash.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 73 74 adquery.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 75 adquery.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 76 77 ad_save_load.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 78 ad_save_load.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h admap.h 79 80 adcompr.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 81 adcompr.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 82 adcompr.o: ad_t_prot.h ad_t_lpro.h 83 84 admalloc.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 85 admalloc.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 86 87 ad_load.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 88 ad_load.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h admap.h 89 90 admap.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h ad_prot.h 91 admap.o: ad_lpro.h adtune.h adlmacros.h admap.h 92 93 adTest.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 94 adTest.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h admap.h 95 82 96 adtune.o: adtune.h 83 adGene.o: adGene.h arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h 84 adGene.o: ./ad_prot.h arbdbt.h ./ad_t_prot.h 85 adtools.o: adlocal.h 86 adtools.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 87 adtools.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 88 adseqcompr.o: adlocal.h 89 adseqcompr.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 90 adseqcompr.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 91 adseqcompr.o: adseqcompr.h 92 adtables.o: adlocal.h 93 adtables.o: $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 94 adtables.o: ./ad_prot.h adtune.h adlmacros.h arbdbt.h ./ad_t_prot.h 95 adRevCompl.o: arbdb.h 96 adRevCompl.o: $(ARBHOME)/INCLUDE/arb_assert.h 97 adRevCompl.o: ./ad_prot.h arbdbt.h 98 adRevCompl.o: ./ad_t_prot.h 97 98 adGene.o: adGene.h arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 99 adGene.o: arbdbt.h ad_t_prot.h 100 101 adtools.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 102 adtools.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 103 adtools.o: ad_t_prot.h ad_t_lpro.h 104 105 adseqcompr.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 106 adseqcompr.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 107 adseqcompr.o: ad_t_prot.h ad_t_lpro.h adseqcompr.h 108 109 adtables.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 110 adtables.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 111 adtables.o: ad_t_prot.h ad_t_lpro.h 112 113 adRevCompl.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 114 adRevCompl.o: arbdbt.h ad_t_prot.h -
trunk/ARBDBPP/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cxx 3 CPP_OBJECTS = adtsequence.o adt_edit.o adtali.o adextended.o adseq.o adspecies.o admain.o adali.o liste.o 2 .SUFFIXES: .o .c .cxx .depend 3 CPP_OBJECTS = adtsequence.o adt_edit.o adtali.o adextended.o adseq.o adspecies.o admain.o adali.o liste.o 4 4 $(MAIN): $(CPP_OBJECTS) 5 5 $(ARLIB) $(@:.a=).$(SHARED_LIB_SUFFIX) $(CPP_OBJECTS) 6 6 touch $@ 7 .cxx.o: 7 .cxx.o: 8 8 $(CCPLIB) $(cflags) -c $< $(CPPINCLUDES) 9 depend: 10 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 9 10 DEPENDS = $(CPP_OBJECTS:.o=.depend) 11 depends: $(DEPENDS) 12 @cat $(DEPENDS) | grep -v '^#' >>Makefile 13 @rm $(DEPENDS) 14 $(DEPENDS): depend.init 15 depend.init: 16 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 17 .c.depend: 18 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 19 .cxx.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 11 22 # DO NOT DELETE THIS LINE -- make depend depends on it. 12 23 … … 15 26 adtsequence.o: $(ARBHOME)/INCLUDE/ad_prot.h arbdb++.hxx 16 27 adtsequence.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx adtools.hxx 28 17 29 adt_edit.o: $(ARBHOME)/INCLUDE/arbdb.h 18 30 adt_edit.o: $(ARBHOME)/INCLUDE/arb_assert.h 19 31 adt_edit.o: $(ARBHOME)/INCLUDE/ad_prot.h arbdb++.hxx 20 32 adt_edit.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx adtools.hxx 33 21 34 adtali.o: $(ARBHOME)/INCLUDE/arbdb.h 22 35 adtali.o: $(ARBHOME)/INCLUDE/arb_assert.h 23 adtali.o: $(ARBHOME)/INCLUDE/ad_prot.h adtools.hxx 24 adtali.o: arbdb++.hxx $(ARBHOME)/INCLUDE/aw_keysym.hxx 36 adtali.o: $(ARBHOME)/INCLUDE/ad_prot.h adtools.hxx arbdb++.hxx 37 adtali.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 38 25 39 adextended.o: $(ARBHOME)/INCLUDE/arbdb.h 26 40 adextended.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 29 43 adextended.o: $(ARBHOME)/INCLUDE/ad_t_prot.h arbdb++.hxx 30 44 adextended.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 45 31 46 adseq.o: $(ARBHOME)/INCLUDE/arbdb.h 32 47 adseq.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 35 50 adseq.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 36 51 adseq.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx arbdb++.hxx 52 37 53 adspecies.o: $(ARBHOME)/INCLUDE/arbdb.h 38 54 adspecies.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 41 57 adspecies.o: $(ARBHOME)/INCLUDE/ad_t_prot.h arbdb++.hxx 42 58 adspecies.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 43 admain.o: $(ARBHOME)/INCLUDE/arbdb.h 59 60 admain.o: $(ARBHOME)/INCLUDE/arbdb.h 44 61 admain.o: $(ARBHOME)/INCLUDE/arb_assert.h 45 62 admain.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 47 64 admain.o: $(ARBHOME)/INCLUDE/ad_t_prot.h arbdb++.hxx 48 65 admain.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 49 adali.o: $(ARBHOME)/INCLUDE/arbdb.h 66 67 adali.o: $(ARBHOME)/INCLUDE/arbdb.h 50 68 adali.o: $(ARBHOME)/INCLUDE/arb_assert.h 51 69 adali.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 53 71 adali.o: $(ARBHOME)/INCLUDE/ad_t_prot.h arbdb++.hxx 54 72 adali.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 73 55 74 liste.o: $(ARBHOME)/INCLUDE/arbdb.h 56 75 liste.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/ARBDBS/Makefile
r1493 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cxx 2 .SUFFIXES: .o .c .cxx .depend 3 3 4 4 include AD_MOBJECTS.h … … 13 13 .cxx.o: 14 14 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 15 depend: 16 $(MAKEDEPEND) $(MAKEDEPENDINC) *.c *.cxx 15 16 DEPENDS = $(OBJECTS:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 .cxx.depend: 26 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 27 17 28 links: 18 29 ln -s ../ARBDB/*.[ch] . … … 20 31 # DO NOT DELETE THIS LINE -- make depend depends on it. 21 32 22 adGene.o: adGene.h arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h 23 adGene.o: ./ad_prot.h arbdbt.h ./ad_t_prot.h 24 adReference.o: arbdb.h 25 adReference.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 26 adReference.o: adlocal.h adtune.h adlmacros.h 27 adRevCompl.o: arbdb.h 28 adRevCompl.o: $(ARBHOME)/INCLUDE/arb_assert.h 29 adRevCompl.o: ./ad_prot.h arbdbt.h 30 adRevCompl.o: ./ad_t_prot.h 31 adTest.o: adlocal.h adtune.h 32 adTest.o: adlmacros.h admap.h 33 ad_core.o: adlocal.h adtune.h adlmacros.h 34 ad_load.o: adlocal.h 35 ad_load.o: adtune.h adlmacros.h admap.h 36 ad_save_load.o: adlocal.h adtune.h adlmacros.h 37 ad_save_load.o: admap.h 38 adcomm.o: adlocal.h adtune.h adlmacros.h 39 adcompr.o: adlocal.h adtune.h 40 adcompr.o: adlmacros.h arbdbt.h ./ad_t_prot.h 41 adhash.o: adlocal.h adtune.h adlmacros.h 42 adindex.o: adlocal.h 43 adindex.o: adtune.h adlmacros.h adlundo.h 44 adlang1.o: adlocal.h adtune.h adlmacros.h arbdbt.h 45 adlang1.o: ./ad_t_prot.h adGene.h arbdb.h 46 adlang1.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 47 adlink.o: adlocal.h adtune.h adlmacros.h arbdb.h 48 adlink.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 49 admalloc.o: adlocal.h adtune.h adlmacros.h 50 admap.o: adlocal.h adtune.h adlmacros.h admap.h 51 admath.o: adlocal.h 52 admath.o: adtune.h adlmacros.h 53 adoptimize.o: adlocal.h adtune.h adlmacros.h 54 adoptimize.o: arbdbt.h ./ad_t_prot.h 55 adperl.o: arbdb.h 56 adperl.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 57 adquery.o: adlocal.h adtune.h adlmacros.h 58 adseqcompr.o: adlocal.h adtune.h adlmacros.h arbdb.h 59 adseqcompr.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 60 adseqcompr.o: arbdbt.h ./ad_t_prot.h adseqcompr.h 61 adsocket.o: adlocal.h 62 adsocket.o: adtune.h adlmacros.h 63 adsort.o: arbdb.h 64 adsort.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 65 adsort.o: arbdbt.h ./ad_t_prot.h 66 adstring.o: adlocal.h adtune.h adlmacros.h arbdbt.h 67 adstring.o: ./ad_t_prot.h 68 adsystem.o: adlocal.h adtune.h adlmacros.h 69 adsystem.o: arbdbt.h ./ad_t_prot.h 70 adtables.o: adlocal.h adtune.h adlmacros.h arbdb.h 71 adtables.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 72 adtables.o: arbdbt.h ./ad_t_prot.h 73 adtools.o: adlocal.h adtune.h adlmacros.h arbdb.h 74 adtools.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 75 adtools.o: arbdbt.h ./ad_t_prot.h 33 adsort.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h arbdbt.h 34 adsort.o: ad_t_prot.h 35 36 adlang1.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 37 adlang1.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 38 adlang1.o: ad_t_prot.h ad_t_lpro.h adGene.h 39 40 adstring.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 41 adstring.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 42 adstring.o: ad_t_prot.h ad_t_lpro.h 43 44 arbdb.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h ad_prot.h 45 arbdb.o: ad_lpro.h adtune.h adlmacros.h 46 47 ad_core.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 48 ad_core.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 49 50 admath.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 51 admath.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 52 53 adoptimize.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 54 adoptimize.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 55 adoptimize.o: ad_t_prot.h ad_t_lpro.h 56 57 adsystem.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 58 adsystem.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 59 adsystem.o: ad_t_prot.h ad_t_lpro.h 60 61 adindex.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 62 adindex.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h adlundo.h 63 64 adperl.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 65 66 adlink.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 67 adlink.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 68 69 adsocket.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 70 adsocket.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 71 72 adcomm.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 73 adcomm.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 74 75 adhash.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 76 adhash.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 77 78 adquery.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 79 adquery.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 80 81 ad_save_load.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 82 ad_save_load.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h admap.h 83 84 adcompr.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 85 adcompr.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 86 adcompr.o: ad_t_prot.h ad_t_lpro.h 87 88 admalloc.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 89 admalloc.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h 90 91 ad_load.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 92 ad_load.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h admap.h 93 94 admap.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h ad_prot.h 95 admap.o: ad_lpro.h adtune.h adlmacros.h admap.h 96 97 adTest.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 98 adTest.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h admap.h 99 76 100 adtune.o: adtune.h 77 arbdb.o: adlocal.h adtune.h 78 arbdb.o: adlmacros.h arbdb.h 79 arbdb.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 80 arbdbpp.o: arbdb.h 81 arbdbpp.o: $(ARBHOME)/INCLUDE/arb_assert.h ./ad_prot.h 82 arbdbpp.o: arbdbt.h ./ad_t_prot.h 101 102 adGene.o: adGene.h arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 103 adGene.o: arbdbt.h ad_t_prot.h 104 105 adtools.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 106 adtools.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 107 adtools.o: ad_t_prot.h ad_t_lpro.h 108 109 adseqcompr.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 110 adseqcompr.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 111 adseqcompr.o: ad_t_prot.h ad_t_lpro.h adseqcompr.h 112 113 adtables.o: adlocal.h $(ARBHOME)/INCLUDE/arb_assert.h arbdb.h 114 adtables.o: ad_prot.h ad_lpro.h adtune.h adlmacros.h arbdbt.h 115 adtables.o: ad_t_prot.h ad_t_lpro.h 116 117 adRevCompl.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 118 adRevCompl.o: arbdbt.h ad_t_prot.h 119 120 arbdbpp.o: arbdb.h $(ARBHOME)/INCLUDE/arb_assert.h ad_prot.h 121 arbdbpp.o: arbdbt.h ad_t_prot.h -
trunk/ARBDB_COMPRESS/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cxx 2 .SUFFIXES: .o .c .cxx .depend 3 3 4 4 OBJECTS = AC_main.o AC_tree.o AC_sequence.o DEBUG_tools.o AC_toys_n_tools.o … … 7 7 $(AR) $(MAIN) $(OBJECTS) 8 8 9 AC_sequence.o: AC_sequence.cxx 9 AC_sequence.o: AC_sequence.cxx 10 10 CC -O $(cflags) -c $< $(CPPINCLUDES) 11 11 12 .cxx.o: 12 .cxx.o: 13 13 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 14 14 15 depend: 16 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx) 15 DEPENDS = $(OBJECTS:.o=.depend) 16 depends: $(DEPENDS) 17 @cat $(DEPENDS) | grep -v '^#' >>Makefile 18 @rm $(DEPENDS) 19 $(DEPENDS): depend.init 20 depend.init: 21 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 22 .c.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 .cxx.depend: 25 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 26 17 27 # DO NOT DELETE THIS LINE -- make depend depends on it. 18 28 … … 22 32 AC_main.o: $(ARBHOME)/INCLUDE/arbdbt.h 23 33 AC_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ac.hxx 34 24 35 AC_tree.o: $(ARBHOME)/INCLUDE/arbdb.h 25 36 AC_tree.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 27 38 AC_tree.o: $(ARBHOME)/INCLUDE/arbdbt.h 28 39 AC_tree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ac.hxx 40 29 41 AC_sequence.o: $(ARBHOME)/INCLUDE/arbdb.h 30 42 AC_sequence.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 32 44 AC_sequence.o: $(ARBHOME)/INCLUDE/arbdbt.h 33 45 AC_sequence.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ac.hxx 46 34 47 DEBUG_tools.o: $(ARBHOME)/INCLUDE/arbdb.h 35 48 DEBUG_tools.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 37 50 DEBUG_tools.o: $(ARBHOME)/INCLUDE/arbdbt.h 38 51 DEBUG_tools.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ac.hxx 52 39 53 AC_toys_n_tools.o: $(ARBHOME)/INCLUDE/arbdb.h 40 54 AC_toys_n_tools.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/ARB_GDE/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 4 CPP_OBJECTS = GDE_ParseMenu.o GDE.o GDE_event.o \ 4 5 GDE_arbdb_io.o GDE_HGLfile.o\ 5 GDE_Genbank.o GDE_FileIO.o 6 GDE_Genbank.o GDE_FileIO.o 7 6 8 $(MAIN): $(CPP_OBJECTS) 7 9 $(AR) $(MAIN) $(CPP_OBJECTS) 8 .cxx.o: 10 .cxx.o: 9 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 depend: 11 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 12 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 12 25 # DO NOT DELETE THIS LINE -- make depend depends on it. 13 26 … … 18 31 GDE_ParseMenu.o: $(ARBHOME)/INCLUDE/aw_device.hxx 19 32 GDE_ParseMenu.o: $(ARBHOME)/INCLUDE/aw_window.hxx 20 GDE_ParseMenu.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx 21 GDE_ParseMenu.o: GDE_menu.h GDE_def.h GDE_global.h GDE_extglob.h 22 GDE.o: $(ARBHOME)/INCLUDE/arbdb.h 33 GDE_ParseMenu.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_menu.h 34 GDE_ParseMenu.o: GDE_def.h GDE_global.h GDE_extglob.h 35 36 GDE.o: $(ARBHOME)/INCLUDE/arbdb.h 23 37 GDE.o: $(ARBHOME)/INCLUDE/arb_assert.h 24 GDE.o: $(ARBHOME)/INCLUDE/ad_prot.h 25 GDE.o: $(ARBHOME)/INCLUDE/arbdbt.h 38 GDE.o: $(ARBHOME)/INCLUDE/ad_prot.h $(ARBHOME)/INCLUDE/arbdbt.h 26 39 GDE.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 27 40 GDE.o: $(ARBHOME)/INCLUDE/aw_root.hxx 28 41 GDE.o: $(ARBHOME)/INCLUDE/aw_device.hxx 29 42 GDE.o: $(ARBHOME)/INCLUDE/aw_window.hxx 30 GDE.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_menu.h 31 GDE.o: GDE_def.h GDE_extglob.h 43 GDE.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_menu.h GDE_def.h 44 GDE.o: GDE_extglob.h 45 32 46 GDE_event.o: $(ARBHOME)/INCLUDE/arbdb.h 33 47 GDE_event.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 43 57 GDE_event.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx gde.hxx 44 58 GDE_event.o: GDE_menu.h GDE_def.h GDE_extglob.h 59 45 60 GDE_arbdb_io.o: $(ARBHOME)/INCLUDE/arbdb.h 46 61 GDE_arbdb_io.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 55 70 GDE_arbdb_io.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 56 71 GDE_arbdb_io.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 57 GDE_arbdb_io.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 58 GDE_arbdb_io.o: gde.hxx GDE_def.h GDE_menu.h GDE_extglob.h 72 GDE_arbdb_io.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx gde.hxx 73 GDE_arbdb_io.o: GDE_def.h GDE_menu.h GDE_extglob.h 74 59 75 GDE_HGLfile.o: $(ARBHOME)/INCLUDE/arbdb.h 60 76 GDE_HGLfile.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 63 79 GDE_HGLfile.o: $(ARBHOME)/INCLUDE/aw_device.hxx 64 80 GDE_HGLfile.o: $(ARBHOME)/INCLUDE/aw_window.hxx 65 GDE_HGLfile.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx 66 GDE_HGLfile.o: GDE_menu.h GDE_def.h GDE_extglob.h 81 GDE_HGLfile.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_menu.h GDE_def.h 82 GDE_HGLfile.o: GDE_extglob.h 83 67 84 GDE_Genbank.o: $(ARBHOME)/INCLUDE/arbdb.h 68 85 GDE_Genbank.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 71 88 GDE_Genbank.o: $(ARBHOME)/INCLUDE/aw_device.hxx 72 89 GDE_Genbank.o: $(ARBHOME)/INCLUDE/aw_window.hxx 73 GDE_Genbank.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx 74 GDE_Genbank.o: GDE_menu.h GDE_def.h GDE_extglob.h 90 GDE_Genbank.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_menu.h GDE_def.h 91 GDE_Genbank.o: GDE_extglob.h 92 75 93 GDE_FileIO.o: $(ARBHOME)/INCLUDE/arbdb.h 76 94 GDE_FileIO.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 81 99 GDE_FileIO.o: $(ARBHOME)/INCLUDE/aw_device.hxx 82 100 GDE_FileIO.o: $(ARBHOME)/INCLUDE/aw_window.hxx 83 GDE_FileIO.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_def.h 84 GDE_FileIO.o: GDE_ menu.h GDE_extglob.h101 GDE_FileIO.o: $(ARBHOME)/INCLUDE/awt.hxx gde.hxx GDE_def.h GDE_menu.h 102 GDE_FileIO.o: GDE_extglob.h -
trunk/AWDEMO/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 CPP_OBJECTS = demo.o 4 4 $(MAIN): $(CPP_OBJECTS) 5 5 $(AR) $(MAIN) $(CPP_OBJECTS) 6 .cxx.o: 6 .cxx.o: 7 7 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 8 depend: 9 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 8 9 DEPENDS = $(CPP_OBJECTS:.o=.depend) 10 depends: $(DEPENDS) 11 @cat $(DEPENDS) | grep -v '^#' >>Makefile 12 @rm $(DEPENDS) 13 $(DEPENDS): depend.init 14 depend.init: 15 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 16 .c.depend: 17 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 18 .cxx.depend: 19 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 20 10 21 # DO NOT DELETE THIS LINE -- make depend depends on it. 11 22 … … 14 25 demo.o: $(ARBHOME)/INCLUDE/aw_device.hxx 15 26 demo.o: $(ARBHOME)/INCLUDE/aw_window.hxx 16 demo.o: $(ARBHOME)/INCLUDE/aw_preset.hxx ./demo.hxx27 demo.o: $(ARBHOME)/INCLUDE/aw_preset.hxx demo.hxx -
trunk/AWT/Makefile
r985 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 OBJECTS = \ … … 11 11 AWT_query_and_functions.o AWT_file_selection.o AWT_species_sel_box.o \ 12 12 AWT_imp_exp.o AWT_preset.o AWT_seq_dna.o AWT_seq_protein.o AWT_seq_simple_pro.o \ 13 AWT_codon_table.o AWT_iupac.o AWT_config_manager.o AWT_advice.o 13 AWT_codon_table.o AWT_iupac.o AWT_config_manager.o AWT_advice.o 14 14 15 15 $(MAIN): $(OBJECTS) … … 24 24 ../MAKEBIN/aisc_mkpt -C $? >$@ 25 25 26 depend: 27 $(MAKEDEPEND) $(MAKEDEPENDINC) -D_USE_AW_WINDOW $(OBJECTS:.o=.cxx) 26 DEPENDS = $(OBJECTS:.o=.depend) 27 depends: $(DEPENDS) 28 @cat $(DEPENDS) | grep -v '^#' >>Makefile 29 @rm $(DEPENDS) 30 $(DEPENDS): depend.init 31 depend.init: 32 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 33 .cxx.depend: 34 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 28 35 29 36 # DO NOT DELETE THIS LINE -- make depend depends on it. … … 31 38 AWT_input_mask.o: $(ARBHOME)/INCLUDE/arbdb.h 32 39 AWT_input_mask.o: $(ARBHOME)/INCLUDE/arb_assert.h 33 AWT_input_mask.o: $(ARBHOME)/INCLUDE/ad_prot.h ./awt.hxx40 AWT_input_mask.o: $(ARBHOME)/INCLUDE/ad_prot.h awt.hxx 34 41 AWT_input_mask.o: $(ARBHOME)/INCLUDE/aw_window.hxx 35 42 AWT_input_mask.o: $(ARBHOME)/INCLUDE/aw_root.hxx 36 AWT_input_mask.o: $(ARBHOME)/INCLUDE/aw_device.hxx 37 AWT_input_mask.o: ./awt_www.hxx38 AWT_input_mask.o: awt_input_mask.hxx39 AWT_input_mask.o: $(ARBHOME)/INCLUDE/smartptr.h 40 AWT_ input_mask.o: ./awt_hotkeys.hxx41 AWT_hotkeys.o: ./awt_hotkeys.hxx 43 AWT_input_mask.o: $(ARBHOME)/INCLUDE/aw_device.hxx awt_www.hxx 44 AWT_input_mask.o: awt_input_mask.hxx $(ARBHOME)/INCLUDE/smartptr.h 45 AWT_input_mask.o: awt_hotkeys.hxx 46 47 AWT_hotkeys.o: awt_hotkeys.hxx 48 42 49 AWT_www.o: $(ARBHOME)/INCLUDE/aw_root.hxx 50 AWT_www.o: $(ARBHOME)/INCLUDE/arb_assert.h 51 AWT_www.o: $(ARBHOME)/INCLUDE/aw_global_awars.hxx 43 52 AWT_www.o: $(ARBHOME)/INCLUDE/aw_device.hxx 44 53 AWT_www.o: $(ARBHOME)/INCLUDE/aw_window.hxx 45 54 AWT_www.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 46 55 AWT_www.o: $(ARBHOME)/INCLUDE/arbdb.h 47 AWT_www.o: $(ARBHOME)/INCLUDE/arb_assert.h48 56 AWT_www.o: $(ARBHOME)/INCLUDE/ad_prot.h 49 57 AWT_www.o: $(ARBHOME)/INCLUDE/arbdbt.h 50 AWT_www.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ./awt.hxx58 AWT_www.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt.hxx 51 59 AWT_www.o: awt_config_manager.hxx 60 52 61 AWT_tables.o: $(ARBHOME)/INCLUDE/arbdb.h 53 62 AWT_tables.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 58 67 AWT_tables.o: $(ARBHOME)/INCLUDE/aw_device.hxx 59 68 AWT_tables.o: $(ARBHOME)/INCLUDE/aw_window.hxx 60 AWT_tables.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ./awt.hxx61 AWT_tables.o: awtlocal.hxx 69 AWT_tables.o: $(ARBHOME)/INCLUDE/aw_awars.hxx awt.hxx awtlocal.hxx 70 62 71 AWT_irstree.o: $(ARBHOME)/INCLUDE/arbdb.h 63 72 AWT_irstree.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 67 76 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_root.hxx 68 77 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_device.hxx 69 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_window.hxx 70 AWT_irstree.o: ./awt_canvas.hxx ./awt_nds.hxx awt_tree.hxx 71 AWT_irstree.o: ./awt_pro_a_nucs.hxx 72 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 73 AWT_irstree.o: awt_dtree.hxx awt_irstree.hxx 74 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 78 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt_canvas.hxx 79 AWT_irstree.o: awt_nds.hxx awt_tree.hxx awt_pro_a_nucs.hxx 80 AWT_irstree.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx awt_dtree.hxx 81 AWT_irstree.o: awt_irstree.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 82 75 83 AWT_asciiprint.o: $(ARBHOME)/INCLUDE/arbdb.h 76 84 AWT_asciiprint.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 80 88 AWT_asciiprint.o: $(ARBHOME)/INCLUDE/aw_root.hxx 81 89 AWT_asciiprint.o: $(ARBHOME)/INCLUDE/aw_device.hxx 82 AWT_asciiprint.o: $(ARBHOME)/INCLUDE/aw_window.hxx 83 AWT_asciiprint.o: ./awt.hxx awt_asciiprint.hxx 90 AWT_asciiprint.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt.hxx 91 AWT_asciiprint.o: awt_asciiprint.hxx 92 84 93 AWT_map_key.o: $(ARBHOME)/INCLUDE/aw_root.hxx 94 AWT_map_key.o: $(ARBHOME)/INCLUDE/arb_assert.h 85 95 AWT_map_key.o: $(ARBHOME)/INCLUDE/aw_device.hxx 86 AWT_map_key.o: $(ARBHOME)/INCLUDE/aw_window.hxx 87 AWT_map_key.o: awt_map_key.hxx 96 AWT_map_key.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt_map_key.hxx 97 88 98 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/arbdb.h 89 99 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 93 103 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/aw_root.hxx 94 104 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/aw_window.hxx 95 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/aw_device.hxx 96 AWT_tree_cmp.o: awt_tree.hxx ./awt_pro_a_nucs.hxx 97 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 98 AWT_tree_cmp.o: ./awt.hxx ./awt_tree_cmp.hxx 105 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/aw_device.hxx awt_tree.hxx 106 AWT_tree_cmp.o: awt_pro_a_nucs.hxx 107 AWT_tree_cmp.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx awt.hxx 108 AWT_tree_cmp.o: awt_tree_cmp.hxx 109 99 110 AWT_seq_colors.o: $(ARBHOME)/INCLUDE/arbdb.h 100 111 AWT_seq_colors.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 104 115 AWT_seq_colors.o: $(ARBHOME)/INCLUDE/aw_root.hxx 105 116 AWT_seq_colors.o: $(ARBHOME)/INCLUDE/aw_device.hxx 106 AWT_seq_colors.o: $(ARBHOME)/INCLUDE/aw_window.hxx 107 AWT_seq_colors.o: awt_seq_colors.hxx ./awt.hxx 117 AWT_seq_colors.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt_seq_colors.hxx 118 AWT_seq_colors.o: awt.hxx 119 108 120 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/arbdb.h 109 121 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/arb_assert.h 110 122 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/ad_prot.h 111 123 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/arbdbt.h 112 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 113 AWT_pro_a_nucs.o: ./awt_pro_a_nucs.hxx ./awt_codon_table.hxx ./awt.hxx124 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt_pro_a_nucs.hxx 125 AWT_pro_a_nucs.o: awt_codon_table.hxx awt.hxx 114 126 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/aw_window.hxx 115 127 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/aw_root.hxx 116 128 AWT_pro_a_nucs.o: $(ARBHOME)/INCLUDE/aw_device.hxx 129 117 130 AWT_csp.o: $(ARBHOME)/INCLUDE/arbdb.h 118 131 AWT_csp.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 122 135 AWT_csp.o: $(ARBHOME)/INCLUDE/aw_root.hxx 123 136 AWT_csp.o: $(ARBHOME)/INCLUDE/aw_device.hxx 124 AWT_csp.o: $(ARBHOME)/INCLUDE/aw_window.hxx ./awt.hxx 125 AWT_csp.o: awt_tree.hxx ./awt_pro_a_nucs.hxx 126 AWT_csp.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 137 AWT_csp.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt.hxx awt_tree.hxx 138 AWT_csp.o: awt_pro_a_nucs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 127 139 AWT_csp.o: BI_helix.hxx awt_csp.hxx 140 128 141 AWT_canvas.o: $(ARBHOME)/INCLUDE/arbdb.h 129 142 AWT_canvas.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 133 146 AWT_canvas.o: $(ARBHOME)/INCLUDE/aw_root.hxx 134 147 AWT_canvas.o: $(ARBHOME)/INCLUDE/aw_device.hxx 135 AWT_canvas.o: $(ARBHOME)/INCLUDE/aw_window.hxx 136 AWT_canvas.o: ./awt_canvas.hxx 148 AWT_canvas.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt_canvas.hxx 149 137 150 AWT_dtree.o: $(ARBHOME)/INCLUDE/arbdb.h 138 151 AWT_dtree.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 142 155 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_root.hxx 143 156 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_device.hxx 144 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_window.hxx ./awt.hxx 145 AWT_dtree.o: ./awt_canvas.hxx ./awt_nds.hxx awt_tree.hxx ./awt_pro_a_nucs.hxx 146 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 147 AWT_dtree.o: awt_dtree.hxx $(ARBHOME)/INCLUDE/aw_preset.hxx 157 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 158 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt.hxx 159 AWT_dtree.o: awt_canvas.hxx awt_nds.hxx awt_tree.hxx awt_pro_a_nucs.hxx 160 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx awt_dtree.hxx 161 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 148 162 AWT_dtree.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 163 149 164 AWT_tree.o: $(ARBHOME)/INCLUDE/arbdb.h 150 165 AWT_tree.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 154 169 AWT_tree.o: $(ARBHOME)/INCLUDE/aw_root.hxx 155 170 AWT_tree.o: $(ARBHOME)/INCLUDE/aw_device.hxx 156 AWT_tree.o: $(ARBHOME)/INCLUDE/aw_window.hxx 157 AWT_tree.o: ./awt_canvas.hxx ./awt.hxx awt_tree.hxx ./awt_pro_a_nucs.hxx171 AWT_tree.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt_canvas.hxx awt.hxx 172 AWT_tree.o: awt_tree.hxx awt_pro_a_nucs.hxx 158 173 AWT_tree.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 174 159 175 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/arbdb.h 160 176 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 165 181 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/aw_device.hxx 166 182 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/aw_window.hxx 167 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 168 AWT_tree_cb.o: ./awt_canvas.hxx awt_tree.hxx ./awt_pro_a_nucs.hxx 169 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 170 AWT_tree_cb.o: awt_dtree.hxx ./awt_tree_cb.hxx ./awt.hxx 183 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/aw_awars.hxx awt_canvas.hxx 184 AWT_tree_cb.o: awt_tree.hxx awt_pro_a_nucs.hxx 185 AWT_tree_cb.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx awt_dtree.hxx 186 AWT_tree_cb.o: awt_tree_cb.hxx awt.hxx 187 171 188 AWT_nei.o: $(ARBHOME)/INCLUDE/arbdb.h 172 189 AWT_nei.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 174 191 AWT_nei.o: $(ARBHOME)/INCLUDE/arbdbt.h 175 192 AWT_nei.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt_tree.hxx 176 AWT_nei.o: ./awt_pro_a_nucs.hxx177 AWT_nei.o: $(ARBHOME)/INCLUDE/aw_ color_groups.hxx178 AWT_nei.o: awt_nei.hxx 193 AWT_nei.o: awt_pro_a_nucs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 194 AWT_nei.o: $(ARBHOME)/INCLUDE/aw_root.hxx awt_nei.hxx 195 179 196 BI_helix.o: $(ARBHOME)/INCLUDE/arbdb.h 180 197 BI_helix.o: $(ARBHOME)/INCLUDE/arb_assert.h 181 198 BI_helix.o: $(ARBHOME)/INCLUDE/ad_prot.h 182 199 BI_helix.o: $(ARBHOME)/INCLUDE/arbdbt.h 183 BI_helix.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 184 BI_helix.o: $(ARBHOME)/INCLUDE/aw_root.hxx 185 BI_helix.o: $(ARBHOME)/INCLUDE/aw_device.hxx 186 BI_helix.o: $(ARBHOME)/INCLUDE/aw_window.hxx BI_helix.hxx 200 BI_helix.o: $(ARBHOME)/INCLUDE/ad_t_prot.h BI_helix.hxx 201 187 202 AWT_filter.o: $(ARBHOME)/INCLUDE/arbdb.h 188 203 AWT_filter.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 193 208 AWT_filter.o: $(ARBHOME)/INCLUDE/aw_device.hxx 194 209 AWT_filter.o: $(ARBHOME)/INCLUDE/aw_window.hxx 195 AWT_filter.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ./awt.hxx196 AWT_filter.o: awt filter.hxx awt_tree.hxx ./awt_pro_a_nucs.hxx210 AWT_filter.o: $(ARBHOME)/INCLUDE/aw_awars.hxx awt.hxx awtfilter.hxx 211 AWT_filter.o: awt_tree.hxx awt_pro_a_nucs.hxx 197 212 AWT_filter.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 213 198 214 AWT_sel_boxes.o: $(ARBHOME)/INCLUDE/arbdb.h 199 215 AWT_sel_boxes.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 204 220 AWT_sel_boxes.o: $(ARBHOME)/INCLUDE/aw_device.hxx 205 221 AWT_sel_boxes.o: $(ARBHOME)/INCLUDE/aw_window.hxx 206 AWT_sel_boxes.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ./awt.hxx207 AWT_sel_boxes.o: awtlocal.hxx 222 AWT_sel_boxes.o: $(ARBHOME)/INCLUDE/aw_awars.hxx awt.hxx awtlocal.hxx 223 208 224 AWT_canio.o: $(ARBHOME)/INCLUDE/arbdb.h 209 225 AWT_canio.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 213 229 AWT_canio.o: $(ARBHOME)/INCLUDE/aw_root.hxx 214 230 AWT_canio.o: $(ARBHOME)/INCLUDE/aw_device.hxx 215 AWT_canio.o: $(ARBHOME)/INCLUDE/aw_window.hxx 216 AWT_canio.o: ./awt_canvas.hxx ./awt.hxx 231 AWT_canio.o: $(ARBHOME)/INCLUDE/aw_window.hxx awt_canvas.hxx awt.hxx 232 217 233 AWT_nds.o: $(ARBHOME)/INCLUDE/aw_root.hxx 234 AWT_nds.o: $(ARBHOME)/INCLUDE/arb_assert.h 218 235 AWT_nds.o: $(ARBHOME)/INCLUDE/aw_device.hxx 219 236 AWT_nds.o: $(ARBHOME)/INCLUDE/aw_window.hxx 220 237 AWT_nds.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 221 238 AWT_nds.o: $(ARBHOME)/INCLUDE/arbdb.h 222 AWT_nds.o: $(ARBHOME)/INCLUDE/arb_assert.h223 239 AWT_nds.o: $(ARBHOME)/INCLUDE/ad_prot.h 224 240 AWT_nds.o: $(ARBHOME)/INCLUDE/arbdbt.h 225 AWT_nds.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ./awt.hxx 226 AWT_nds.o: ./awt_nds.hxx awt_config_manager.hxx 241 AWT_nds.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt.hxx awt_nds.hxx 242 AWT_nds.o: awt_config_manager.hxx 243 227 244 AWT_query_and_functions.o: $(ARBHOME)/INCLUDE/arbdb.h 228 245 AWT_query_and_functions.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 236 253 AWT_query_and_functions.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 237 254 AWT_query_and_functions.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 238 AWT_query_and_functions.o: ./awt.hxx awtlocal.hxx awt_config_manager.hxx255 AWT_query_and_functions.o: awt.hxx awtlocal.hxx awt_config_manager.hxx 239 256 AWT_query_and_functions.o: $(ARBHOME)/INCLUDE/GEN.hxx 240 257 AWT_query_and_functions.o: $(ARBHOME)/INCLUDE/adGene.h 258 241 259 AWT_file_selection.o: $(ARBHOME)/INCLUDE/arbdb.h 242 260 AWT_file_selection.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 247 265 AWT_file_selection.o: $(ARBHOME)/INCLUDE/aw_device.hxx 248 266 AWT_file_selection.o: $(ARBHOME)/INCLUDE/aw_window.hxx 249 AWT_file_selection.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 250 AWT_file_selection.o: ./awt.hxx awtlocal.hxx 267 AWT_file_selection.o: $(ARBHOME)/INCLUDE/aw_awars.hxx awt.hxx 268 AWT_file_selection.o: awtlocal.hxx 269 251 270 AWT_species_sel_box.o: $(ARBHOME)/INCLUDE/arbdb.h 252 271 AWT_species_sel_box.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 257 276 AWT_species_sel_box.o: $(ARBHOME)/INCLUDE/aw_device.hxx 258 277 AWT_species_sel_box.o: $(ARBHOME)/INCLUDE/aw_window.hxx 259 AWT_species_sel_box.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 260 AWT_species_sel_box.o: ./awt.hxx awtlocal.hxx 278 AWT_species_sel_box.o: $(ARBHOME)/INCLUDE/aw_awars.hxx awt.hxx 279 AWT_species_sel_box.o: awtlocal.hxx 280 261 281 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/arbdb.h 262 282 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 264 284 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/arbdbt.h 265 285 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 266 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/aw_root.hxx ./awt.hxx286 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/aw_root.hxx awt.hxx 267 287 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/aw_window.hxx 268 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/aw_device.hxx 269 AWT_imp_exp.o: ./awt_nds.hxx $(ARBHOME)/INCLUDE/xml.hxx 288 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/aw_device.hxx awt_nds.hxx 289 AWT_imp_exp.o: $(ARBHOME)/INCLUDE/xml.hxx 290 270 291 AWT_preset.o: $(ARBHOME)/INCLUDE/arbdb.h 271 292 AWT_preset.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 274 295 AWT_preset.o: $(ARBHOME)/INCLUDE/aw_device.hxx 275 296 AWT_preset.o: $(ARBHOME)/INCLUDE/aw_window.hxx 276 AWT_preset.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 277 AWT_preset.o: ./awt.hxx awt_advice.hxx297 AWT_preset.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx awt.hxx 298 AWT_preset.o: awt_advice.hxx awt_canvas.hxx 278 299 AWT_preset.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 300 279 301 AWT_seq_dna.o: $(ARBHOME)/INCLUDE/arbdb.h 280 302 AWT_seq_dna.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 282 304 AWT_seq_dna.o: $(ARBHOME)/INCLUDE/arbdbt.h 283 305 AWT_seq_dna.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt_tree.hxx 284 AWT_seq_dna.o: ./awt_pro_a_nucs.hxx306 AWT_seq_dna.o: awt_pro_a_nucs.hxx 285 307 AWT_seq_dna.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 286 AWT_seq_dna.o: awt_seq_dna.hxx 308 AWT_seq_dna.o: $(ARBHOME)/INCLUDE/aw_root.hxx awt_seq_dna.hxx 309 AWT_seq_dna.o: awt_parsimony_defaults.hxx 310 287 311 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/arbdb.h 288 312 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/arb_assert.h 289 313 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/ad_prot.h 290 314 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/arbdbt.h 291 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 292 AWT_seq_protein.o: awt_ tree.hxx ./awt_pro_a_nucs.hxx315 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt_tree.hxx 316 AWT_seq_protein.o: awt_pro_a_nucs.hxx 293 317 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 294 AWT_seq_protein.o: awt_seq_protein.hxx 318 AWT_seq_protein.o: $(ARBHOME)/INCLUDE/aw_root.hxx awt_seq_protein.hxx 319 AWT_seq_protein.o: awt_parsimony_defaults.hxx 320 295 321 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/arbdb.h 296 322 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/arb_assert.h 297 323 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/ad_prot.h 298 324 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/arbdbt.h 299 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 300 AWT_seq_simple_pro.o: awt_ tree.hxx ./awt_pro_a_nucs.hxx325 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/ad_t_prot.h awt_tree.hxx 326 AWT_seq_simple_pro.o: awt_pro_a_nucs.hxx 301 327 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 328 AWT_seq_simple_pro.o: $(ARBHOME)/INCLUDE/aw_root.hxx 302 329 AWT_seq_simple_pro.o: awt_seq_simple_pro.hxx 303 AWT_codon_table.o: awt_iupac.hxx 304 AWT_codon_table.o: $(ARBHOME)/INCLUDE/arbdb.h330 331 AWT_codon_table.o: awt_iupac.hxx $(ARBHOME)/INCLUDE/arbdb.h 305 332 AWT_codon_table.o: $(ARBHOME)/INCLUDE/arb_assert.h 306 AWT_codon_table.o: $(ARBHOME)/INCLUDE/ad_prot.h 307 AWT_codon_table.o: ./awt_codon_table.hxx ./awt.hxx 308 AWT_codon_table.o: $(ARBHOME)/INCLUDE/aw_window.hxx 333 AWT_codon_table.o: $(ARBHOME)/INCLUDE/ad_prot.h awt_codon_table.hxx 334 AWT_codon_table.o: awt.hxx $(ARBHOME)/INCLUDE/aw_window.hxx 309 335 AWT_codon_table.o: $(ARBHOME)/INCLUDE/aw_root.hxx 310 336 AWT_codon_table.o: $(ARBHOME)/INCLUDE/aw_device.hxx 337 311 338 AWT_iupac.o: $(ARBHOME)/INCLUDE/arb_assert.h awt_iupac.hxx 312 339 AWT_iupac.o: $(ARBHOME)/INCLUDE/arbdb.h 313 340 AWT_iupac.o: $(ARBHOME)/INCLUDE/ad_prot.h 314 AWT_config_manager.o: ./awt.hxx 341 342 AWT_config_manager.o: awt.hxx $(ARBHOME)/INCLUDE/arb_assert.h 315 343 AWT_config_manager.o: $(ARBHOME)/INCLUDE/aw_window.hxx 316 344 AWT_config_manager.o: $(ARBHOME)/INCLUDE/aw_root.hxx 317 345 AWT_config_manager.o: $(ARBHOME)/INCLUDE/aw_device.hxx 346 AWT_config_manager.o: $(ARBHOME)/INCLUDE/arbdb.h 347 AWT_config_manager.o: $(ARBHOME)/INCLUDE/ad_prot.h 318 348 AWT_config_manager.o: awt_config_manager.hxx 319 AWT_advice.o: awt_advice.hxx ./awt.hxx 349 350 AWT_advice.o: awt_advice.hxx $(ARBHOME)/INCLUDE/aw_root.hxx 351 AWT_advice.o: $(ARBHOME)/INCLUDE/arb_assert.h awt.hxx 320 352 AWT_advice.o: $(ARBHOME)/INCLUDE/aw_window.hxx 321 AWT_advice.o: $(ARBHOME)/INCLUDE/aw_root.hxx322 353 AWT_advice.o: $(ARBHOME)/INCLUDE/aw_device.hxx 323 354 AWT_advice.o: $(ARBHOME)/INCLUDE/arbdb.h 324 AWT_advice.o: $(ARBHOME)/INCLUDE/arb_assert.h325 355 AWT_advice.o: $(ARBHOME)/INCLUDE/ad_prot.h -
trunk/AWTC/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 4 4 CPP_OBJECTS = AWTC_next_neighbours.o AWTC_rename.o AWTC_names_admin.o \ 5 5 AWTC_seq_search.o AWTC_fast_aligner.o AWTC_ClustalV.o AWTC_constructSequence.o \ 6 AWTC_submission.o 6 AWTC_submission.o 7 7 # AWTC_names_client.o 8 8 $(MAIN): $(CPP_OBJECTS) … … 10 10 .cxx.o: 11 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 depend: 13 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 12 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 14 25 # DO NOT DELETE THIS LINE -- make depend depends on it. 15 26 … … 22 33 AWTC_next_neighbours.o: $(ARBHOME)/INCLUDE/PT_com.h 23 34 AWTC_next_neighbours.o: $(ARBHOME)/INCLUDE/client.h 24 AWTC_next_neighbours.o: ./awtc_next_neighbours.hxx 35 AWTC_next_neighbours.o: awtc_next_neighbours.hxx 36 25 37 AWTC_rename.o: $(ARBHOME)/INCLUDE/arbdb.h 26 38 AWTC_rename.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 30 42 AWTC_rename.o: $(ARBHOME)/INCLUDE/aw_root.hxx 31 43 AWTC_rename.o: $(ARBHOME)/INCLUDE/aw_device.hxx 32 AWTC_rename.o: $(ARBHOME)/INCLUDE/aw_window.hxx 33 AWTC_rename.o: awtc_rename.hxx 44 AWTC_rename.o: $(ARBHOME)/INCLUDE/aw_window.hxx awtc_rename.hxx 34 45 AWTC_rename.o: $(ARBHOME)/INCLUDE/names_client.h 35 46 AWTC_rename.o: $(ARBHOME)/INCLUDE/servercntrl.h 36 47 AWTC_rename.o: $(ARBHOME)/INCLUDE/client.h 48 37 49 AWTC_names_admin.o: $(ARBHOME)/INCLUDE/arbdb.h 38 50 AWTC_names_admin.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 41 53 AWTC_names_admin.o: $(ARBHOME)/INCLUDE/aw_device.hxx 42 54 AWTC_names_admin.o: $(ARBHOME)/INCLUDE/aw_window.hxx 43 AWTC_names_admin.o: $(ARBHOME)/INCLUDE/awt.hxx 44 AWTC_names_admin.o: awtc_rename.hxx 55 AWTC_names_admin.o: $(ARBHOME)/INCLUDE/awt.hxx awtc_rename.hxx 56 45 57 AWTC_seq_search.o: $(ARBHOME)/INCLUDE/aw_root.hxx 58 AWTC_seq_search.o: $(ARBHOME)/INCLUDE/arb_assert.h 46 59 AWTC_seq_search.o: $(ARBHOME)/INCLUDE/arbdb.h 47 AWTC_seq_search.o: $(ARBHOME)/INCLUDE/arb_assert.h 48 AWTC_seq_search.o: $(ARBHOME)/INCLUDE/ad_prot.h 49 AWTC_seq_search.o: ./awtc_seq_search.hxx 60 AWTC_seq_search.o: $(ARBHOME)/INCLUDE/ad_prot.h awtc_seq_search.hxx 61 50 62 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/arbdb.h 51 63 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 55 67 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/aw_root.hxx 56 68 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/aw_window.hxx 69 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/aw_device.hxx 57 70 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 58 71 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/island_hopping.h 59 AWTC_fast_aligner.o: ./awtc_next_neighbours.hxx ./awtc_seq_search.hxx72 AWTC_fast_aligner.o: awtc_next_neighbours.hxx awtc_seq_search.hxx 60 73 AWTC_fast_aligner.o: awtc_ClustalV.hxx awtc_fast_aligner.hxx 61 74 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/BI_helix.hxx 75 AWTC_fast_aligner.o: $(ARBHOME)/INCLUDE/awt.hxx 76 62 77 AWTC_ClustalV.o: $(ARBHOME)/INCLUDE/arbdb.h 63 78 AWTC_ClustalV.o: $(ARBHOME)/INCLUDE/arb_assert.h 64 79 AWTC_ClustalV.o: $(ARBHOME)/INCLUDE/ad_prot.h 65 AWTC_ClustalV.o: $(ARBHOME)/INCLUDE/aw_root.hxx 66 AWTC_ClustalV.o: awtc_ClustalV.hxx ./awtc_seq_search.hxx 80 AWTC_ClustalV.o: $(ARBHOME)/INCLUDE/aw_root.hxx awtc_ClustalV.hxx 81 AWTC_ClustalV.o: awtc_seq_search.hxx 82 67 83 AWTC_constructSequence.o: $(ARBHOME)/INCLUDE/arbdb.h 68 84 AWTC_constructSequence.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 72 88 AWTC_constructSequence.o: $(ARBHOME)/INCLUDE/aw_root.hxx 73 89 AWTC_constructSequence.o: $(ARBHOME)/INCLUDE/aw_window.hxx 90 AWTC_constructSequence.o: $(ARBHOME)/INCLUDE/aw_device.hxx 74 91 AWTC_constructSequence.o: awtc_fast_aligner.hxx 75 92 AWTC_constructSequence.o: $(ARBHOME)/INCLUDE/BI_helix.hxx 76 AWTC_constructSequence.o: ./awtc_seq_search.hxx awtc_constructSequence.hxx 93 AWTC_constructSequence.o: awtc_seq_search.hxx awtc_constructSequence.hxx 94 77 95 AWTC_submission.o: $(ARBHOME)/INCLUDE/arbdb.h 78 96 AWTC_submission.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/AWTI/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 4 4 CPP_OBJECTS = AWTI_import.o \ … … 9 9 .cxx.o: 10 10 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 11 depend: 12 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 11 12 DEPENDS = $(CPP_OBJECTS:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 .cxx.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 13 24 # DO NOT DELETE THIS LINE -- make depend depends on it. 14 25 … … 25 36 AWTI_import.o: $(ARBHOME)/INCLUDE/GEN.hxx 26 37 AWTI_import.o: $(ARBHOME)/INCLUDE/adGene.h awti_import.hxx 27 AWTI_import.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx 28 AWTI_import.o: awti_imp_local.hxx 38 AWTI_import.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx awti_imp_local.hxx 39 29 40 AWTI_export.o: $(ARBHOME)/INCLUDE/arbdb.h 30 41 AWTI_export.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 37 48 AWTI_export.o: $(ARBHOME)/INCLUDE/awt.hxx 38 49 AWTI_export.o: $(ARBHOME)/INCLUDE/inline.h awti_export.hxx 39 AWTI_export.o: awti_exp_local.hxx 40 AWTI_export.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 50 AWTI_export.o: awti_exp_local.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 41 51 AWTI_export.o: $(ARBHOME)/INCLUDE/xml.hxx -
trunk/CAT/Makefile
r866 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 CPP_OBJECTS = CAT_tree.o 5 CPP_OBJECTS = CAT_tree.o 6 6 7 7 $(MAIN): $(CPP_OBJECTS) 8 8 $(AR) $(MAIN) $(CPP_OBJECTS) 9 9 10 .cxx.o: 10 .cxx.o: 11 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 12 13 depend: 14 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .cxx.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 15 23 # DO NOT DELETE THIS LINE -- make depend depends on it. 16 24 -
trunk/CONSENSUS_TREE/Makefile
r887 r1617 1 .SUFFIXES: .o .cxx 1 .SUFFIXES: .o .cxx .depend 2 2 3 3 OBJS = CT_part.o CT_hash.o CT_ntree.o CT_rbtree.o CT_dtree.o CT_ctree.o CT_mem.o … … 6 6 $(AR) $(MAIN) $(OBJS) 7 7 8 .cxx.o: 8 .cxx.o: 9 9 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 10 clean: 11 11 rm -f *.o tp a.out 12 depend: 13 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJS:.o=.cxx) 12 13 DEPENDS = $(OBJS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 14 25 # DO NOT DELETE THIS LINE -- make depend depends on it. 15 26 … … 18 29 CT_part.o: $(ARBHOME)/INCLUDE/ad_prot.h 19 30 CT_part.o: $(ARBHOME)/INCLUDE/arbdbt.h 20 CT_part.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx 21 CT_part.o: CT_part.hxx 31 CT_part.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx CT_part.hxx 32 22 33 CT_hash.o: $(ARBHOME)/INCLUDE/arbdb.h 23 34 CT_hash.o: $(ARBHOME)/INCLUDE/arb_assert.h 24 35 CT_hash.o: $(ARBHOME)/INCLUDE/ad_prot.h 25 36 CT_hash.o: $(ARBHOME)/INCLUDE/arbdbt.h 26 CT_hash.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx 27 CT_hash.o: CT_part.hxx CT_hash.hxx CT_ntree.hxx 37 CT_hash.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx CT_part.hxx 38 CT_hash.o: CT_hash.hxx CT_ntree.hxx 39 28 40 CT_ntree.o: $(ARBHOME)/INCLUDE/arbdb.h 29 41 CT_ntree.o: $(ARBHOME)/INCLUDE/arb_assert.h 30 42 CT_ntree.o: $(ARBHOME)/INCLUDE/ad_prot.h 31 43 CT_ntree.o: $(ARBHOME)/INCLUDE/arbdbt.h 32 CT_ntree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx 33 CT_ntree.o: CT_part.hxx CT_ntree.hxx 44 CT_ntree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx CT_part.hxx 45 CT_ntree.o: CT_ntree.hxx 46 34 47 CT_rbtree.o: $(ARBHOME)/INCLUDE/arbdb.h 35 48 CT_rbtree.o: $(ARBHOME)/INCLUDE/arb_assert.h 36 49 CT_rbtree.o: $(ARBHOME)/INCLUDE/ad_prot.h 37 50 CT_rbtree.o: $(ARBHOME)/INCLUDE/arbdbt.h 38 CT_rbtree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx 39 CT_rbtree.o: CT_part.hxx CT_ntree.hxx CT_rbtree.hxx 51 CT_rbtree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_mem.hxx CT_part.hxx 52 CT_rbtree.o: CT_ntree.hxx CT_rbtree.hxx 53 40 54 CT_dtree.o: $(ARBHOME)/INCLUDE/arbdb.h 41 55 CT_dtree.o: $(ARBHOME)/INCLUDE/arb_assert.h 42 56 CT_dtree.o: $(ARBHOME)/INCLUDE/ad_prot.h 43 57 CT_dtree.o: $(ARBHOME)/INCLUDE/arbdbt.h 44 CT_dtree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_part.hxx 45 CT_dtree.o: CT_hash.hxx 58 CT_dtree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_part.hxx CT_hash.hxx 59 46 60 CT_ctree.o: $(ARBHOME)/INCLUDE/arbdb.h 47 61 CT_ctree.o: $(ARBHOME)/INCLUDE/arb_assert.h 48 62 CT_ctree.o: $(ARBHOME)/INCLUDE/ad_prot.h 49 63 CT_ctree.o: $(ARBHOME)/INCLUDE/arbdbt.h 50 CT_ctree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_part.hxx 51 CT_ctree.o: CT_ hash.hxx CT_ntree.hxx CT_rbtree.hxx CT_dtree.hxx64 CT_ctree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h CT_part.hxx CT_hash.hxx 65 CT_ctree.o: CT_ntree.hxx CT_rbtree.hxx CT_dtree.hxx -
trunk/CONVERTALN/Makefile
r1002 r1617 3 3 routines.o 4 4 5 .SUFFIXES: .o .c .cxx 5 .SUFFIXES: .o .c .cxx .depend 6 6 7 7 $(ARBHOME)/bin/arb_convert_aln: $(OBJECT) … … 14 14 ../MAKEBIN/aisc_mkpt -C $(OBJECT:.o=.c) >prototypes.h 15 15 16 depend: 17 $(MAKEDEPEND) $(OBJECT:.o=.c*) 16 #depend: 17 # $(MAKEDEPEND) $(OBJECT:.o=.c*) 18 19 DEPENDS = $(OBJECT:.o=.depend) 20 depends: $(DEPENDS) 21 @cat $(DEPENDS) | grep -v '^#' >>Makefile 22 @rm $(DEPENDS) 23 $(DEPENDS): depend.init 24 depend.init: 25 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 26 .c.depend: 27 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 28 .cxx.depend: 29 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 18 30 19 31 # DO NOT DELETE THIS LINE -- make depend depends on it. 20 32 21 main.o: convert.h global.h 22 main.o: prototypes.h 23 fconv.o: convert.h global.h prototypes.h 24 mg.o: convert.h global.h prototypes.h 25 genbank.o: convert.h 26 genbank.o: global.h prototypes.h 27 macke.o: convert.h global.h prototypes.h 28 phylip.o: convert.h global.h prototypes.h 29 paup.o: convert.h global.h prototypes.h 30 util.o: convert.h global.h prototypes.h 31 date.o: convert.h global.h prototypes.h 32 embl.o: convert.h global.h prototypes.h 33 gcg.o: convert.h global.h prototypes.h 34 printable.o: convert.h global.h prototypes.h 35 alma.o: convert.h global.h 36 alma.o: prototypes.h 37 routines.o: convert.h global.h prototypes.h 33 main.o: convert.h global.h prototypes.h 34 35 fconv.o: convert.h global.h prototypes.h 36 37 mg.o: convert.h global.h prototypes.h 38 39 genbank.o: convert.h global.h prototypes.h 40 41 macke.o: convert.h global.h prototypes.h 42 43 phylip.o: convert.h global.h prototypes.h 44 45 paup.o: convert.h global.h prototypes.h 46 47 util.o: convert.h global.h prototypes.h 48 49 date.o: convert.h global.h prototypes.h 50 51 embl.o: convert.h global.h prototypes.h 52 53 gcg.o: convert.h global.h prototypes.h 54 55 printable.o: convert.h global.h prototypes.h 56 57 alma.o: convert.h global.h prototypes.h 58 59 routines.o: convert.h global.h prototypes.h -
trunk/DBSERVER/Makefile
r866 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cxx 2 .SUFFIXES: .o .c .cxx .depend 3 3 OBJECTS = db_server.o 4 4 … … 7 7 $(OBJECTS): $(LOCALS) $(ARBDBH) $(SERVERCNTRLH) 8 8 9 depend:10 $( MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx)9 .cxx.o: 10 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 11 11 12 .cxx.o: 13 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 DEPENDS = $(OBJECTS:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 .cxx.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 14 23 15 24 # DO NOT DELETE THIS LINE -- make depend depends on it. -
trunk/DIST/Makefile
r1246 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 CPP_OBJECTS = DI_mldist.o DI_protdist.o DI_compress_matrix.o DI_view_matrix.o DI_save_matr.o DI_main.o DI_matr.o distanalyse.o … … 9 9 .cxx.o: 10 10 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 11 depend: 12 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 11 12 DEPENDS = $(CPP_OBJECTS:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 .cxx.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 13 24 # DO NOT DELETE THIS LINE -- make depend depends on it. 14 25 15 DI_mldist.o: 26 DI_mldist.o: $(ARBHOME)/INCLUDE/arbdb.h 16 27 DI_mldist.o: $(ARBHOME)/INCLUDE/arb_assert.h 17 28 DI_mldist.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 30 41 DI_mldist.o: $(ARBHOME)/INCLUDE/BI_helix.hxx 31 42 DI_mldist.o: $(ARBHOME)/INCLUDE/awt_csp.hxx di_matr.hxx di_mldist.hxx 43 32 44 DI_protdist.o: $(ARBHOME)/INCLUDE/arbdb.h 33 45 DI_protdist.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 48 60 DI_protdist.o: $(ARBHOME)/INCLUDE/awt_csp.hxx di_matr.hxx 49 61 DI_protdist.o: di_protdist.hxx 62 50 63 DI_compress_matrix.o: $(ARBHOME)/INCLUDE/arbdb.h 51 64 DI_compress_matrix.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 63 76 DI_compress_matrix.o: $(ARBHOME)/INCLUDE/awt_seq_simple_pro.hxx 64 77 DI_compress_matrix.o: $(ARBHOME)/INCLUDE/BI_helix.hxx di_matr.hxx 65 DI_compress_matrix.o: ./di_view_matrix.hxx 78 DI_compress_matrix.o: di_view_matrix.hxx 79 66 80 DI_view_matrix.o: $(ARBHOME)/INCLUDE/arbdb.h 67 81 DI_view_matrix.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 79 93 DI_view_matrix.o: $(ARBHOME)/INCLUDE/awt_seq_simple_pro.hxx 80 94 DI_view_matrix.o: $(ARBHOME)/INCLUDE/BI_helix.hxx di_matr.hxx 81 DI_view_matrix.o: ./di_view_matrix.hxx 82 DI_save_matr.o: $(ARBHOME)/INCLUDE/arbdb.h 95 DI_view_matrix.o: di_view_matrix.hxx 96 97 DI_save_matr.o: $(ARBHOME)/INCLUDE/arbdb.h 83 98 DI_save_matr.o: $(ARBHOME)/INCLUDE/arb_assert.h 84 99 DI_save_matr.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 96 111 DI_save_matr.o: $(ARBHOME)/INCLUDE/awt_nds.hxx 97 112 DI_save_matr.o: $(ARBHOME)/INCLUDE/awt_csp.hxx di_matr.hxx 98 DI_main.o: $(ARBHOME)/INCLUDE/arbdb.h 113 114 DI_main.o: $(ARBHOME)/INCLUDE/arbdb.h 99 115 DI_main.o: $(ARBHOME)/INCLUDE/arb_assert.h 100 116 DI_main.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 106 122 DI_main.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 107 123 DI_main.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 124 108 125 DI_matr.o: $(ARBHOME)/INCLUDE/arbdb.h 109 126 DI_matr.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 124 141 DI_matr.o: $(ARBHOME)/INCLUDE/awt_csp.hxx 125 142 DI_matr.o: $(ARBHOME)/INCLUDE/CT_ctree.hxx di_matr.hxx di_protdist.hxx 126 DI_matr.o: ./di_view_matrix.hxx 143 DI_matr.o: di_view_matrix.hxx 144 127 145 distanalyse.o: $(ARBHOME)/INCLUDE/arbdb.h 128 146 distanalyse.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/EDIT/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 4 CPP_OBJECTS = edit.o edit_naligner.o edit_tools.o ed_conf.o 4 # edit_mgr_client.o 5 # edit_mgr_client.o 6 5 7 $(MAIN): $(CPP_OBJECTS) 6 8 $(AR) $(MAIN) $(CPP_OBJECTS) 7 .cxx.o: 9 .cxx.o: 8 10 $(CPP) $(cflags) -c -D_USE_AW_WINDOW $(@:.o=.cxx) $(CPPINCLUDES) 9 depend: 10 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 11 12 DEPENDS = $(CPP_OBJECTS:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 .cxx.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 11 24 # DO NOT DELETE THIS LINE -- make depend depends on it. 12 25 26 edit.o: $(ARBHOME)/INCLUDE/arbdb.h 27 edit.o: $(ARBHOME)/INCLUDE/arb_assert.h 28 edit.o: $(ARBHOME)/INCLUDE/ad_prot.h 29 edit.o: $(ARBHOME)/INCLUDE/arbdbt.h 30 edit.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 31 edit.o: $(ARBHOME)/INCLUDE/arbdb++.hxx 32 edit.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 13 33 edit.o: $(ARBHOME)/INCLUDE/aw_root.hxx 14 edit.o: $(ARBHOME)/INCLUDE/arb_assert.h15 edit.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx16 34 edit.o: $(ARBHOME)/INCLUDE/aw_window.hxx 17 35 edit.o: $(ARBHOME)/INCLUDE/aw_device.hxx 18 36 edit.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 19 37 edit.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 20 edit.o: $(ARBHOME)/INCLUDE/arbdb.h21 edit.o: $(ARBHOME)/INCLUDE/ad_prot.h22 edit.o: $(ARBHOME)/INCLUDE/arbdbt.h23 edit.o: $(ARBHOME)/INCLUDE/ad_t_prot.h24 edit.o: $(ARBHOME)/INCLUDE/arbdb++.hxx25 38 edit.o: $(ARBHOME)/INCLUDE/adtools.hxx 26 39 edit.o: $(ARBHOME)/INCLUDE/BI_helix.hxx 27 edit.o: $(ARBHOME)/INCLUDE/st_window.hxx ./edit.hxx 28 edit.o: ed_conf.hxx $(ARBHOME)/INCLUDE/awt_map_key.hxx 29 edit.o: $(ARBHOME)/INCLUDE/gde.hxx 30 edit.o: $(ARBHOME)/INCLUDE/awt.hxx 40 edit.o: $(ARBHOME)/INCLUDE/st_window.hxx edit.hxx ed_conf.hxx 41 edit.o: $(ARBHOME)/INCLUDE/awt_map_key.hxx 42 edit.o: $(ARBHOME)/INCLUDE/gde.hxx $(ARBHOME)/INCLUDE/awt.hxx 31 43 edit.o: $(ARBHOME)/INCLUDE/awtc_fast_aligner.hxx 44 32 45 edit_naligner.o: $(ARBHOME)/INCLUDE/arbdb.h 46 edit_naligner.o: $(ARBHOME)/INCLUDE/arb_assert.h 33 47 edit_naligner.o: $(ARBHOME)/INCLUDE/ad_prot.h 34 48 edit_naligner.o: $(ARBHOME)/INCLUDE/arbdbt.h 35 49 edit_naligner.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 36 50 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_root.hxx 37 edit_naligner.o: $(ARBHOME)/INCLUDE/arb_assert.h38 51 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_device.hxx 39 52 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_window.hxx 40 53 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 54 edit_naligner.o: $(ARBHOME)/INCLUDE/awt.hxx 55 41 56 edit_tools.o: $(ARBHOME)/INCLUDE/arbdb.h 57 edit_tools.o: $(ARBHOME)/INCLUDE/arb_assert.h 42 58 edit_tools.o: $(ARBHOME)/INCLUDE/ad_prot.h 43 59 edit_tools.o: $(ARBHOME)/INCLUDE/arbdb++.hxx 60 edit_tools.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 44 61 edit_tools.o: $(ARBHOME)/INCLUDE/adtools.hxx 45 62 edit_tools.o: $(ARBHOME)/INCLUDE/aw_root.hxx 46 edit_tools.o: $(ARBHOME)/INCLUDE/arb_assert.h47 63 edit_tools.o: $(ARBHOME)/INCLUDE/aw_device.hxx 48 64 edit_tools.o: $(ARBHOME)/INCLUDE/aw_window.hxx 49 edit_tools.o: $(ARBHOME)/INCLUDE/BI_helix.hxx ./edit.hxx 65 edit_tools.o: $(ARBHOME)/INCLUDE/BI_helix.hxx edit.hxx 66 50 67 ed_conf.o: $(ARBHOME)/INCLUDE/arbdb.h 68 ed_conf.o: $(ARBHOME)/INCLUDE/arb_assert.h 51 69 ed_conf.o: $(ARBHOME)/INCLUDE/ad_prot.h 52 70 ed_conf.o: $(ARBHOME)/INCLUDE/arbdb++.hxx 71 ed_conf.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 53 72 ed_conf.o: $(ARBHOME)/INCLUDE/adtools.hxx 54 73 ed_conf.o: $(ARBHOME)/INCLUDE/aw_root.hxx 55 ed_conf.o: $(ARBHOME)/INCLUDE/arb_assert.h56 74 ed_conf.o: $(ARBHOME)/INCLUDE/aw_device.hxx 57 ed_conf.o: $(ARBHOME)/INCLUDE/aw_window.hxx ./edit.hxx75 ed_conf.o: $(ARBHOME)/INCLUDE/aw_window.hxx edit.hxx -
trunk/EDIT4/Makefile
r1354 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 CPP_OBJECTS = ED4_dump.o ED4_nds.o ED4_secedit.o \ 6 6 ED4_main.o ED4_mini_classes.o ED4_edit_string.o ED4_base.o ED4_manager.o ED4_terminal.o \ 7 7 ED4_root.o EDB_root_bact.o ED4_window.o ED4_members.o ED4_no_class.o ED4_list.o ED4_text_terminals.o \ 8 ED4_cursor.o ED4_tools.o ED4_search.o ED4_block.o ED4_visualizeSAI.o edit_naligner.o 8 ED4_cursor.o ED4_tools.o ED4_search.o ED4_block.o ED4_visualizeSAI.o edit_naligner.o 9 9 10 10 $(MAIN): $(CPP_OBJECTS) … … 14 14 $(CPP) $(cflags) -c -o $@ $(@:.o=.cxx) $(CPPINCLUDES) 15 15 16 depend: 17 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 18 16 DEPENDS = $(CPP_OBJECTS:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 .cxx.depend: 26 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 19 27 20 28 # DO NOT DELETE THIS LINE -- make depend depends on it. 21 29 22 30 ED4_dump.o: $(ARBHOME)/INCLUDE/arbdb.h 23 ED4_dump.o: $(ARBHOME)/INCLUDE/arb_assert.h 31 ED4_dump.o: $(ARBHOME)/INCLUDE/arb_assert.h 24 32 ED4_dump.o: $(ARBHOME)/INCLUDE/ad_prot.h 25 33 ED4_dump.o: $(ARBHOME)/INCLUDE/aw_window.hxx … … 27 35 ED4_dump.o: $(ARBHOME)/INCLUDE/aw_device.hxx ed4_class.hxx 28 36 ED4_dump.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 29 ED4_dump.o: ed4_search.hxx 37 ED4_dump.o: ed4_search.hxx 38 30 39 ED4_nds.o: $(ARBHOME)/INCLUDE/arbdb.h 31 40 ED4_nds.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 39 48 ED4_nds.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx ed4_search.hxx 40 49 ED4_nds.o: ed4_awars.hxx 50 41 51 ED4_secedit.o: $(ARBHOME)/INCLUDE/aw_root.hxx 52 ED4_secedit.o: $(ARBHOME)/INCLUDE/arb_assert.h 42 53 ED4_secedit.o: $(ARBHOME)/INCLUDE/aw_device.hxx 43 54 ED4_secedit.o: $(ARBHOME)/INCLUDE/aw_window.hxx 44 55 ED4_secedit.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 45 ED4_secedit.o: $(ARBHOME)/INCLUDE/secedit.hxx 46 ED4_secedit.o: $(ARBHOME)/INCLUDE/sec_graphic.hxx 47 ED4_secedit.o: ed4_secedit.hxx 56 ED4_secedit.o: $(ARBHOME)/INCLUDE/secedit.hxx 57 ED4_secedit.o: $(ARBHOME)/INCLUDE/sec_graphic.hxx ed4_secedit.hxx 58 48 59 ED4_main.o: $(ARBHOME)/INCLUDE/arbdb.h 49 60 ED4_main.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 64 75 ED4_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx ed4_search.hxx 65 76 ED4_main.o: ed4_awars.hxx ed4_edit_string.hxx ed4_nds.hxx edit_naligner.hxx 77 66 78 ED4_mini_classes.o: $(ARBHOME)/INCLUDE/arbdb.h 67 79 ED4_mini_classes.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 75 87 ED4_mini_classes.o: ed4_search.hxx ed4_edit_string.hxx ed4_awars.hxx 76 88 ED4_mini_classes.o: ed4_tools.hxx 89 77 90 ED4_edit_string.o: $(ARBHOME)/INCLUDE/arbdb.h 78 91 ED4_edit_string.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 90 103 ED4_edit_string.o: ed4_edit_string.hxx ed4_class.hxx ed4_search.hxx 91 104 ED4_edit_string.o: ed4_awars.hxx 92 ED4_base.o: $(ARBHOME)/INCLUDE/arbdb.h 105 106 ED4_base.o: $(ARBHOME)/INCLUDE/arbdb.h 93 107 ED4_base.o: $(ARBHOME)/INCLUDE/arb_assert.h 94 108 ED4_base.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 102 116 ED4_base.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 103 117 ED4_base.o: ed4_search.hxx ed4_awars.hxx ed4_edit_string.hxx 118 104 119 ED4_manager.o: $(ARBHOME)/INCLUDE/arbdb.h 105 120 ED4_manager.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 114 129 ED4_manager.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 115 130 ED4_manager.o: ed4_search.hxx ed4_awars.hxx ed4_edit_string.hxx ed4_tools.hxx 131 116 132 ED4_terminal.o: $(ARBHOME)/INCLUDE/arbdb.h 117 133 ED4_terminal.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 129 145 ED4_terminal.o: ed4_search.hxx ed4_awars.hxx ed4_edit_string.hxx 130 146 ED4_terminal.o: ed4_block.hxx ed4_nds.hxx 131 ED4_root.o: $(ARBHOME)/INCLUDE/arbdb.h 147 148 ED4_root.o: $(ARBHOME)/INCLUDE/arbdb.h 132 149 ED4_root.o: $(ARBHOME)/INCLUDE/arb_assert.h 133 150 ED4_root.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 150 167 ED4_root.o: ed4_awars.hxx ed4_tools.hxx ed4_block.hxx ed4_nds.hxx 151 168 ED4_root.o: ed4_secedit.hxx ed4_visualizeSAI.hxx edit_naligner.hxx 152 EDB_root_bact.o: $(ARBHOME)/INCLUDE/arbdb.h 169 170 EDB_root_bact.o: $(ARBHOME)/INCLUDE/arbdb.h 153 171 EDB_root_bact.o: $(ARBHOME)/INCLUDE/arb_assert.h 154 172 EDB_root_bact.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 160 178 EDB_root_bact.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 161 179 EDB_root_bact.o: ed4_search.hxx 162 ED4_window.o: $(ARBHOME)/INCLUDE/arbdb.h 180 181 ED4_window.o: $(ARBHOME)/INCLUDE/arbdb.h 163 182 ED4_window.o: $(ARBHOME)/INCLUDE/arb_assert.h 164 183 ED4_window.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 168 187 ED4_window.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 169 188 ED4_window.o: ed4_search.hxx ed4_tools.hxx 189 170 190 ED4_members.o: $(ARBHOME)/INCLUDE/arbdb.h 171 191 ED4_members.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 176 196 ED4_members.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 177 197 ED4_members.o: ed4_search.hxx 198 178 199 ED4_no_class.o: $(ARBHOME)/INCLUDE/arbdb.h 179 200 ED4_no_class.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 194 215 ED4_no_class.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx ed4_search.hxx 195 216 ED4_no_class.o: ed4_edit_string.hxx ed4_tools.hxx ed4_nds.hxx 196 ED4_list.o: $(ARBHOME)/INCLUDE/arbdb.h 217 218 ED4_list.o: $(ARBHOME)/INCLUDE/arbdb.h 197 219 ED4_list.o: $(ARBHOME)/INCLUDE/arb_assert.h 198 220 ED4_list.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 201 223 ED4_list.o: $(ARBHOME)/INCLUDE/aw_device.hxx ed4_class.hxx 202 224 ED4_list.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 203 ED4_list.o: ed4_search.hxx 225 ED4_list.o: ed4_search.hxx 226 204 227 ED4_text_terminals.o: $(ARBHOME)/INCLUDE/arbdb.h 205 228 ED4_text_terminals.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 219 242 ED4_text_terminals.o: ed4_search.hxx ed4_awars.hxx ed4_edit_string.hxx 220 243 ED4_text_terminals.o: ed4_block.hxx ed4_nds.hxx ed4_visualizeSAI.hxx 244 221 245 ED4_cursor.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx 222 246 ED4_cursor.o: $(ARBHOME)/INCLUDE/arbdb.h … … 233 257 ED4_cursor.o: ed4_search.hxx ed4_edit_string.hxx ed4_tools.hxx ed4_awars.hxx 234 258 ED4_cursor.o: ed4_secedit.hxx 259 235 260 ED4_tools.o: $(ARBHOME)/INCLUDE/arbdb.h 236 261 ED4_tools.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 247 272 ED4_tools.o: ed4_defs.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 248 273 ED4_tools.o: ed4_search.hxx ed4_edit_string.hxx ed4_tools.hxx ed4_awars.hxx 249 ED4_search.o: $(ARBHOME)/INCLUDE/arbdb.h 274 275 ED4_search.o: $(ARBHOME)/INCLUDE/arbdb.h 250 276 ED4_search.o: $(ARBHOME)/INCLUDE/arb_assert.h 251 277 ED4_search.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 264 290 ED4_search.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx ed4_search.hxx 265 291 ED4_search.o: ed4_tools.hxx 266 ED4_block.o: $(ARBHOME)/INCLUDE/arbdb.h 292 293 ED4_block.o: $(ARBHOME)/INCLUDE/arbdb.h 267 294 ED4_block.o: $(ARBHOME)/INCLUDE/arb_assert.h 268 295 ED4_block.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 279 306 ED4_block.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx ed4_search.hxx 280 307 ED4_block.o: ed4_tools.hxx ed4_block.hxx ed4_edit_string.hxx 308 281 309 ED4_visualizeSAI.o: $(ARBHOME)/INCLUDE/arbdb.h 282 310 ED4_visualizeSAI.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 292 320 ED4_visualizeSAI.o: ../NTREE/ad_ext.hxx ed4_class.hxx ed4_defs.hxx 293 321 ED4_visualizeSAI.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 294 ED4_visualizeSAI.o: ed4_search.hxx ed4_visualizeSAI.hxx 322 ED4_visualizeSAI.o: ed4_search.hxx ed4_visualizeSAI.hxx 323 295 324 edit_naligner.o: $(ARBHOME)/INCLUDE/arbdb.h 296 325 edit_naligner.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 301 330 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_device.hxx 302 331 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_window.hxx 303 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 332 edit_naligner.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 333 edit_naligner.o: $(ARBHOME)/INCLUDE/awt.hxx -
trunk/EISPACK/Makefile
r83 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 … … 11 11 12 12 13 .cxx.o: 13 .cxx.o: 14 14 $(CPP) -O -c $< $(CPPINCLUDES) 15 15 16 depend: 17 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 16 DEPENDS = $(CPP_OBJECTS:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 .cxx.depend: 26 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 27 18 28 # DO NOT DELETE THIS LINE -- make depend depends on it. 19 29 20 30 eispack.o: f2c.h 31 21 32 d_sign.o: f2c.h -
trunk/GDE/AxML/Makefile
r751 r1617 1 1 # Makefile February 2002 by Alexandros P. Stamatakis 2 2 3 .SUFFIXES: .o .c .h 3 .SUFFIXES: .o .c .h .depend 4 4 5 OBJECT = axml.o5 OBJECTS = axml.o 6 6 RM = rm -f 7 7 … … 33 33 all : $(TARGET) 34 34 35 $(TARGET) : $(OBJECT )35 $(TARGET) : $(OBJECTS) 36 36 $(CC) $(CFLAGS) -o $@ $< $(LDFLAGS) 37 37 … … 40 40 41 41 clean : 42 $(RM) $(OBJECT ) $(TARGET)42 $(RM) $(OBJECTS) $(TARGET) 43 43 44 depend: 45 makedepend $(MAKEDEPENDINC) $(OBJECT:.o=.c) 44 DEPENDS = $(OBJECTS:.o=.depend) 45 depends: $(DEPENDS) 46 @cat $(DEPENDS) | grep -v '^#' >>Makefile 47 @rm $(DEPENDS) 48 $(DEPENDS): depend.init 49 depend.init: 50 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 51 .c.depend: 52 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 46 53 47 54 # DO NOT DELETE 48 55 49 axml.o: 56 axml.o: axml.h -
trunk/GDE/CLUSTAL/Makefile
r597 r1617 1 .SUFFIXES: .o .c 1 .SUFFIXES: .o .c .depend 2 2 3 3 OBJECTS = clustalv.o amenu.o myers.o sequence.o showpair.o \ … … 11 11 $(ACC) $(cflags) -c -o $@ $< $(AINCLUDES) 12 12 13 depend: 14 makedepend $(MAKEDEPENDINC) $(OBJECTS:.o=.c) 13 DEPENDS = $(OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 15 22 16 23 # DO NOT DELETE THIS LINE -- make depend depends on it. 17 24 18 clustalv.o: clustalv.h general.h matrices.h 19 amenu.o: clustalv.h 20 amenu.o: general.h 21 myers.o: clustalv.h general.h 22 sequence.o: clustalv.h 23 sequence.o: general.h 24 showpair.o: clustalv.h general.h 25 upgma.o: clustalv.h general.h 25 clustalv.o: clustalv.h general.h matrices.h 26 27 amenu.o: clustalv.h general.h 28 29 myers.o: clustalv.h general.h 30 31 sequence.o: clustalv.h general.h 32 33 showpair.o: clustalv.h general.h 34 35 upgma.o: clustalv.h general.h 36 26 37 util.o: clustalv.h general.h 27 trees.o: clustalv.h general.h 38 39 trees.o: clustalv.h general.h -
trunk/GDE/CLUSTALW/Makefile
r597 r1617 1 .SUFFIXES: .o .c 2 1 .SUFFIXES: .o .c .depend 2 3 3 OBJECTS = interface.o sequence.o showpair.o malign.o \ 4 4 util.o trees.o gcgcheck.o prfalign.o pairalign.o \ 5 5 calcgapcoeff.o calcprf1.o calcprf2.o calctree.o \ 6 6 readmat.o alnscore.o random.o clustalw.o amenu.o 7 8 7 8 9 9 $(ARBHOME)/bin/clustalw : $(OBJECTS) 10 10 $(ACC) $(cflags) -o $@ $(OBJECTS) -lm 11 11 12 12 .c.o: 13 13 $(ACC) $(cflags) -c -o $@ $< $(AINCLUDES) 14 14 15 depend: 16 makedepend $(MAKEDEPENDINC) $(OBJECTS:.o=.c) 15 DEPENDS = $(OBJECTS:.o=.depend) 16 depends: $(DEPENDS) 17 @cat $(DEPENDS) | grep -v '^#' >>Makefile 18 @rm $(DEPENDS) 19 $(DEPENDS): depend.init 20 depend.init: 21 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 22 .c.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 17 24 18 25 # DO NOT DELETE THIS LINE -- make depend depends on it. 19 26 20 interface.o: clustalw.h general.h param.h 21 sequence.o: clustalw.h 22 sequence.o: general.h 23 showpair.o: clustalw.h general.h 24 malign.o: clustalw.h 25 malign.o: general.h 27 interface.o: clustalw.h general.h param.h 28 29 sequence.o: clustalw.h general.h 30 31 showpair.o: clustalw.h general.h 32 33 malign.o: clustalw.h general.h 34 26 35 util.o: clustalw.h general.h 27 trees.o: clustalw.h general.h dayhoff.h 28 prfalign.o: clustalw.h general.h 29 pairalign.o: clustalw.h general.h 30 calcgapcoeff.o: clustalw.h 31 calcgapcoeff.o: general.h 32 calcprf1.o: clustalw.h general.h 33 calcprf2.o: clustalw.h general.h 34 calctree.o: clustalw.h 35 calctree.o: general.h 36 readmat.o: clustalw.h general.h matrices.h 36 37 trees.o: clustalw.h general.h dayhoff.h 38 39 prfalign.o: clustalw.h general.h 40 41 pairalign.o: clustalw.h general.h 42 43 calcgapcoeff.o: clustalw.h general.h 44 45 calcprf1.o: clustalw.h general.h 46 47 calcprf2.o: clustalw.h general.h 48 49 calctree.o: clustalw.h general.h 50 51 readmat.o: clustalw.h general.h matrices.h 52 37 53 alnscore.o: clustalw.h general.h 38 clustalw.o: clustalw.h general.h 39 amenu.o: clustalw.h general.h 54 55 clustalw.o: clustalw.h general.h 56 57 amenu.o: clustalw.h general.h -
trunk/GDE/CORE/Makefile
r1003 r1617 1 1 2 .SUFFIXES: .o .c 2 .SUFFIXES: .o .c .depend 3 3 4 C COBJS= ParseMenu.o main.o BasicDisplay.o EventHandler.o FileIO.o \4 C_OBJECTS= ParseMenu.o main.o BasicDisplay.o EventHandler.o FileIO.o \ 5 5 DrawNA.o Free.o BuiltIn.o Edit.o Genbank.o Scroll.o ChooseFile.o \ 6 6 CutCopyPaste.o HGLfile.o arbdb_io.o … … 10 10 $(MAIN): $(ARBHOME)/bin/arb_gde 11 11 12 $(ARBHOME)/bin/arb_gde: $(C COBJS)13 $(ACC) $(cflags) -o $@ $(C COBJS) $(LIBS)12 $(ARBHOME)/bin/arb_gde: $(C_OBJECTS) 13 $(ACC) $(cflags) -o $@ $(C_OBJECTS) $(LIBS) 14 14 15 15 update: $(ARBHOME)/bin/arb_gde … … 17 17 proto: functions.h 18 18 19 $(C COBJS) : functions.h19 $(C_OBJECTS) : functions.h 20 20 21 functions.h: $(C COBJS:.o=.c)21 functions.h: $(C_OBJECTS:.o=.c) 22 22 rm -f functions.h 23 23 ../../MAKEBIN/aisc_mkpt -C *.c >functions.h … … 28 28 $(ACC) $(cflags) $(AINCLUDES) -c -o $@ $< 29 29 30 depend: 31 makedepend $(MAKEDEPENDINC) $(CCOBJS:.o=.c) 30 DEPENDS = $(C_OBJECTS:.o=.depend) 31 depends: $(DEPENDS) 32 @cat $(DEPENDS) | grep -v '^#' >>Makefile 33 @rm $(DEPENDS) 34 $(DEPENDS): depend.init 35 depend.init: 36 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 37 .c.depend: 38 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 32 39 33 40 # DO NOT DELETE THIS LINE -- make depend depends on it. 34 41 35 ParseMenu.o: menudefs.h defines.h functions.h 36 main.o: menudefs.h defines.h functions.h 37 main.o: globals.h icon_gde.bitmap 38 BasicDisplay.o: menudefs.h defines.h functions.h 42 ParseMenu.o: menudefs.h defines.h functions.h 43 44 main.o: menudefs.h defines.h functions.h globals.h icon_gde.bitmap 45 46 BasicDisplay.o: menudefs.h defines.h functions.h 47 39 48 EventHandler.o: menudefs.h defines.h functions.h 40 FileIO.o: menudefs.h defines.h functions.h 41 DrawNA.o: menudefs.h defines.h functions.h 42 Free.o: menudefs.h defines.h functions.h 43 BuiltIn.o: menudefs.h 44 BuiltIn.o: defines.h functions.h 45 Edit.o: menudefs.h 46 Edit.o: defines.h functions.h 47 Genbank.o: menudefs.h defines.h functions.h 48 Scroll.o: menudefs.h defines.h functions.h 49 50 FileIO.o: menudefs.h defines.h functions.h 51 52 DrawNA.o: menudefs.h defines.h functions.h 53 54 Free.o: menudefs.h defines.h functions.h 55 56 BuiltIn.o: menudefs.h defines.h functions.h 57 58 Edit.o: menudefs.h defines.h functions.h 59 60 Genbank.o: menudefs.h defines.h functions.h 61 62 Scroll.o: menudefs.h defines.h functions.h 63 49 64 CutCopyPaste.o: menudefs.h defines.h functions.h 50 HGLfile.o: menudefs.h defines.h functions.h 65 66 HGLfile.o: menudefs.h defines.h functions.h 67 51 68 arbdb_io.o: $(ARBHOME)/INCLUDE/arbdb.h 52 69 arbdb_io.o: $(ARBHOME)/INCLUDE/arb_assert.h 53 70 arbdb_io.o: $(ARBHOME)/INCLUDE/ad_prot.h 54 71 arbdb_io.o: $(ARBHOME)/INCLUDE/arbdbt.h 55 arbdb_io.o: $(ARBHOME)/INCLUDE/ad_t_prot.h menudefs.h 56 arbdb_io.o: defines.hfunctions.h72 arbdb_io.o: $(ARBHOME)/INCLUDE/ad_t_prot.h menudefs.h defines.h 73 arbdb_io.o: functions.h -
trunk/GDE/FASTDNAML/Makefile
r777 r1617 1 .SUFFIXES: .o .c 1 .SUFFIXES: .o .c .depend 2 2 3 3 OBJECT = fastDNAml.o … … 14 14 $(ACC) $(cflags) -c -o $@ $< $(AINCLUDES) 15 15 16 depend: 17 makedepend $(MAKEDEPENDINC) $(OBJECT:.o=.c) 16 DEPENDS = $(OBJECT:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 18 26 19 27 ARB_DOC=../../GDEHELP/fastdnaml.help … … 27 35 # DO NOT DELETE 28 36 29 fastDNAml.o: 37 fastDNAml.o: fastDNAml.h -
trunk/GDE/HGL_SRC/Makefile
r747 r1617 1 .SUFFIXES: .o .c 1 .SUFFIXES: .o .c .depend 2 2 3 3 CC = $(ACC) 4 4 cflags = -g 5 5 6 MFILE = 6 MFILE = 7 7 INCDIR = -I$(OPENWINHOME)/include -I$(XHOME)/include 8 8 LIBDIR = -L$(OPENWINHOME)/lib -L$(XHOME)/lib … … 11 11 libs.o = Alloc.o HGLfuncs.o 12 12 PROGS = mapview MakeCons Consto01mask PrintStrat Translate heapsortHGL DotPlotTool 13 OBJECTS = Alloc.o Consto01mask.o DotPlotTool.o HGLfuncs.o MAP_ChooseFile.o MakeCons.o \ 14 PrintStrat.o Translate.o heapsortHGL.o mapview.o 13 15 14 16 all: $(PROGS:%=$(ARBHOME)/bin/%) … … 16 18 .c.o : 17 19 $(CC) -c $(cflags) $< $(INCDIR) 18 depend: 19 makedepend $(MAKEDEPENDINC) *.c 20 $(ARBHOME)/bin/mapview: mapview.c MAP_ChooseFile.o $(libs.o) 20 21 DEPENDS = $(OBJECTS:.o=.depend) 22 depends: $(DEPENDS) 23 @cat $(DEPENDS) | grep -v '^#' >>Makefile 24 @rm $(DEPENDS) 25 $(DEPENDS): depend.init 26 depend.init: 27 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 28 .c.depend: 29 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 30 31 $(ARBHOME)/bin/mapview: mapview.c MAP_ChooseFile.o $(libs.o) 21 32 $(CC) $(cflags) -o $@ $(@F).c MAP_ChooseFile.o $(libs.o) $(INCDIR) $(LIBDIR) $(LIBS) 22 33 23 $(ARBHOME)/bin/DotPlotTool: DotPlotTool.c MAP_ChooseFile.o $(libs.o) 34 $(ARBHOME)/bin/DotPlotTool: DotPlotTool.c MAP_ChooseFile.o $(libs.o) 24 35 $(CC) $(cflags) -o $@ $(@F).c MAP_ChooseFile.o $(libs.o) \ 25 36 $(INCDIR) $(LIBDIR) $(LIBS) … … 41 52 # DO NOT DELETE THIS LINE -- make depend depends on it. 42 53 43 Alloc.o: global_defs.h 44 Consto01mask.o: global_defs.h 45 DotPlotTool.o: global_defs.h 46 DotPlotTool.o: plot.icon 47 HGLfuncs.o: global_defs.h 48 MakeCons.o: global_defs.h 49 PrintStrat.o: global_defs.h 50 Translate.o: global_defs.h 51 heapsortHGL.o: global_defs.h 52 mapview.o: global_defs.h 54 Alloc.o: global_defs.h 55 56 Consto01mask.o: global_defs.h 57 58 DotPlotTool.o: global_defs.h plot.icon 59 60 HGLfuncs.o: global_defs.h 61 62 MakeCons.o: global_defs.h 63 64 PrintStrat.o: global_defs.h 65 66 Translate.o: global_defs.h 67 68 heapsortHGL.o: global_defs.h 69 70 mapview.o: global_defs.h -
trunk/GDE/LOOPTOOL/Makefile
r747 r1617 1 .SUFFIXES: .o .c 1 .SUFFIXES: .o .c .depend 2 2 3 3 OBJECTS = main.o Window.o menu.o ReadData.o Draw.o WriteData.o … … 10 10 $(ACC) -c $(cflags) $(AINCLUDES) -I$(OPENWINHOME)/include $< 11 11 12 depend: 13 makedepend $(MAKEDEPENDINC) $(OBJECTS:.o=.c) 12 DEPENDS = $(OBJECTS:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 14 22 # DO NOT DELETE THIS LINE -- make depend depends on it. 15 23 16 main.o: loop.h globals.h 17 Window.o: loop.h globals.h 18 menu.o: loop.h globals.h 19 ReadData.o: loop.h 20 ReadData.o: globals.h 21 Draw.o: loop.h globals.h 22 WriteData.o: loop.h 23 WriteData.o: globals.h 24 main.o: loop.h globals.h 25 26 Window.o: loop.h globals.h 27 28 menu.o: loop.h globals.h 29 30 ReadData.o: loop.h globals.h 31 32 Draw.o: loop.h globals.h 33 34 WriteData.o: loop.h globals.h -
trunk/GDE/MOLPHY/Makefile
r597 r1617 1 .SUFFIXES: .o .c 1 .SUFFIXES: .o .c .depend 2 2 3 3 INSTALLDIR = ../../bin … … 40 40 OBJNDML = Nucdml.o Ndmlproc.o nucproc.o Ntranprb.o Ndistan.o Nmlklhd.o 41 41 42 # all objects: 43 OBJECTS = Dpstree.o Ndistan.o Njdist.o Nmlklhd.o Nseqstat.o Ntranprb.o Nucml.o Nucst.o Nuctpm.o \ 44 Prottpm.o abratio.o altree.o distan.o distproc.o dyhfjtt.o getseq.o matrixut.o mlklhd.o \ 45 mltree.o mtrev22.o mtrev24.o mygetopt.o njmtree.o njproc.o njtree.o nucproc.o optimtpm.o \ 46 protml.o protproc.o protst.o prtree.o pstree.o qltree.o seqproc.o seqstat.o sltree.o \ 47 totalml.o tranprb.o tridist.o triproc.o 48 42 49 SOURCES_TML = $(OBJML:.o=.c) $(OBJPML:.o=.c) 43 50 … … 87 94 $(CC) $(CFLAGS) $(NUCLE) $(DEFINE) -o $@ $(OBJML) $(OBJNDML) $(LIBS) 88 95 89 # default 96 # default 90 97 .c.o : 91 98 $(ACC) -c $(cflags) $< … … 171 178 rm -f core *.o $(PRGS) 172 179 173 depend: 174 makedepend $(MAKEDEPENDINC) -p ../../bin/ *.c 180 DEPENDS = $(OBJECTS:.o=.depend) 181 depends: $(DEPENDS) 182 @cat $(DEPENDS) | grep -v '^#' >>Makefile 183 @rm $(DEPENDS) 184 $(DEPENDS): depend.init 185 depend.init: 186 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 187 .c.depend: 188 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 175 189 176 190 # DO NOT DELETE THIS LINE -- make depend depends on it. 177 191 178 ../../bin/Dpstree.o: protml.h molphy.h 179 ../../bin/Dpstree.o: 180 ../../bin/Dpstree.o: 181 ../../bin/Dpstree.o: 182 ../../bin/Dpstree.o: 183 ../../bin/Dpstree.o: 184 ../../bin/Dpstree.o: 185 ../../bin/Dpstree.o: 186 ../../bin/Dpstree.o: 187 ../../bin/Dpstree.o: 188 ../../bin/Dpstree.o: 189 ../../bin/Dpstree.o: 190 ../../bin/Dpstree.o: 191 ../../bin/Dpstree.o: 192 ../../bin/Dpstree.o: 193 ../../bin/Dpstree.o: 194 ../../bin/Dpstree.o: matrixut.h 195 ../../bin/Ndistan.o: protml.h molphy.h 196 ../../bin/Ndistan.o: 197 ../../bin/Ndistan.o: 198 ../../bin/Ndistan.o: 199 ../../bin/Ndistan.o: 200 ../../bin/Ndistan.o: 201 ../../bin/Ndistan.o: 202 ../../bin/Ndistan.o: 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../../bin/Nmlklhd.o: 242 ../../bin/Nmlklhd.o: 243 ../../bin/Nmlklhd.o: 244 ../../bin/Nmlklhd.o: 245 ../../bin/Nmlklhd.o: matrixut.h 246 ../../bin/Nseqstat.o: protst.h molphy.h 247 ../../bin/Nseqstat.o: 248 ../../bin/Nseqstat.o: 249 ../../bin/Nseqstat.o: 250 ../../bin/Nseqstat.o: 251 ../../bin/Nseqstat.o: 252 ../../bin/Nseqstat.o: 253 ../../bin/Nseqstat.o: 254 ../../bin/Nseqstat.o: 255 ../../bin/Nseqstat.o: 256 ../../bin/Nseqstat.o: 257 ../../bin/Nseqstat.o: 258 ../../bin/Nseqstat.o: 259 ../../bin/Nseqstat.o: 260 ../../bin/Nseqstat.o: 261 ../../bin/Nseqstat.o: 262 ../../bin/Nseqstat.o: matrixut.h 263 ../../bin/Ntranprb.o: protml.h molphy.h 264 ../../bin/Ntranprb.o: 265 ../../bin/Ntranprb.o: 266 ../../bin/Ntranprb.o: 267 ../../bin/Ntranprb.o: 268 ../../bin/Ntranprb.o: 269 ../../bin/Ntranprb.o: 270 ../../bin/Ntranprb.o: 271 ../../bin/Ntranprb.o: 272 ../../bin/Ntranprb.o: 273 ../../bin/Ntranprb.o: 274 ../../bin/Ntranprb.o: 275 ../../bin/Ntranprb.o: 276 ../../bin/Ntranprb.o: 277 ../../bin/Ntranprb.o: 278 ../../bin/Ntranprb.o: 279 ../../bin/Ntranprb.o: matrixut.h 280 ../../bin/Nucml.o: protml.h molphy.h 281 ../../bin/Nucml.o: 282 ../../bin/Nucml.o: 283 ../../bin/Nucml.o: 284 ../../bin/Nucml.o: 285 ../../bin/Nucml.o: 286 ../../bin/Nucml.o: 287 ../../bin/Nucml.o: 288 ../../bin/Nucml.o: 289 ../../bin/Nucml.o: 290 ../../bin/Nucml.o: 291 ../../bin/Nucml.o: 292 ../../bin/Nucml.o: 293 ../../bin/Nucml.o: 294 ../../bin/Nucml.o: 295 ../../bin/Nucml.o: 296 ../../bin/Nucml.o: matrixut.h 297 ../../bin/Nucst.o: protst.h molphy.h 298 ../../bin/Nucst.o: 299 ../../bin/Nucst.o: 300 ../../bin/Nucst.o: 301 ../../bin/Nucst.o: 302 ../../bin/Nucst.o: 303 ../../bin/Nucst.o: 304 ../../bin/Nucst.o: 305 ../../bin/Nucst.o: 306 ../../bin/Nucst.o: 307 ../../bin/Nucst.o: 308 ../../bin/Nucst.o: 309 ../../bin/Nucst.o: 310 ../../bin/Nucst.o: 311 ../../bin/Nucst.o: 312 ../../bin/Nucst.o: 313 ../../bin/Nucst.o: matrixut.h 314 ../../bin/Nuctpm.o: protml.h molphy.h 315 ../../bin/Nuctpm.o: 316 ../../bin/Nuctpm.o: 317 ../../bin/Nuctpm.o: 318 ../../bin/Nuctpm.o: 319 ../../bin/Nuctpm.o: 320 ../../bin/Nuctpm.o: 321 ../../bin/Nuctpm.o: 322 ../../bin/Nuctpm.o: 323 ../../bin/Nuctpm.o: 324 ../../bin/Nuctpm.o: 325 ../../bin/Nuctpm.o: 326 ../../bin/Nuctpm.o: 327 ../../bin/Nuctpm.o: 328 ../../bin/Nuctpm.o: 329 ../../bin/Nuctpm.o: 330 ../../bin/Nuctpm.o: matrixut.h 331 ../../bin/Prottpm.o: protml.h molphy.h 332 ../../bin/Prottpm.o: 333 ../../bin/Prottpm.o: 334 ../../bin/Prottpm.o: 335 ../../bin/Prottpm.o: 336 ../../bin/Prottpm.o: 337 ../../bin/Prottpm.o: 338 ../../bin/Prottpm.o: 339 ../../bin/Prottpm.o: 340 ../../bin/Prottpm.o: 341 ../../bin/Prottpm.o: 342 ../../bin/Prottpm.o: 343 ../../bin/Prottpm.o: 344 ../../bin/Prottpm.o: 345 ../../bin/Prottpm.o: 346 ../../bin/Prottpm.o: 347 ../../bin/Prottpm.o: matrixut.h 348 ../../bin/altree.o: protml.h molphy.h 349 ../../bin/altree.o: 350 ../../bin/altree.o: 351 ../../bin/altree.o: 352 ../../bin/altree.o: 353 ../../bin/altree.o: 354 ../../bin/altree.o: 355 ../../bin/altree.o: 356 ../../bin/altree.o: 357 ../../bin/altree.o: 358 ../../bin/altree.o: 359 ../../bin/altree.o: 360 ../../bin/altree.o: 361 ../../bin/altree.o: 362 ../../bin/altree.o: 363 ../../bin/altree.o: 364 ../../bin/altree.o: matrixut.h 365 ../../bin/distan.o: protml.h molphy.h 366 ../../bin/distan.o: 367 ../../bin/distan.o: 368 ../../bin/distan.o: 369 ../../bin/distan.o: 370 ../../bin/distan.o: 371 ../../bin/distan.o: 372 ../../bin/distan.o: 373 ../../bin/distan.o: 374 ../../bin/distan.o: 375 ../../bin/distan.o: 376 ../../bin/distan.o: 377 ../../bin/distan.o: 378 ../../bin/distan.o: 379 ../../bin/distan.o: 380 ../../bin/distan.o: 381 ../../bin/distan.o: matrixut.h 382 ../../bin/distproc.o: tridist.h molphy.h 383 ../../bin/distproc.o: 384 ../../bin/distproc.o: 385 ../../bin/distproc.o: 386 ../../bin/distproc.o: 387 ../../bin/distproc.o: 388 ../../bin/distproc.o: 389 ../../bin/distproc.o: 390 ../../bin/distproc.o: 391 ../../bin/distproc.o: 392 ../../bin/distproc.o: 393 ../../bin/distproc.o: 394 ../../bin/distproc.o: 395 ../../bin/distproc.o: 396 ../../bin/distproc.o: 397 ../../bin/distproc.o: 398 ../../bin/distproc.o: matrixut.h 399 ../../bin/dyhfjtt.o: protml.h molphy.h 400 ../../bin/dyhfjtt.o: 401 ../../bin/dyhfjtt.o: 402 ../../bin/dyhfjtt.o: 403 ../../bin/dyhfjtt.o: 404 ../../bin/dyhfjtt.o: 405 ../../bin/dyhfjtt.o: 406 ../../bin/dyhfjtt.o: 407 ../../bin/dyhfjtt.o: 408 ../../bin/dyhfjtt.o: 409 ../../bin/dyhfjtt.o: 410 ../../bin/dyhfjtt.o: 411 ../../bin/dyhfjtt.o: 412 ../../bin/dyhfjtt.o: 413 ../../bin/dyhfjtt.o: 414 ../../bin/dyhfjtt.o: 415 ../../bin/dyhfjtt.o: matrixut.h 416 ../../bin/getseq.o: protml.h molphy.h 417 ../../bin/getseq.o: 418 ../../bin/getseq.o: 419 ../../bin/getseq.o: 420 ../../bin/getseq.o: 421 ../../bin/getseq.o: 422 ../../bin/getseq.o: 423 ../../bin/getseq.o: 424 ../../bin/getseq.o: 425 ../../bin/getseq.o: 426 ../../bin/getseq.o: 427 ../../bin/getseq.o: 428 ../../bin/getseq.o: 429 ../../bin/getseq.o: 430 ../../bin/getseq.o: 431 ../../bin/getseq.o: 432 ../../bin/getseq.o: matrixut.h 433 ../../bin/getseq.o: prot_tml.h 434 ../../bin/matrixut.o: 435 ../../bin/matrixut.o: 436 ../../bin/matrixut.o: 437 ../../bin/matrixut.o: 438 ../../bin/matrixut.o: 439 ../../bin/matrixut.o: 440 ../../bin/matrixut.o: 441 ../../bin/matrixut.o: matrixut.h 442 ../../bin/mlklhd.o: protml.h molphy.h 443 ../../bin/mlklhd.o: 444 ../../bin/mlklhd.o: 445 ../../bin/mlklhd.o: 446 ../../bin/mlklhd.o: 447 ../../bin/mlklhd.o: 448 ../../bin/mlklhd.o: 449 ../../bin/mlklhd.o: 450 ../../bin/mlklhd.o: 451 ../../bin/mlklhd.o: 452 ../../bin/mlklhd.o: 453 ../../bin/mlklhd.o: 454 ../../bin/mlklhd.o: 455 ../../bin/mlklhd.o: 456 ../../bin/mlklhd.o: 457 ../../bin/mlklhd.o: 458 ../../bin/mlklhd.o: matrixut.h 459 ../../bin/mltree.o: protml.h molphy.h 460 ../../bin/mltree.o: 461 ../../bin/mltree.o: 462 ../../bin/mltree.o: 463 ../../bin/mltree.o: 464 ../../bin/mltree.o: 465 ../../bin/mltree.o: 466 ../../bin/mltree.o: 467 ../../bin/mltree.o: 468 ../../bin/mltree.o: 469 ../../bin/mltree.o: 470 ../../bin/mltree.o: 471 ../../bin/mltree.o: 472 ../../bin/mltree.o: 473 ../../bin/mltree.o: 474 ../../bin/mltree.o: 475 ../../bin/mltree.o: matrixut.h 476 ../../bin/mtrev22.o: protml.h molphy.h 477 ../../bin/mtrev22.o: 478 ../../bin/mtrev22.o: 479 ../../bin/mtrev22.o: 480 ../../bin/mtrev22.o: 481 ../../bin/mtrev22.o: 482 ../../bin/mtrev22.o: 483 ../../bin/mtrev22.o: 484 ../../bin/mtrev22.o: 485 ../../bin/mtrev22.o: 486 ../../bin/mtrev22.o: 487 ../../bin/mtrev22.o: 488 ../../bin/mtrev22.o: 489 ../../bin/mtrev22.o: 490 ../../bin/mtrev22.o: 491 ../../bin/mtrev22.o: 492 ../../bin/mtrev22.o: matrixut.h 493 ../../bin/mtrev24.o: protml.h molphy.h 494 ../../bin/mtrev24.o: 495 ../../bin/mtrev24.o: 496 ../../bin/mtrev24.o: 497 ../../bin/mtrev24.o: 498 ../../bin/mtrev24.o: 499 ../../bin/mtrev24.o: 500 ../../bin/mtrev24.o: 501 ../../bin/mtrev24.o: 502 ../../bin/mtrev24.o: 503 ../../bin/mtrev24.o: 504 ../../bin/mtrev24.o: 505 ../../bin/mtrev24.o: 506 ../../bin/mtrev24.o: 507 ../../bin/mtrev24.o: 508 ../../bin/mtrev24.o: 509 ../../bin/mtrev24.o: matrixut.h 510 ../../bin/mygetopt.o: molphy.h 511 ../../bin/mygetopt.o: 512 ../../bin/mygetopt.o: 513 ../../bin/mygetopt.o: 514 ../../bin/mygetopt.o: 515 ../../bin/mygetopt.o: 516 ../../bin/mygetopt.o: 517 ../../bin/mygetopt.o: 518 ../../bin/mygetopt.o: 519 ../../bin/mygetopt.o: 520 ../../bin/mygetopt.o: 521 ../../bin/mygetopt.o: 522 ../../bin/mygetopt.o: 523 ../../bin/mygetopt.o: 524 ../../bin/mygetopt.o: 525 ../../bin/mygetopt.o: 526 ../../bin/njmtree.o: protml.h molphy.h 527 ../../bin/njmtree.o: 528 ../../bin/njmtree.o: 529 ../../bin/njmtree.o: 530 ../../bin/njmtree.o: 531 ../../bin/njmtree.o: 532 ../../bin/njmtree.o: 533 ../../bin/njmtree.o: 534 ../../bin/njmtree.o: 535 ../../bin/njmtree.o: 536 ../../bin/njmtree.o: 537 ../../bin/njmtree.o: 538 ../../bin/njmtree.o: 539 ../../bin/njmtree.o: 540 ../../bin/njmtree.o: 541 ../../bin/njmtree.o: 542 ../../bin/njmtree.o: matrixut.h 543 ../../bin/njproc.o: tridist.h molphy.h 544 ../../bin/njproc.o: 545 ../../bin/njproc.o: 546 ../../bin/njproc.o: 547 ../../bin/njproc.o: 548 ../../bin/njproc.o: 549 ../../bin/njproc.o: 550 ../../bin/njproc.o: 551 ../../bin/njproc.o: 552 ../../bin/njproc.o: 553 ../../bin/njproc.o: 554 ../../bin/njproc.o: 555 ../../bin/njproc.o: 556 ../../bin/njproc.o: 557 ../../bin/njproc.o: 558 ../../bin/njproc.o: 559 ../../bin/njproc.o: matrixut.h 560 ../../bin/njtree.o: protml.h molphy.h 561 ../../bin/njtree.o: 562 ../../bin/njtree.o: 563 ../../bin/njtree.o: 564 ../../bin/njtree.o: 565 ../../bin/njtree.o: 566 ../../bin/njtree.o: 567 ../../bin/njtree.o: 568 ../../bin/njtree.o: 569 ../../bin/njtree.o: 570 ../../bin/njtree.o: 571 ../../bin/njtree.o: 572 ../../bin/njtree.o: 573 ../../bin/njtree.o: 574 ../../bin/njtree.o: 575 ../../bin/njtree.o: 576 ../../bin/njtree.o: matrixut.h 577 ../../bin/nucproc.o: protml.h molphy.h 578 ../../bin/nucproc.o: 579 ../../bin/nucproc.o: 580 ../../bin/nucproc.o: 581 ../../bin/nucproc.o: 582 ../../bin/nucproc.o: 583 ../../bin/nucproc.o: 584 ../../bin/nucproc.o: 585 ../../bin/nucproc.o: 586 ../../bin/nucproc.o: 587 ../../bin/nucproc.o: 588 ../../bin/nucproc.o: 589 ../../bin/nucproc.o: 590 ../../bin/nucproc.o: 591 ../../bin/nucproc.o: 592 ../../bin/nucproc.o: 593 ../../bin/nucproc.o: matrixut.h 594 ../../bin/protml.o: protml.h molphy.h 595 ../../bin/protml.o: 596 ../../bin/protml.o: 597 ../../bin/protml.o: 598 ../../bin/protml.o: 599 ../../bin/protml.o: 600 ../../bin/protml.o: 601 ../../bin/protml.o: 602 ../../bin/protml.o: 603 ../../bin/protml.o: 604 ../../bin/protml.o: 605 ../../bin/protml.o: 606 ../../bin/protml.o: 607 ../../bin/protml.o: 608 ../../bin/protml.o: 609 ../../bin/protml.o: 610 ../../bin/protml.o: matrixut.h 611 ../../bin/protproc.o: protml.h molphy.h 612 ../../bin/protproc.o: 613 ../../bin/protproc.o: 614 ../../bin/protproc.o: 615 ../../bin/protproc.o: 616 ../../bin/protproc.o: 617 ../../bin/protproc.o: 618 ../../bin/protproc.o: 619 ../../bin/protproc.o: 620 ../../bin/protproc.o: 621 ../../bin/protproc.o: 622 ../../bin/protproc.o: 623 ../../bin/protproc.o: 624 ../../bin/protproc.o: 625 ../../bin/protproc.o: 626 ../../bin/protproc.o: 627 ../../bin/protproc.o: matrixut.h 628 ../../bin/protst.o: protst.h molphy.h 629 ../../bin/protst.o: 630 ../../bin/protst.o: 631 ../../bin/protst.o: 632 ../../bin/protst.o: 633 ../../bin/protst.o: 634 ../../bin/protst.o: 635 ../../bin/protst.o: 636 ../../bin/protst.o: 637 ../../bin/protst.o: 638 ../../bin/protst.o: 639 ../../bin/protst.o: 640 ../../bin/protst.o: 641 ../../bin/protst.o: 642 ../../bin/protst.o: 643 ../../bin/protst.o: 644 ../../bin/protst.o: matrixut.h 645 ../../bin/prtree.o: protml.h molphy.h 646 ../../bin/prtree.o: 647 ../../bin/prtree.o: 648 ../../bin/prtree.o: 649 ../../bin/prtree.o: 650 ../../bin/prtree.o: 651 ../../bin/prtree.o: 652 ../../bin/prtree.o: 653 ../../bin/prtree.o: 654 ../../bin/prtree.o: 655 ../../bin/prtree.o: 656 ../../bin/prtree.o: 657 ../../bin/prtree.o: 658 ../../bin/prtree.o: 659 ../../bin/prtree.o: 660 ../../bin/prtree.o: 661 ../../bin/prtree.o: matrixut.h 662 ../../bin/pstree.o: protml.h molphy.h 663 ../../bin/pstree.o: 664 ../../bin/pstree.o: 665 ../../bin/pstree.o: 666 ../../bin/pstree.o: 667 ../../bin/pstree.o: 668 ../../bin/pstree.o: 669 ../../bin/pstree.o: 670 ../../bin/pstree.o: 671 ../../bin/pstree.o: 672 ../../bin/pstree.o: 673 ../../bin/pstree.o: 674 ../../bin/pstree.o: 675 ../../bin/pstree.o: 676 ../../bin/pstree.o: 677 ../../bin/pstree.o: 678 ../../bin/pstree.o: matrixut.h 679 ../../bin/qltree.o: protml.h molphy.h 680 ../../bin/qltree.o: 681 ../../bin/qltree.o: 682 ../../bin/qltree.o: 683 ../../bin/qltree.o: 684 ../../bin/qltree.o: 685 ../../bin/qltree.o: 686 ../../bin/qltree.o: 687 ../../bin/qltree.o: 688 ../../bin/qltree.o: 689 ../../bin/qltree.o: 690 ../../bin/qltree.o: 691 ../../bin/qltree.o: 692 ../../bin/qltree.o: 693 ../../bin/qltree.o: 694 ../../bin/qltree.o: 695 ../../bin/qltree.o: matrixut.h 696 ../../bin/seqproc.o: protml.h molphy.h 697 ../../bin/seqproc.o: 698 ../../bin/seqproc.o: 699 ../../bin/seqproc.o: 700 ../../bin/seqproc.o: 701 ../../bin/seqproc.o: 702 ../../bin/seqproc.o: 703 ../../bin/seqproc.o: 704 ../../bin/seqproc.o: 705 ../../bin/seqproc.o: 706 ../../bin/seqproc.o: 707 ../../bin/seqproc.o: 708 ../../bin/seqproc.o: 709 ../../bin/seqproc.o: 710 ../../bin/seqproc.o: 711 ../../bin/seqproc.o: 712 ../../bin/seqproc.o: matrixut.h 713 ../../bin/seqstat.o: protst.h molphy.h 714 ../../bin/seqstat.o: 715 ../../bin/seqstat.o: 716 ../../bin/seqstat.o: 717 ../../bin/seqstat.o: 718 ../../bin/seqstat.o: 719 ../../bin/seqstat.o: 720 ../../bin/seqstat.o: 721 ../../bin/seqstat.o: 722 ../../bin/seqstat.o: 723 ../../bin/seqstat.o: 724 ../../bin/seqstat.o: 725 ../../bin/seqstat.o: 726 ../../bin/seqstat.o: 727 ../../bin/seqstat.o: 728 ../../bin/seqstat.o: 729 ../../bin/seqstat.o: matrixut.h 730 ../../bin/sltree.o: protml.h molphy.h 731 ../../bin/sltree.o: 732 ../../bin/sltree.o: 733 ../../bin/sltree.o: 734 ../../bin/sltree.o: 735 ../../bin/sltree.o: 736 ../../bin/sltree.o: 737 ../../bin/sltree.o: 738 ../../bin/sltree.o: 739 ../../bin/sltree.o: 740 ../../bin/sltree.o: 741 ../../bin/sltree.o: 742 ../../bin/sltree.o: 743 ../../bin/sltree.o: 744 ../../bin/sltree.o: 745 ../../bin/sltree.o: 746 ../../bin/sltree.o: matrixut.h 747 ../../bin/totalml.o: totalml.h molphy.h 748 ../../bin/totalml.o: 749 ../../bin/totalml.o: 750 ../../bin/totalml.o: 751 ../../bin/totalml.o: 752 ../../bin/totalml.o: 753 ../../bin/totalml.o: 754 ../../bin/totalml.o: 755 ../../bin/totalml.o: 756 ../../bin/totalml.o: 757 ../../bin/totalml.o: 758 ../../bin/totalml.o: 759 ../../bin/totalml.o: 760 ../../bin/totalml.o: 761 ../../bin/totalml.o: 762 ../../bin/totalml.o: 763 ../../bin/totalml.o: matrixut.h 764 ../../bin/tranprb.o: protml.h molphy.h 765 ../../bin/tranprb.o: 766 ../../bin/tranprb.o: 767 ../../bin/tranprb.o: 768 ../../bin/tranprb.o: 769 ../../bin/tranprb.o: 770 ../../bin/tranprb.o: 771 ../../bin/tranprb.o: 772 ../../bin/tranprb.o: 773 ../../bin/tranprb.o: 774 ../../bin/tranprb.o: 775 ../../bin/tranprb.o: 776 ../../bin/tranprb.o: 777 ../../bin/tranprb.o: 778 ../../bin/tranprb.o: 779 ../../bin/tranprb.o: 780 ../../bin/tranprb.o: matrixut.h 781 ../../bin/tridist.o: tridist.h molphy.h 782 ../../bin/tridist.o: 783 ../../bin/tridist.o: 784 ../../bin/tridist.o: 785 ../../bin/tridist.o: 786 ../../bin/tridist.o: 787 ../../bin/tridist.o: 788 ../../bin/tridist.o: 789 ../../bin/tridist.o: 790 ../../bin/tridist.o: 791 ../../bin/tridist.o: 792 ../../bin/tridist.o: 793 ../../bin/tridist.o: 794 ../../bin/tridist.o: 795 ../../bin/tridist.o: 796 ../../bin/tridist.o: 797 ../../bin/tridist.o: matrixut.h 798 ../../bin/triproc.o: tridist.h molphy.h 799 ../../bin/triproc.o: 800 ../../bin/triproc.o: 801 ../../bin/triproc.o: 802 ../../bin/triproc.o: 803 ../../bin/triproc.o: 804 ../../bin/triproc.o: 805 ../../bin/triproc.o: 806 ../../bin/triproc.o: 807 ../../bin/triproc.o: 808 ../../bin/triproc.o: 809 ../../bin/triproc.o: 810 ../../bin/triproc.o: 811 ../../bin/triproc.o: 812 ../../bin/triproc.o: 813 ../../bin/triproc.o: 814 ../../bin/triproc.o: matrixut.h 192 Dpstree.o: protml.h molphy.h matrixut.h 193 194 Ndistan.o: protml.h molphy.h matrixut.h 195 196 Njdist.o: tridist.h molphy.h matrixut.h 197 198 Nmlklhd.o: protml.h molphy.h matrixut.h 199 200 Nseqstat.o: protst.h molphy.h matrixut.h 201 202 Ntranprb.o: protml.h molphy.h matrixut.h 203 204 Nucml.o: protml.h molphy.h matrixut.h 205 206 Nucst.o: protst.h molphy.h matrixut.h 207 208 Nuctpm.o: protml.h molphy.h matrixut.h 209 210 Prottpm.o: protml.h molphy.h matrixut.h 211 212 altree.o: protml.h molphy.h matrixut.h 213 214 distan.o: protml.h molphy.h matrixut.h 215 216 distproc.o: tridist.h molphy.h matrixut.h 217 218 dyhfjtt.o: protml.h molphy.h matrixut.h 219 220 getseq.o: protml.h molphy.h matrixut.h prot_tml.h 221 222 matrixut.o: matrixut.h 223 224 mlklhd.o: protml.h molphy.h matrixut.h 225 226 mltree.o: protml.h molphy.h matrixut.h 227 228 mtrev22.o: protml.h molphy.h matrixut.h 229 230 mtrev24.o: protml.h molphy.h matrixut.h 231 232 mygetopt.o: molphy.h 233 234 njmtree.o: protml.h molphy.h matrixut.h 235 236 njproc.o: tridist.h molphy.h matrixut.h 237 238 njtree.o: protml.h molphy.h matrixut.h 239 240 nucproc.o: protml.h molphy.h matrixut.h 241 242 protml.o: protml.h molphy.h matrixut.h 243 244 protproc.o: protml.h molphy.h matrixut.h 245 246 protst.o: protst.h molphy.h matrixut.h 247 248 prtree.o: protml.h molphy.h matrixut.h 249 250 pstree.o: protml.h molphy.h matrixut.h 251 252 qltree.o: protml.h molphy.h matrixut.h 253 254 seqproc.o: protml.h molphy.h matrixut.h 255 256 seqstat.o: protst.h molphy.h matrixut.h 257 258 sltree.o: protml.h molphy.h matrixut.h 259 260 totalml.o: totalml.h molphy.h matrixut.h 261 262 tranprb.o: protml.h molphy.h matrixut.h 263 264 tridist.o: tridist.h molphy.h matrixut.h 265 266 triproc.o: tridist.h molphy.h matrixut.h -
trunk/GDE/Makefile
r1450 r1617 45 45 $(MAIN): $(ARCHS) 46 46 47 depend : $(ARCHS:.dummy=.depend)47 depends: $(ARCHS:.dummy=.depend) 48 48 49 49 %.depend: 50 @cp -p $(@D)/Makefile $(@D)/Makefile.old # save old Makefile 50 51 @$(MAKE) -C $(@D) -r \ 51 52 "LD_LIBRARY_PATH = ${LD_LIBRARY_PATH}" \ 52 "MAKEDEPEND INC = $(MAKEDEPENDINC)" \53 "MAKEDEPENDFLAGS = $(MAKEDEPENDFLAGS)" \ 53 54 "MAKEDEPEND=$(MAKEDEPEND)" \ 54 depend;55 cat $(@D)/Makefile \56 | sed -e "s/\/[^ ]*\/DUMMYINC\/[^ ]*\.h//g" \57 -e "s/\/usr\/[^ ]*\.h//g"\55 "ARBHOME=$(ARBHOME)" \ 56 depends; 57 @grep "^# DO NOT DELETE" $(@D)/Makefile >/dev/null # check whether sub Makefile has dependencies 58 @cat $(@D)/Makefile | sed \ 58 59 -e "s&$(ARBHOME)&\\\$$(ARBHOME)&g" \ 59 -e '/^[A-Za-z][A-Za-z0-9_]*\.o:[ ]*$$/d'\60 -e "s/[ /t]\.\// /g" \ 60 61 >$(@D)/Makefile.2 61 @mv $(@D)/Makefile.2 $(@D)/Makefile 62 @mv $(@D)/Makefile.old $(@D)/Makefile # restore old Makefile 63 @$(ARBHOME)/SOURCE_TOOLS/mv_if_diff $(@D)/Makefile.2 $(@D)/Makefile # update Makefile if changed 62 64 63 65 %.dummy: … … 75 77 "ARB = yes" \ 76 78 "MAIN = $(@F:.dummy=.a)" 79 80 # DO NOT DELETE -
trunk/GDE/PHYLIP/Makefile
r597 r1617 1 .SUFFIXES: .o .c 1 .SUFFIXES: .o .c .depend 2 2 3 3 LIBS = -lm -lc … … 37 37 $(ACC) -c $(cflags) $< 38 38 39 depend: 40 makedepend $(MAKEDEPENDINC) -p ../../bin/ $(PROGS:%=%.c) 39 DEPENDS = $(notdir $(PROGS:%=%.depend)) 40 depends: $(DEPENDS) 41 @cat $(DEPENDS) | grep -v '^#' >>Makefile 42 @rm $(DEPENDS) 43 $(DEPENDS): depend.init 44 depend.init: 45 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 46 .c.depend: 47 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 41 48 42 49 clean: … … 44 51 # DO NOT DELETE THIS LINE -- make depend depends on it. 45 52 46 ../../bin/clique.o: phylip.h 47 ../../bin/clique.o: 48 ../../bin/clique.o: 49 ../../bin/clique.o: 50 ../../bin/clique.o: 51 ../../bin/clique.o: 52 ../../bin/clique.o: 53 ../../bin/clique.o: 54 ../../bin/clique.o: 55 ../../bin/clique.o: 56 ../../bin/clique.o: 57 ../../bin/clique.o: 58 ../../bin/consense.o: phylip.h 59 ../../bin/consense.o: 60 ../../bin/consense.o: 61 ../../bin/consense.o: 62 ../../bin/consense.o: 63 ../../bin/consense.o: 64 ../../bin/consense.o: 65 ../../bin/consense.o: 66 ../../bin/consense.o: 67 ../../bin/consense.o: 68 ../../bin/consense.o: 69 ../../bin/consense.o: 70 ../../bin/consense.o: 71 ../../bin/contml.o: phylip.h 72 ../../bin/contml.o: 73 ../../bin/contml.o: 74 ../../bin/contml.o: 75 ../../bin/contml.o: 76 ../../bin/contml.o: 77 ../../bin/contml.o: 78 ../../bin/contml.o: 79 ../../bin/contml.o: 80 ../../bin/contml.o: 81 ../../bin/contml.o: 82 ../../bin/contml.o: 83 ../../bin/contrast.o: phylip.h 84 ../../bin/contrast.o: 85 ../../bin/contrast.o: 86 ../../bin/contrast.o: 87 ../../bin/contrast.o: 88 ../../bin/contrast.o: 89 ../../bin/contrast.o: 90 ../../bin/contrast.o: 91 ../../bin/contrast.o: 92 ../../bin/contrast.o: 93 ../../bin/contrast.o: 94 ../../bin/contrast.o: 95 ../../bin/contrast.o: 96 ../../bin/dnacomp.o: phylip.h 97 ../../bin/dnacomp.o: 98 ../../bin/dnacomp.o: 99 ../../bin/dnacomp.o: 100 ../../bin/dnacomp.o: 101 ../../bin/dnacomp.o: 102 ../../bin/dnacomp.o: 103 ../../bin/dnacomp.o: 104 ../../bin/dnacomp.o: 105 ../../bin/dnacomp.o: 106 ../../bin/dnacomp.o: 107 ../../bin/dnacomp.o: 108 ../../bin/dnadist.o: phylip.h 109 ../../bin/dnadist.o: 110 ../../bin/dnadist.o: 111 ../../bin/dnadist.o: 112 ../../bin/dnadist.o: 113 ../../bin/dnadist.o: 114 ../../bin/dnadist.o: 115 ../../bin/dnadist.o: 116 ../../bin/dnadist.o: 117 ../../bin/dnadist.o: 118 ../../bin/dnadist.o: 119 ../../bin/dnadist.o: 120 ../../bin/dnainvar.o: phylip.h 121 ../../bin/dnainvar.o: 122 ../../bin/dnainvar.o: 123 ../../bin/dnainvar.o: 124 ../../bin/dnainvar.o: 125 ../../bin/dnainvar.o: 126 ../../bin/dnainvar.o: 127 ../../bin/dnainvar.o: 128 ../../bin/dnainvar.o: 129 ../../bin/dnainvar.o: 130 ../../bin/dnainvar.o: 131 ../../bin/dnainvar.o: 132 ../../bin/dnainvar.o: 133 ../../bin/dnaml.o: phylip.h 134 ../../bin/dnaml.o: 135 ../../bin/dnaml.o: 136 ../../bin/dnaml.o: 137 ../../bin/dnaml.o: 138 ../../bin/dnaml.o: 139 ../../bin/dnaml.o: 140 ../../bin/dnaml.o: 141 ../../bin/dnaml.o: 142 ../../bin/dnaml.o: 143 ../../bin/dnaml.o: 144 ../../bin/dnaml.o: 145 ../../bin/dnamlk.o: phylip.h 146 ../../bin/dnamlk.o: 147 ../../bin/dnamlk.o: 148 ../../bin/dnamlk.o: 149 ../../bin/dnamlk.o: 150 ../../bin/dnamlk.o: 151 ../../bin/dnamlk.o: 152 ../../bin/dnamlk.o: 153 ../../bin/dnamlk.o: 154 ../../bin/dnamlk.o: 155 ../../bin/dnamlk.o: 156 ../../bin/dnamlk.o: 157 ../../bin/dnamove.o: phylip.h 158 ../../bin/dnamove.o: 159 ../../bin/dnamove.o: 160 ../../bin/dnamove.o: 161 ../../bin/dnamove.o: 162 ../../bin/dnamove.o: 163 ../../bin/dnamove.o: 164 ../../bin/dnamove.o: 165 ../../bin/dnamove.o: 166 ../../bin/dnamove.o: 167 ../../bin/dnamove.o: 168 ../../bin/dnamove.o: 169 ../../bin/dnapars.o: phylip.h 170 ../../bin/dnapars.o: 171 ../../bin/dnapars.o: 172 ../../bin/dnapars.o: 173 ../../bin/dnapars.o: 174 ../../bin/dnapars.o: 175 ../../bin/dnapars.o: 176 ../../bin/dnapars.o: 177 ../../bin/dnapars.o: 178 ../../bin/dnapars.o: 179 ../../bin/dnapars.o: 180 ../../bin/dnapars.o: 181 ../../bin/dnapenny.o: phylip.h 182 ../../bin/dnapenny.o: 183 ../../bin/dnapenny.o: 184 ../../bin/dnapenny.o: 185 ../../bin/dnapenny.o: 186 ../../bin/dnapenny.o: 187 ../../bin/dnapenny.o: 188 ../../bin/dnapenny.o: 189 ../../bin/dnapenny.o: 190 ../../bin/dnapenny.o: 191 ../../bin/dnapenny.o: 192 ../../bin/dnapenny.o: 193 ../../bin/dnapenny.o: 194 ../../bin/dolmove.o: phylip.h 195 ../../bin/dolmove.o: 196 ../../bin/dolmove.o: 197 ../../bin/dolmove.o: 198 ../../bin/dolmove.o: 199 ../../bin/dolmove.o: 200 ../../bin/dolmove.o: 201 ../../bin/dolmove.o: 202 ../../bin/dolmove.o: 203 ../../bin/dolmove.o: 204 ../../bin/dolmove.o: 205 ../../bin/dolmove.o: 206 ../../bin/dollop.o: phylip.h 207 ../../bin/dollop.o: 208 ../../bin/dollop.o: 209 ../../bin/dollop.o: 210 ../../bin/dollop.o: 211 ../../bin/dollop.o: 212 ../../bin/dollop.o: 213 ../../bin/dollop.o: 214 ../../bin/dollop.o: 215 ../../bin/dollop.o: 216 ../../bin/dollop.o: 217 ../../bin/dollop.o: 218 ../../bin/dolpenny.o: phylip.h 219 ../../bin/dolpenny.o: 220 ../../bin/dolpenny.o: 221 ../../bin/dolpenny.o: 222 ../../bin/dolpenny.o: 223 ../../bin/dolpenny.o: 224 ../../bin/dolpenny.o: 225 ../../bin/dolpenny.o: 226 ../../bin/dolpenny.o: 227 ../../bin/dolpenny.o: 228 ../../bin/dolpenny.o: 229 ../../bin/dolpenny.o: 230 ../../bin/dolpenny.o: 231 ../../bin/drawgram.o: drawgraphics.h phylip.h 232 ../../bin/drawgram.o: 233 ../../bin/drawgram.o: 234 ../../bin/drawgram.o: 235 ../../bin/drawgram.o: 236 ../../bin/drawgram.o: 237 ../../bin/drawgram.o: 238 ../../bin/drawgram.o: 239 ../../bin/drawgram.o: 240 ../../bin/drawgram.o: 241 ../../bin/drawgram.o: 242 ../../bin/drawgram.o: 243 ../../bin/drawgram.o: 244 ../../bin/drawgram.o: 245 ../../bin/drawtree.o: drawgraphics.h phylip.h 246 ../../bin/drawtree.o: 247 ../../bin/drawtree.o: 248 ../../bin/drawtree.o: 249 ../../bin/drawtree.o: 250 ../../bin/drawtree.o: 251 ../../bin/drawtree.o: 252 ../../bin/drawtree.o: 253 ../../bin/drawtree.o: 254 ../../bin/drawtree.o: 255 ../../bin/drawtree.o: 256 ../../bin/drawtree.o: 257 ../../bin/drawtree.o: 258 ../../bin/drawtree.o: 259 ../../bin/factor.o: phylip.h 260 ../../bin/factor.o: 261 ../../bin/factor.o: 262 ../../bin/factor.o: 263 ../../bin/factor.o: 264 ../../bin/factor.o: 265 ../../bin/factor.o: 266 ../../bin/factor.o: 267 ../../bin/factor.o: 268 ../../bin/factor.o: 269 ../../bin/factor.o: 270 ../../bin/factor.o: 271 ../../bin/fitch.o: phylip.h 272 ../../bin/fitch.o: 273 ../../bin/fitch.o: 274 ../../bin/fitch.o: 275 ../../bin/fitch.o: 276 ../../bin/fitch.o: 277 ../../bin/fitch.o: 278 ../../bin/fitch.o: 279 ../../bin/fitch.o: 280 ../../bin/fitch.o: 281 ../../bin/fitch.o: 282 ../../bin/fitch.o: 283 ../../bin/gendist.o: phylip.h 284 ../../bin/gendist.o: 285 ../../bin/gendist.o: 286 ../../bin/gendist.o: 287 ../../bin/gendist.o: 288 ../../bin/gendist.o: 289 ../../bin/gendist.o: 290 ../../bin/gendist.o: 291 ../../bin/gendist.o: 292 ../../bin/gendist.o: 293 ../../bin/gendist.o: 294 ../../bin/gendist.o: 295 ../../bin/kitsch.o: phylip.h 296 ../../bin/kitsch.o: 297 ../../bin/kitsch.o: 298 ../../bin/kitsch.o: 299 ../../bin/kitsch.o: 300 ../../bin/kitsch.o: 301 ../../bin/kitsch.o: 302 ../../bin/kitsch.o: 303 ../../bin/kitsch.o: 304 ../../bin/kitsch.o: 305 ../../bin/kitsch.o: 306 ../../bin/kitsch.o: 307 ../../bin/mix.o: phylip.h 308 ../../bin/mix.o: 309 ../../bin/mix.o: 310 ../../bin/mix.o: 311 ../../bin/mix.o: 312 ../../bin/mix.o: 313 ../../bin/mix.o: 314 ../../bin/mix.o: 315 ../../bin/mix.o: 316 ../../bin/mix.o: 317 ../../bin/mix.o: 318 ../../bin/mix.o: 319 ../../bin/move.o: phylip.h 320 ../../bin/move.o: 321 ../../bin/move.o: 322 ../../bin/move.o: 323 ../../bin/move.o: 324 ../../bin/move.o: 325 ../../bin/move.o: 326 ../../bin/move.o: 327 ../../bin/move.o: 328 ../../bin/move.o: 329 ../../bin/move.o: 330 ../../bin/move.o: 331 ../../bin/neighbor.o: phylip.h 332 ../../bin/neighbor.o: 333 ../../bin/neighbor.o: 334 ../../bin/neighbor.o: 335 ../../bin/neighbor.o: 336 ../../bin/neighbor.o: 337 ../../bin/neighbor.o: 338 ../../bin/neighbor.o: 339 ../../bin/neighbor.o: 340 ../../bin/neighbor.o: 341 ../../bin/neighbor.o: 342 ../../bin/neighbor.o: 343 ../../bin/neighbor.o: 344 ../../bin/penny.o: phylip.h 345 ../../bin/penny.o: 346 ../../bin/penny.o: 347 ../../bin/penny.o: 348 ../../bin/penny.o: 349 ../../bin/penny.o: 350 ../../bin/penny.o: 351 ../../bin/penny.o: 352 ../../bin/penny.o: 353 ../../bin/penny.o: 354 ../../bin/penny.o: 355 ../../bin/penny.o: 356 ../../bin/protdist.o: phylip.h 357 ../../bin/protdist.o: 358 ../../bin/protdist.o: 359 ../../bin/protdist.o: 360 ../../bin/protdist.o: 361 ../../bin/protdist.o: 362 ../../bin/protdist.o: 363 ../../bin/protdist.o: 364 ../../bin/protdist.o: 365 ../../bin/protdist.o: 366 ../../bin/protdist.o: 367 ../../bin/protdist.o: 368 ../../bin/protdist.o: 369 ../../bin/protpars.o: phylip.h 370 ../../bin/protpars.o: 371 ../../bin/protpars.o: 372 ../../bin/protpars.o: 373 ../../bin/protpars.o: 374 ../../bin/protpars.o: 375 ../../bin/protpars.o: 376 ../../bin/protpars.o: 377 ../../bin/protpars.o: 378 ../../bin/protpars.o: 379 ../../bin/protpars.o: 380 ../../bin/protpars.o: 381 ../../bin/protpars.o: 382 ../../bin/restml.o: phylip.h 383 ../../bin/restml.o: 384 ../../bin/restml.o: 385 ../../bin/restml.o: 386 ../../bin/restml.o: 387 ../../bin/restml.o: 388 ../../bin/restml.o: 389 ../../bin/restml.o: 390 ../../bin/restml.o: 391 ../../bin/restml.o: 392 ../../bin/restml.o: 393 ../../bin/restml.o: 394 ../../bin/retree.o: phylip.h 395 ../../bin/retree.o: 396 ../../bin/retree.o: 397 ../../bin/retree.o: 398 ../../bin/retree.o: 399 ../../bin/retree.o: 400 ../../bin/retree.o: 401 ../../bin/retree.o: 402 ../../bin/retree.o: 403 ../../bin/retree.o: 404 ../../bin/retree.o: 405 ../../bin/retree.o: 406 ../../bin/seqboot.o: phylip.h 407 ../../bin/seqboot.o: 408 ../../bin/seqboot.o: 409 ../../bin/seqboot.o: 410 ../../bin/seqboot.o: 411 ../../bin/seqboot.o: 412 ../../bin/seqboot.o: 413 ../../bin/seqboot.o: 414 ../../bin/seqboot.o: 415 ../../bin/seqboot.o: 416 ../../bin/seqboot.o: 417 ../../bin/seqboot.o: 53 clique.o: phylip.h 54 55 consense.o: phylip.h 56 57 contml.o: phylip.h 58 59 contrast.o: phylip.h 60 61 dnacomp.o: phylip.h 62 63 dnadist.o: phylip.h 64 65 dnainvar.o: phylip.h 66 67 dnaml.o: phylip.h 68 69 dnamlk.o: phylip.h 70 71 dnamove.o: phylip.h 72 73 dnapars.o: phylip.h 74 75 dnapenny.o: phylip.h 76 77 dolmove.o: phylip.h 78 79 dollop.o: phylip.h 80 81 dolpenny.o: phylip.h 82 83 drawgram.o: drawgraphics.h phylip.h 84 85 drawtree.o: drawgraphics.h phylip.h 86 87 factor.o: phylip.h 88 89 fitch.o: phylip.h 90 91 gendist.o: phylip.h 92 93 kitsch.o: phylip.h 94 95 mix.o: phylip.h 96 97 move.o: phylip.h 98 99 neighbor.o: phylip.h 100 101 penny.o: phylip.h 102 103 protdist.o: phylip.h 104 105 protpars.o: phylip.h 106 107 restml.o: phylip.h 108 109 retree.o: phylip.h 110 111 seqboot.o: phylip.h -
trunk/GDE/SUPPORT/Makefile
r747 r1617 1 .SUFFIXES: .o .c . cxx1 .SUFFIXES: .o .c .depend 2 2 3 3 OBJECT = CAP2.o Restriction.o Zuk_to_gen.o count.o findall.o lsadt.o \ … … 10 10 $(ACC) $(cflags) -o $@ $< $(AINCLUDES) $(LIB) -lm 11 11 12 depend: 13 makedepend -o '' -p ../../bin/ $(MAKEDEPENDINC) $(OBJECT:.o=.c*) 12 DEPENDS = $(OBJECT:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 14 22 15 23 # DO NOT DELETE THIS LINE -- make depend depends on it. 16 24 17 ../../bin/CAP2: 18 ../../bin/CAP2: 19 ../../bin/CAP2: 20 ../../bin/CAP2: 21 ../../bin/CAP2: 22 ../../bin/CAP2: 23 ../../bin/CAP2: 24 ../../bin/CAP2: 25 ../../bin/Restriction: Flatio.c 26 ../../bin/Restriction: 27 ../../bin/Restriction: 28 ../../bin/Restriction: 29 ../../bin/Restriction: 30 ../../bin/Restriction: 31 ../../bin/Restriction: 32 ../../bin/Restriction: 33 ../../bin/Zuk_to_gen: 34 ../../bin/Zuk_to_gen: 35 ../../bin/Zuk_to_gen: 36 ../../bin/Zuk_to_gen: 37 ../../bin/Zuk_to_gen: 38 ../../bin/Zuk_to_gen: 39 ../../bin/Zuk_to_gen: 40 ../../bin/Zuk_to_gen: 41 ../../bin/count: 42 ../../bin/count: 43 ../../bin/count: 44 ../../bin/count: Flatio.c 45 ../../bin/count: 46 ../../bin/count: 47 ../../bin/count: 48 ../../bin/count: 49 ../../bin/count: 50 ../../bin/count: 51 ../../bin/findall: Flatio.c 52 ../../bin/findall: 53 ../../bin/findall: 54 ../../bin/findall: 55 ../../bin/findall: 56 ../../bin/findall: 57 ../../bin/findall: 58 ../../bin/findall: 59 ../../bin/lsadt: 60 ../../bin/lsadt: 61 ../../bin/lsadt: 62 ../../bin/lsadt: 63 ../../bin/lsadt: 64 ../../bin/lsadt: 65 ../../bin/lsadt: 66 ../../bin/lsadt: 67 ../../bin/lsadt: 68 ../../bin/lsadt: 69 ../../bin/lsadt: 70 ../../bin/lsadt: 71 ../../bin/lsadt: 72 ../../bin/lsadt: 73 ../../bin/lsadt: 74 ../../bin/lsadt: 75 ../../bin/lsadt: 76 ../../bin/lsadt: 77 ../../bin/lsadt: 78 ../../bin/sho_helix: Flatio.c 79 ../../bin/sho_helix: 80 ../../bin/sho_helix: 81 ../../bin/sho_helix: 82 ../../bin/sho_helix: 83 ../../bin/sho_helix: 84 ../../bin/sho_helix: 85 ../../bin/sho_helix: 86 ../../bin/varpos: Flatio.c 87 ../../bin/varpos: 88 ../../bin/varpos: 89 ../../bin/varpos: 90 ../../bin/varpos: 91 ../../bin/varpos: 92 ../../bin/varpos: 93 ../../bin/varpos: 25 Restriction.o: Flatio.c 26 27 count.o: Flatio.c 28 29 findall.o: Flatio.c 30 31 sho_helix.o: Flatio.c 32 33 varpos.o: Flatio.c -
trunk/GDE/TREEPUZZLE/Makefile
r597 r1617 1 1 2 .SUFFIXES: .o .c 2 .SUFFIXES: .o .c .depend 3 3 4 4 OBJECT = \ … … 28 28 -rm src/*.o 29 29 30 depend: 31 makedepend $(MAKEDEPENDINC) $(OBJECT:.o=.c) 30 DEPENDS = $(OBJECT:.o=.depend) 31 depends: $(DEPENDS) 32 @cat $(DEPENDS) | grep -v '^#' >>Makefile 33 @rm $(DEPENDS) 34 $(DEPENDS): depend.init 35 depend.init: 36 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 37 .c.depend: 38 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 39 32 40 33 41 # DO NOT DELETE 34 42 35 src/gamma.o: 36 src/gamma.o: 37 src/gamma.o: 38 src/gamma.o: src/util.h 39 src/gamma.o: 40 src/gamma.o: 41 src/gamma.o: 42 src/gamma.o: 43 src/gamma.o: 44 src/gamma.o: 45 src/gamma.o: src/gamma.h 46 src/ml1.o: 47 src/ml1.o: 48 src/ml1.o: 49 src/ml1.o: 50 src/ml1.o: 51 src/ml1.o: 52 src/ml1.o: 53 src/ml1.o: 54 src/ml1.o: 55 src/ml1.o: 56 src/ml1.o: 57 src/ml1.o: src/util.h 58 src/ml1.o: src/ml.h 59 src/ml2.o: 60 src/ml2.o: 61 src/ml2.o: 62 src/ml2.o: 63 src/ml2.o: 64 src/ml2.o: 65 src/ml2.o: 66 src/ml2.o: 67 src/ml2.o: 68 src/ml2.o: 69 src/ml2.o: 70 src/ml2.o: src/util.h 71 src/ml2.o: src/ml.h 72 src/ml3.o: 73 src/ml3.o: 74 src/ml3.o: 75 src/ml3.o: 76 src/ml3.o: 77 src/ml3.o: 78 src/ml3.o: 79 src/ml3.o: 80 src/ml3.o: 81 src/ml3.o: 82 src/ml3.o: src/util.h src/ml.h 83 src/ml3.o: src/gamma.h 84 src/model1.o: 85 src/model1.o: 86 src/model1.o: 87 src/model1.o: 88 src/model1.o: 89 src/model1.o: 90 src/model1.o: 91 src/model1.o: src/util.h 92 src/model1.o: 93 src/model1.o: 94 src/model1.o: src/ml.h 95 src/model2.o: 96 src/model2.o: 97 src/model2.o: 98 src/model2.o: 99 src/model2.o: 100 src/model2.o: 101 src/model2.o: 102 src/model2.o: src/util.h 103 src/model2.o: 104 src/model2.o: 105 src/model2.o: src/ml.h 106 src/puzzle1.o: src/puzzle.h 107 src/puzzle1.o: 108 src/puzzle1.o: 109 src/puzzle1.o: 110 src/puzzle1.o: 111 src/puzzle1.o: 112 src/puzzle1.o: 113 src/puzzle1.o: 114 src/puzzle1.o: 115 src/puzzle1.o: 116 src/puzzle1.o: 117 src/puzzle1.o: 118 src/puzzle1.o: 119 src/puzzle1.o: 120 src/puzzle1.o: 121 src/puzzle1.o: 122 src/puzzle1.o: src/util.h src/ml.h src/gamma.h 123 src/puzzle2.o: src/puzzle.h 124 src/puzzle2.o: 125 src/puzzle2.o: 126 src/puzzle2.o: 127 src/puzzle2.o: 128 src/puzzle2.o: 129 src/puzzle2.o: 130 src/puzzle2.o: 131 src/puzzle2.o: 132 src/puzzle2.o: 133 src/puzzle2.o: 134 src/puzzle2.o: 135 src/puzzle2.o: 136 src/puzzle2.o: 137 src/puzzle2.o: 138 src/puzzle2.o: 139 src/puzzle2.o: src/util.h src/ml.h 140 src/sched.o: 141 src/sched.o: 142 src/sched.o: 143 src/sched.o: 144 src/sched.o: 145 src/sched.o: 146 src/sched.o: 147 src/sched.o: 148 src/sched.o: 149 src/sched.o: 150 src/sched.o: src/sched.h src/util.h 151 src/sched.o: 152 src/util.o: src/util.h 153 src/util.o: 154 src/util.o: 155 src/util.o: 156 src/util.o: 157 src/util.o: 158 src/util.o: 159 src/util.o: 160 src/util.o: 161 src/util.o: 162 src/util.o: 43 src/gamma.o: src/util.h src/gamma.h 44 45 src/ml1.o: src/util.h src/ml.h 46 47 src/ml2.o: src/util.h src/ml.h 48 49 src/ml3.o: src/util.h src/ml.h src/gamma.h 50 51 src/model1.o: src/util.h src/ml.h 52 53 src/model2.o: src/util.h src/ml.h 54 55 src/puzzle1.o: src/puzzle.h src/util.h src/ml.h src/gamma.h 56 57 src/puzzle2.o: src/puzzle.h src/util.h src/ml.h 58 59 src/sched.o: src/sched.h src/util.h 60 61 src/util.o: src/util.h -
trunk/GENOM/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx .c 3 .SUFFIXES: .o .cxx .c .depend 4 4 5 5 CPP_OBJECTS = \ … … 37 37 # clean 38 38 39 depend: 40 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 41 # DO NOT DELETE THIS LINE -- make depend depends on it. 39 DEPENDS = $(CPP_OBJECTS:.o=.depend) 40 depends: $(DEPENDS) 41 @cat $(DEPENDS) | grep -v '^#' >>Makefile 42 @rm $(DEPENDS) 43 $(DEPENDS): depend.init 44 depend.init: 45 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 46 .cxx.depend: 47 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 48 49 # DO NOT DELETE 42 50 43 51 GEN_read.o: $(ARBHOME)/INCLUDE/arbdb.h … … 48 56 GEN_read.o: $(ARBHOME)/INCLUDE/aw_root.hxx 49 57 GEN_read.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx 50 GEN_read.o: $(ARBHOME)/INCLUDE/inline.h GEN_local.hxx 51 GEN_read.o: GEN.hxx$(ARBHOME)/INCLUDE/aw_window.hxx58 GEN_read.o: $(ARBHOME)/INCLUDE/inline.h GEN_local.hxx GEN.hxx 59 GEN_read.o: $(ARBHOME)/INCLUDE/aw_window.hxx 52 60 GEN_read.o: $(ARBHOME)/INCLUDE/aw_device.hxx 53 61 GEN_read.o: $(ARBHOME)/INCLUDE/adGene.h 62 54 63 GEN_db.o: $(ARBHOME)/INCLUDE/arbdb.h 55 64 GEN_db.o: $(ARBHOME)/INCLUDE/arb_assert.h 56 65 GEN_db.o: $(ARBHOME)/INCLUDE/ad_prot.h 57 66 GEN_db.o: $(ARBHOME)/INCLUDE/arbdbt.h 58 GEN_db.o: $(ARBHOME)/INCLUDE/ad_t_prot.h GEN_local.hxx 59 GEN_db.o: GEN.hxx $(ARBHOME)/INCLUDE/aw_window.hxx 67 GEN_db.o: $(ARBHOME)/INCLUDE/ad_t_prot.h GEN_local.hxx GEN.hxx 68 GEN_db.o: $(ARBHOME)/INCLUDE/aw_window.hxx 69 GEN_db.o: $(ARBHOME)/INCLUDE/aw_root.hxx 60 70 GEN_db.o: $(ARBHOME)/INCLUDE/aw_device.hxx 61 71 GEN_db.o: $(ARBHOME)/INCLUDE/adGene.h 72 62 73 GEN_interface.o: $(ARBHOME)/INCLUDE/awt.hxx 63 74 GEN_interface.o: $(ARBHOME)/INCLUDE/arb_assert.h 64 75 GEN_interface.o: $(ARBHOME)/INCLUDE/aw_window.hxx 76 GEN_interface.o: $(ARBHOME)/INCLUDE/aw_root.hxx 65 77 GEN_interface.o: $(ARBHOME)/INCLUDE/aw_device.hxx 66 78 GEN_interface.o: $(ARBHOME)/INCLUDE/arbdb.h … … 71 83 GEN_interface.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 72 84 GEN_interface.o: $(ARBHOME)/INCLUDE/probe_design.hxx 73 GEN_interface.o: $(ARBHOME)/INCLUDE/ntree.hxx 74 GEN_interface.o: ./../NTREE/ad_spec.hxx ./../NTREE/nt_internal.h 75 GEN_interface.o: GEN_local.hxx GEN.hxx 85 GEN_interface.o: $(ARBHOME)/INCLUDE/ntree.hxx ../NTREE/ad_spec.hxx 86 GEN_interface.o: ../NTREE/nt_internal.h GEN_local.hxx GEN.hxx 76 87 GEN_interface.o: $(ARBHOME)/INCLUDE/adGene.h GEN_nds.hxx 77 GEN_map.o: $(ARBHOME)/INCLUDE/arbdb.h 88 89 GEN_map.o: $(ARBHOME)/INCLUDE/arbdb.h 78 90 GEN_map.o: $(ARBHOME)/INCLUDE/arb_assert.h 79 91 GEN_map.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 86 98 GEN_map.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 87 99 GEN_map.o: $(ARBHOME)/INCLUDE/aw_question.hxx 100 GEN_map.o: $(ARBHOME)/INCLUDE/arbtools.h 88 101 GEN_map.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 89 102 GEN_map.o: $(ARBHOME)/INCLUDE/awt.hxx … … 91 104 GEN_map.o: $(ARBHOME)/INCLUDE/awt_input_mask.hxx 92 105 GEN_map.o: $(ARBHOME)/INCLUDE/smartptr.h 93 GEN_map.o: $(ARBHOME)/INCLUDE/awt_hotkeys.hxx GEN_local.hxx 94 GEN_map.o: GEN.hxx $(ARBHOME)/INCLUDE/adGene.h GEN_gene.hxx95 GEN_map.o: GEN_graphic.hxx96 GEN_map.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx97 GEN_map.o: GEN_nds.hxx EXP.hxx ./../NTREE/ad_spec.hxx 106 GEN_map.o: $(ARBHOME)/INCLUDE/awt_hotkeys.hxx GEN_local.hxx GEN.hxx 107 GEN_map.o: $(ARBHOME)/INCLUDE/adGene.h GEN_gene.hxx GEN_graphic.hxx 108 GEN_map.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx GEN_nds.hxx 109 GEN_map.o: GEN_interface.hxx EXP.hxx EXP_interface.hxx ../NTREE/ad_spec.hxx 110 98 111 GEN_graphic.o: $(ARBHOME)/INCLUDE/arbdb.h 99 112 GEN_graphic.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 107 120 GEN_graphic.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 108 121 GEN_graphic.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 109 GEN_graphic.o: $(ARBHOME)/INCLUDE/awt.hxx GEN_local.hxx 110 GEN_graphic.o: GEN.hxx $(ARBHOME)/INCLUDE/adGene.h111 GEN_graphic.o: GEN_g ene.hxx GEN_graphic.hxx112 GEN_graphic.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 122 GEN_graphic.o: $(ARBHOME)/INCLUDE/awt.hxx GEN_local.hxx GEN.hxx 123 GEN_graphic.o: $(ARBHOME)/INCLUDE/adGene.h GEN_gene.hxx 124 GEN_graphic.o: GEN_graphic.hxx $(ARBHOME)/INCLUDE/aw_color_groups.hxx 125 113 126 GEN_gene.o: $(ARBHOME)/INCLUDE/arbdb.h 114 127 GEN_gene.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 119 132 GEN_gene.o: $(ARBHOME)/INCLUDE/aw_device.hxx GEN.hxx 120 133 GEN_gene.o: $(ARBHOME)/INCLUDE/aw_window.hxx 121 GEN_gene.o: $(ARBHOME)/INCLUDE/adGene.h GEN_gene.hxx 122 GEN_gene.o: GEN_local.hxx GEN_nds.hxx 123 GEN_nds.o: $(ARBHOME)/INCLUDE/arbdb.h 134 GEN_gene.o: $(ARBHOME)/INCLUDE/adGene.h GEN_gene.hxx GEN_local.hxx 135 GEN_gene.o: GEN_nds.hxx 136 137 GEN_nds.o: $(ARBHOME)/INCLUDE/arbdb.h 124 138 GEN_nds.o: $(ARBHOME)/INCLUDE/arb_assert.h 125 139 GEN_nds.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 131 145 GEN_nds.o: $(ARBHOME)/INCLUDE/awt.hxx 132 146 GEN_nds.o: $(ARBHOME)/INCLUDE/awt_nds.hxx GEN_interface.hxx 147 133 148 GEN_color_groups.o: GEN_color_groups.hxx 149 134 150 EXP_interface.o: $(ARBHOME)/INCLUDE/awt.hxx 135 151 EXP_interface.o: $(ARBHOME)/INCLUDE/arb_assert.h 136 152 EXP_interface.o: $(ARBHOME)/INCLUDE/aw_window.hxx 153 EXP_interface.o: $(ARBHOME)/INCLUDE/aw_root.hxx 137 154 EXP_interface.o: $(ARBHOME)/INCLUDE/aw_device.hxx 138 155 EXP_interface.o: $(ARBHOME)/INCLUDE/arbdb.h … … 144 161 EXP_interface.o: EXP_interface.hxx EXP_local.hxx GEN.hxx 145 162 EXP_interface.o: $(ARBHOME)/INCLUDE/adGene.h GEN_local.hxx 146 EXP_interface.o: GEN_interface.hxx ./../NTREE/ad_spec.hxx 147 EXP_interface.o: ./../NTREE/nt_internal.h 163 EXP_interface.o: GEN_interface.hxx ../NTREE/ad_spec.hxx 164 EXP_interface.o: ../NTREE/nt_internal.h 165 148 166 EXP_main.o: $(ARBHOME)/INCLUDE/awt.hxx 149 167 EXP_main.o: $(ARBHOME)/INCLUDE/arb_assert.h 150 168 EXP_main.o: $(ARBHOME)/INCLUDE/aw_window.hxx 169 EXP_main.o: $(ARBHOME)/INCLUDE/aw_root.hxx 151 170 EXP_main.o: $(ARBHOME)/INCLUDE/aw_device.hxx 152 EXP_main.o: $(ARBHOME)/INCLUDE/arbdb.h 171 EXP_main.o: $(ARBHOME)/INCLUDE/arbdb.h 153 172 EXP_main.o: $(ARBHOME)/INCLUDE/ad_prot.h 154 173 EXP_main.o: $(ARBHOME)/INCLUDE/awt_input_mask.hxx … … 158 177 EXP_main.o: $(ARBHOME)/INCLUDE/arbdbt.h 159 178 EXP_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 160 EXP_main.o: $(ARBHOME)/INCLUDE/ntree.hxx EXP.hxx 161 EXP_main.o: EXP_local.hxx EXP_interface.hxx 179 EXP_main.o: $(ARBHOME)/INCLUDE/ntree.hxx EXP.hxx EXP_local.hxx 180 EXP_main.o: EXP_interface.hxx 181 162 182 EXP_db.o: $(ARBHOME)/INCLUDE/arbdb.h 163 183 EXP_db.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/HELP_SOURCE/Makefile
r1452 r1617 1 1 2 .SUFFIXES: .o .c .cxx .source .hlp .xml .html 2 .SUFFIXES: .o .c .cxx .source .hlp .xml .html .depend 3 3 4 4 # -------------------------------------------------------------------------------- … … 16 16 17 17 # choose conversion mode: 18 CONVERT_FROM_OLD_HELP=1# WARNING! If set to 1 => overwrites XML-Files (that 'sintended for now!)18 CONVERT_FROM_OLD_HELP=1# WARNING! If set to 1 => overwrites XML-Files (that IS intended for now!) 19 19 # if set to 0 the helpfiles in oldhelp are ignored and only XML is used as source (not intended for now) 20 20 … … 212 212 $(CPP) $(cflags) -o $@ $< $(CPPINCLUDES) $(LIB2) 213 213 214 depend: 215 $(MAKEDEPEND) -o '' -p $(ARBHOME)/bin/ $(MAKEDEPENDINC) $(OBJECT:.o=.c*) 214 DEPENDS = $(TOOL_OBJECT:.o=.depend) 215 depends: $(DEPENDS) 216 @cat $(DEPENDS) | grep -v '^#' >>Makefile 217 @rm $(DEPENDS) 218 $(DEPENDS): depend.init 219 depend.init: 220 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 221 .c.depend: 222 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 223 .cxx.depend: 224 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 216 225 217 226 # DO NOT DELETE 227 228 arb_help2xml.o: $(ARBHOME)/INCLUDE/arb_assert.h 229 arb_help2xml.o: $(ARBHOME)/INCLUDE/xml.hxx -
trunk/ISLAND_HOPPING/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cpp 2 .SUFFIXES: .o .c .cpp .depend 3 3 4 4 CPP_OBJECTS = island_hopping.o i-hopper.o align.o memory.o trnsprob.o … … 10 10 .cpp.o: 11 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 depend: 13 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cpp) $(CPP_OBJECTS:.o=.c) 12 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cpp.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 14 25 # DO NOT DELETE 15 26 16 island_hopping.o: island_hopping.h 17 island_hopping.o: i-hopper.h defs.h memory.h 27 island_hopping.o: island_hopping.h i-hopper.h defs.h memory.h 18 28 island_hopping.o: $(ARBHOME)/INCLUDE/arb_assert.h 19 i-hopper.o: 20 i-hopper.o: 21 i-hopper.o: 22 i-hopper.o: 23 i-hopper.o: 24 i-hopper.o: 25 i-hopper.o: 26 i-hopper.o: 27 i-hopper.o: memory.h 28 i-hopper.o: i-hopper.h defs.h 29 align.o: memory.h 30 align.o: trnsprob.h i-hopper.h defs.h 31 trnsprob.o: defs.h memory.h trnsprob.h 29 30 i-hopper.o: memory.h i-hopper.h defs.h 31 32 align.o: memory.h trnsprob.h i-hopper.h defs.h 33 34 trnsprob.o: defs.h memory.h trnsprob.h -
trunk/MERGE/Makefile
r1571 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 CPP_OBJECTS = MG_checkfield.o MG_main.o MG_trees.o MG_alignment.o \ 4 4 MG_species.o MG_extendeds.o MG_names.o MG_gene_species.o \ … … 7 7 $(MAIN): $(CPP_OBJECTS) 8 8 $(AR) $(MAIN) $(CPP_OBJECTS) 9 9 10 .cxx.o: 10 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 11 13 NT_cb.hxx: NT_cb.cxx NT_extern.cxx 12 14 rm -f $@ 13 15 ../MAKEBIN/aisc_mkpt -C NT_cb.cxx NT_extern.cxx >$@ 14 depend: 15 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 16 17 DEPENDS = $(CPP_OBJECTS:.o=.depend) 18 depends: $(DEPENDS) 19 @cat $(DEPENDS) | grep -v '^#' >>Makefile 20 @rm $(DEPENDS) 21 $(DEPENDS): depend.init 22 depend.init: 23 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 24 .c.depend: 25 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 26 .cxx.depend: 27 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 28 16 29 # DO NOT DELETE THIS LINE -- make depend depends on it. 17 30 18 MG_checkfield.o: 31 MG_checkfield.o: $(ARBHOME)/INCLUDE/arbdb.h 19 32 MG_checkfield.o: $(ARBHOME)/INCLUDE/arb_assert.h 20 33 MG_checkfield.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 26 39 MG_checkfield.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 27 40 MG_checkfield.o: $(ARBHOME)/INCLUDE/awt.hxx merge.hxx 41 28 42 MG_main.o: $(ARBHOME)/INCLUDE/arbdb.h 29 43 MG_main.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 38 52 MG_main.o: $(ARBHOME)/INCLUDE/awt.hxx 39 53 MG_main.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx merge.hxx mg_merge.hxx 40 MG_trees.o: $(ARBHOME)/INCLUDE/arbdb.h 54 55 MG_trees.o: $(ARBHOME)/INCLUDE/arbdb.h 41 56 MG_trees.o: $(ARBHOME)/INCLUDE/arb_assert.h 42 57 MG_trees.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 47 62 MG_trees.o: $(ARBHOME)/INCLUDE/aw_window.hxx 48 63 MG_trees.o: $(ARBHOME)/INCLUDE/awt.hxx merge.hxx 49 MG_alignment.o: $(ARBHOME)/INCLUDE/arbdb.h 64 65 MG_alignment.o: $(ARBHOME)/INCLUDE/arbdb.h 50 66 MG_alignment.o: $(ARBHOME)/INCLUDE/arb_assert.h 51 67 MG_alignment.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 56 72 MG_alignment.o: $(ARBHOME)/INCLUDE/aw_window.hxx 57 73 MG_alignment.o: $(ARBHOME)/INCLUDE/awt.hxx merge.hxx 74 58 75 MG_species.o: $(ARBHOME)/INCLUDE/arbdb.h 59 76 MG_species.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 66 83 MG_species.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 67 84 MG_species.o: $(ARBHOME)/INCLUDE/awt.hxx merge.hxx 68 MG_extendeds.o: $(ARBHOME)/INCLUDE/arbdb.h 85 86 MG_extendeds.o: $(ARBHOME)/INCLUDE/arbdb.h 69 87 MG_extendeds.o: $(ARBHOME)/INCLUDE/arb_assert.h 70 88 MG_extendeds.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 76 94 MG_extendeds.o: $(ARBHOME)/INCLUDE/awt.hxx 77 95 MG_extendeds.o: $(ARBHOME)/INCLUDE/aw_awars.hxx merge.hxx 78 MG_names.o: $(ARBHOME)/INCLUDE/arbdb.h 96 97 MG_names.o: $(ARBHOME)/INCLUDE/arbdb.h 79 98 MG_names.o: $(ARBHOME)/INCLUDE/arb_assert.h 80 99 MG_names.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 83 102 MG_names.o: $(ARBHOME)/INCLUDE/aw_window.hxx 84 103 MG_names.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx merge.hxx 104 85 105 MG_gene_species.o: $(ARBHOME)/INCLUDE/aw_window.hxx 106 MG_gene_species.o: $(ARBHOME)/INCLUDE/aw_root.hxx 107 MG_gene_species.o: $(ARBHOME)/INCLUDE/arb_assert.h 108 MG_gene_species.o: $(ARBHOME)/INCLUDE/aw_device.hxx 86 109 MG_gene_species.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 87 110 MG_gene_species.o: $(ARBHOME)/INCLUDE/awt.hxx 111 MG_gene_species.o: $(ARBHOME)/INCLUDE/arbdb.h 112 MG_gene_species.o: $(ARBHOME)/INCLUDE/ad_prot.h 88 113 MG_gene_species.o: $(ARBHOME)/INCLUDE/awt_config_manager.hxx 89 MG_gene_species.o: $(ARBHOME)/INCLUDE/arbdb.h90 MG_gene_species.o: $(ARBHOME)/INCLUDE/arb_assert.h91 MG_gene_species.o: $(ARBHOME)/INCLUDE/ad_prot.h92 114 MG_gene_species.o: $(ARBHOME)/INCLUDE/arbdbt.h 93 115 MG_gene_species.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 94 116 MG_gene_species.o: $(ARBHOME)/INCLUDE/adGene.h 95 117 MG_gene_species.o: $(ARBHOME)/INCLUDE/inline.h merge.hxx 96 MG_configs.o: $(ARBHOME)/INCLUDE/arbdb.h 118 119 MG_configs.o: $(ARBHOME)/INCLUDE/arbdb.h 97 120 MG_configs.o: $(ARBHOME)/INCLUDE/arb_assert.h 98 121 MG_configs.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 103 126 MG_configs.o: $(ARBHOME)/INCLUDE/aw_window.hxx 104 127 MG_configs.o: $(ARBHOME)/INCLUDE/awt.hxx merge.hxx 128 105 129 MG_preserves.o: $(ARBHOME)/INCLUDE/arbdb.h 106 130 MG_preserves.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 113 137 MG_preserves.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 114 138 MG_preserves.o: $(ARBHOME)/INCLUDE/awt.hxx merge.hxx 139 MG_preserves.o: $(ARBHOME)/INCLUDE/smartptr.h -
trunk/MULTI_PROBE/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 … … 12 12 $(AR) $(MAIN) $(CPP_OBJECTS) 13 13 14 .cxx.o: 14 .cxx.o: 15 15 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 16 16 … … 29 29 # clean 30 30 31 depend: 32 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 31 DEPENDS = $(CPP_OBJECTS:.o=.depend) 32 depends: $(DEPENDS) 33 @cat $(DEPENDS) | grep -v '^#' >>Makefile 34 @rm $(DEPENDS) 35 $(DEPENDS): depend.init 36 depend.init: 37 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 38 .c.depend: 39 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 40 .cxx.depend: 41 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 42 33 43 # DO NOT DELETE THIS LINE -- make depend depends on it. 34 44 35 MP_main.o: MultiProbe.hxx ./mpdefs.h 45 MP_main.o: $(ARBHOME)/INCLUDE/aw_root.hxx 46 MP_main.o: $(ARBHOME)/INCLUDE/arb_assert.h 47 MP_main.o: $(ARBHOME)/INCLUDE/aw_window.hxx 48 MP_main.o: $(ARBHOME)/INCLUDE/aw_device.hxx MultiProbe.hxx mpdefs.h 36 49 MP_main.o: $(ARBHOME)/INCLUDE/arbdb.h 37 MP_main.o: $(ARBHOME)/INCLUDE/arb_assert.h38 50 MP_main.o: $(ARBHOME)/INCLUDE/ad_prot.h 39 51 MP_main.o: $(ARBHOME)/INCLUDE/PT_com.h 40 52 MP_main.o: $(ARBHOME)/INCLUDE/client.h 41 MP_main.o: $(ARBHOME)/INCLUDE/servercntrl.h 42 MP_main.o: ./MP_externs.hxx ./SoTl.hxx 43 MP_main.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ./MP_probe.hxx 44 MP_main.o: $(ARBHOME)/INCLUDE/aw_root.hxx 45 MP_main.o: $(ARBHOME)/INCLUDE/aw_window.hxx 46 MP_main.o: $(ARBHOME)/INCLUDE/aw_device.hxx 47 MP_Window.o: MultiProbe.hxx ./mpdefs.h 53 MP_main.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 54 MP_main.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx MP_probe.hxx 55 MP_main.o: mp_proto.hxx 56 57 MP_Window.o: $(ARBHOME)/INCLUDE/aw_root.hxx 58 MP_Window.o: $(ARBHOME)/INCLUDE/arb_assert.h 59 MP_Window.o: $(ARBHOME)/INCLUDE/aw_window.hxx 60 MP_Window.o: $(ARBHOME)/INCLUDE/aw_device.hxx 61 MP_Window.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 62 MP_Window.o: $(ARBHOME)/INCLUDE/awt.hxx 48 63 MP_Window.o: $(ARBHOME)/INCLUDE/arbdb.h 49 MP_Window.o: $(ARBHOME)/INCLUDE/arb_assert.h 50 MP_Window.o: $(ARBHOME)/INCLUDE/ad_prot.h 64 MP_Window.o: $(ARBHOME)/INCLUDE/ad_prot.h MultiProbe.hxx mpdefs.h 51 65 MP_Window.o: $(ARBHOME)/INCLUDE/PT_com.h 52 66 MP_Window.o: $(ARBHOME)/INCLUDE/client.h 53 MP_Window.o: $(ARBHOME)/INCLUDE/servercntrl.h 54 MP_Window.o: ./MP_externs.hxx ./SoTl.hxx 55 MP_Window.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ./MP_probe.hxx 56 MP_Window.o: $(ARBHOME)/INCLUDE/aw_root.hxx 57 MP_Window.o: $(ARBHOME)/INCLUDE/aw_window.hxx 58 MP_Window.o: $(ARBHOME)/INCLUDE/aw_device.hxx 59 MP_Window.o: $(ARBHOME)/INCLUDE/awt.hxx 60 MP_noclass.o: MultiProbe.hxx ./mpdefs.h 67 MP_Window.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 68 MP_Window.o: SoTl.hxx MP_probe.hxx mp_proto.hxx 69 61 70 MP_noclass.o: $(ARBHOME)/INCLUDE/arbdb.h 62 71 MP_noclass.o: $(ARBHOME)/INCLUDE/arb_assert.h 63 72 MP_noclass.o: $(ARBHOME)/INCLUDE/ad_prot.h 64 MP_noclass.o: $(ARBHOME)/INCLUDE/PT_com.h65 MP_noclass.o: $(ARBHOME)/INCLUDE/client.h66 MP_noclass.o: $(ARBHOME)/INCLUDE/servercntrl.h67 MP_noclass.o: ./MP_externs.hxx ./SoTl.hxx68 MP_noclass.o: $(ARBHOME)/INCLUDE/aw_awars.hxx69 MP_noclass.o: ./MP_probe.hxx70 73 MP_noclass.o: $(ARBHOME)/INCLUDE/arbdbt.h 71 74 MP_noclass.o: $(ARBHOME)/INCLUDE/ad_t_prot.h … … 79 82 MP_noclass.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 80 83 MP_noclass.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 81 MP_noclass.o: $(ARBHOME)/INCLUDE/awt_tree_cb.hxx 82 MP_sonde.o: MultiProbe.hxx ./mpdefs.h 83 MP_sonde.o: $(ARBHOME)/INCLUDE/arbdb.h 84 MP_noclass.o: $(ARBHOME)/INCLUDE/awt_tree_cb.hxx MultiProbe.hxx 85 MP_noclass.o: mpdefs.h $(ARBHOME)/INCLUDE/PT_com.h 86 MP_noclass.o: $(ARBHOME)/INCLUDE/client.h 87 MP_noclass.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 88 MP_noclass.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 89 MP_noclass.o: MP_probe.hxx mp_proto.hxx 90 91 MP_sonde.o: MultiProbe.hxx mpdefs.h $(ARBHOME)/INCLUDE/arbdb.h 84 92 MP_sonde.o: $(ARBHOME)/INCLUDE/arb_assert.h 85 93 MP_sonde.o: $(ARBHOME)/INCLUDE/ad_prot.h 86 94 MP_sonde.o: $(ARBHOME)/INCLUDE/PT_com.h 87 95 MP_sonde.o: $(ARBHOME)/INCLUDE/client.h 88 MP_sonde.o: $(ARBHOME)/INCLUDE/servercntrl.h 89 MP_sonde.o: ./MP_externs.hxx ./SoTl.hxx 90 MP_sonde.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ./MP_probe.hxx 96 MP_sonde.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 97 MP_sonde.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx MP_probe.hxx 91 98 MP_sonde.o: $(ARBHOME)/INCLUDE/arbdbt.h 92 99 MP_sonde.o: $(ARBHOME)/INCLUDE/ad_t_prot.h … … 95 102 MP_sonde.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 96 103 MP_sonde.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 97 MP_sondentopf.o: MultiProbe.hxx ./mpdefs.h 104 105 MP_sondentopf.o: MultiProbe.hxx mpdefs.h 98 106 MP_sondentopf.o: $(ARBHOME)/INCLUDE/arbdb.h 99 107 MP_sondentopf.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 101 109 MP_sondentopf.o: $(ARBHOME)/INCLUDE/PT_com.h 102 110 MP_sondentopf.o: $(ARBHOME)/INCLUDE/client.h 103 MP_sondentopf.o: $(ARBHOME)/INCLUDE/servercntrl.h 104 MP_sondentopf.o: ./MP_externs.hxx ./SoTl.hxx 105 MP_sondentopf.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 106 MP_sondentopf.o: ./MP_probe.hxx 107 MP_sondentopf.o: $(ARBHOME)/INCLUDE/arbdbt.h 111 MP_sondentopf.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 112 MP_sondentopf.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 113 MP_sondentopf.o: MP_probe.hxx $(ARBHOME)/INCLUDE/arbdbt.h 108 114 MP_sondentopf.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 109 115 MP_sondentopf.o: $(ARBHOME)/INCLUDE/awt_tree.hxx … … 111 117 MP_sondentopf.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 112 118 MP_sondentopf.o: $(ARBHOME)/INCLUDE/aw_root.hxx 113 MP_mo_liste.o: MultiProbe.hxx ./mpdefs.h 114 MP_mo_liste.o: $(ARBHOME)/INCLUDE/arbdb.h119 120 MP_mo_liste.o: MultiProbe.hxx mpdefs.h $(ARBHOME)/INCLUDE/arbdb.h 115 121 MP_mo_liste.o: $(ARBHOME)/INCLUDE/arb_assert.h 116 122 MP_mo_liste.o: $(ARBHOME)/INCLUDE/ad_prot.h 117 123 MP_mo_liste.o: $(ARBHOME)/INCLUDE/PT_com.h 118 124 MP_mo_liste.o: $(ARBHOME)/INCLUDE/client.h 119 MP_mo_liste.o: $(ARBHOME)/INCLUDE/servercntrl.h 120 MP_mo_liste.o: ./MP_externs.hxx ./SoTl.hxx 121 MP_mo_liste.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 122 MP_mo_liste.o: ./MP_probe.hxx 123 MP_mo_liste.o: $(ARBHOME)/INCLUDE/arbdbt.h 125 MP_mo_liste.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 126 MP_mo_liste.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 127 MP_mo_liste.o: MP_probe.hxx $(ARBHOME)/INCLUDE/arbdbt.h 124 128 MP_mo_liste.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 125 129 MP_mo_liste.o: $(ARBHOME)/INCLUDE/aw_root.hxx 126 MP_probe.o: ./MP_probe.hxx MultiProbe.hxx ./mpdefs.h 130 131 MP_probe.o: MP_probe.hxx MultiProbe.hxx mpdefs.h 127 132 MP_probe.o: $(ARBHOME)/INCLUDE/arbdb.h 128 133 MP_probe.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 130 135 MP_probe.o: $(ARBHOME)/INCLUDE/PT_com.h 131 136 MP_probe.o: $(ARBHOME)/INCLUDE/client.h 132 MP_probe.o: $(ARBHOME)/INCLUDE/servercntrl.h 133 MP_probe.o: ./MP_externs.hxx ./SoTl.hxx 134 MP_probe.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 137 MP_probe.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 138 MP_probe.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 135 139 MP_probe.o: $(ARBHOME)/INCLUDE/aw_root.hxx 136 140 MP_probe.o: $(ARBHOME)/INCLUDE/aw_window.hxx 137 141 MP_probe.o: $(ARBHOME)/INCLUDE/aw_device.hxx 138 MP_GenerationDuplicates.o: MultiProbe.hxx ./mpdefs.h 142 143 MP_GenerationDuplicates.o: MultiProbe.hxx mpdefs.h 139 144 MP_GenerationDuplicates.o: $(ARBHOME)/INCLUDE/arbdb.h 140 145 MP_GenerationDuplicates.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 143 148 MP_GenerationDuplicates.o: $(ARBHOME)/INCLUDE/client.h 144 149 MP_GenerationDuplicates.o: $(ARBHOME)/INCLUDE/servercntrl.h 145 MP_GenerationDuplicates.o: ./MP_externs.hxx ./SoTl.hxx150 MP_GenerationDuplicates.o: MP_externs.hxx SoTl.hxx 146 151 MP_GenerationDuplicates.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 147 MP_GenerationDuplicates.o: ./MP_probe.hxx 148 MP_Generation.o: MultiProbe.hxx ./mpdefs.h 152 MP_GenerationDuplicates.o: MP_probe.hxx 153 154 MP_Generation.o: MultiProbe.hxx mpdefs.h 149 155 MP_Generation.o: $(ARBHOME)/INCLUDE/arbdb.h 150 156 MP_Generation.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 152 158 MP_Generation.o: $(ARBHOME)/INCLUDE/PT_com.h 153 159 MP_Generation.o: $(ARBHOME)/INCLUDE/client.h 154 MP_Generation.o: $(ARBHOME)/INCLUDE/servercntrl.h 155 MP_Generation.o: ./MP_externs.hxx ./SoTl.hxx156 MP_Generation.o: $(ARBHOME)/INCLUDE/aw_awars.hxx157 MP_Generation.o: ./MP_probe.hxx 158 MP_probe_combi_statistic.o: MultiProbe.hxx ./mpdefs.h160 MP_Generation.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 161 MP_Generation.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 162 MP_Generation.o: MP_probe.hxx 163 164 MP_probe_combi_statistic.o: MultiProbe.hxx mpdefs.h 159 165 MP_probe_combi_statistic.o: $(ARBHOME)/INCLUDE/arbdb.h 160 166 MP_probe_combi_statistic.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 163 169 MP_probe_combi_statistic.o: $(ARBHOME)/INCLUDE/client.h 164 170 MP_probe_combi_statistic.o: $(ARBHOME)/INCLUDE/servercntrl.h 165 MP_probe_combi_statistic.o: ./MP_externs.hxx ./SoTl.hxx171 MP_probe_combi_statistic.o: MP_externs.hxx SoTl.hxx 166 172 MP_probe_combi_statistic.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 167 MP_probe_combi_statistic.o: ./MP_probe.hxx 168 MP_probe_tabs.o: MultiProbe.hxx ./mpdefs.h 173 MP_probe_combi_statistic.o: MP_probe.hxx 174 175 MP_probe_tabs.o: MultiProbe.hxx mpdefs.h 169 176 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/arbdb.h 170 177 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 172 179 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/PT_com.h 173 180 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/client.h 174 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/servercntrl.h 175 MP_probe_tabs.o: ./MP_externs.hxx ./SoTl.hxx 176 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 177 MP_probe_tabs.o: ./MP_probe.hxx 178 MP_permute.o: MultiProbe.hxx ./mpdefs.h 179 MP_permute.o: $(ARBHOME)/INCLUDE/arbdb.h 181 MP_probe_tabs.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 182 MP_probe_tabs.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 183 MP_probe_tabs.o: MP_probe.hxx 184 185 MP_permute.o: MultiProbe.hxx mpdefs.h $(ARBHOME)/INCLUDE/arbdb.h 180 186 MP_permute.o: $(ARBHOME)/INCLUDE/arb_assert.h 181 187 MP_permute.o: $(ARBHOME)/INCLUDE/ad_prot.h 182 188 MP_permute.o: $(ARBHOME)/INCLUDE/PT_com.h 183 189 MP_permute.o: $(ARBHOME)/INCLUDE/client.h 184 MP_permute.o: $(ARBHOME)/INCLUDE/servercntrl.h 185 MP_permute.o: ./MP_externs.hxx ./SoTl.hxx 186 MP_permute.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 187 MP_permute.o: ./MP_probe.hxx 190 MP_permute.o: $(ARBHOME)/INCLUDE/servercntrl.h MP_externs.hxx 191 MP_permute.o: SoTl.hxx $(ARBHOME)/INCLUDE/aw_awars.hxx 192 MP_permute.o: MP_probe.hxx -
trunk/Makefile
r1534 r1617 87 87 ARLIB = ld -r -o# # The same for shared libs. 88 88 XAR = $(AR)# # Linker for archives containing templates 89 MAKEDEPEND = $(FORCEMASK);makedepend $(dflags)89 MAKEDEPEND = $(FORCEMASK);makedepend 90 90 SHARED_LIB_SUFFIX = so# # shared lib suffix 91 91 F77 = f77 … … 349 349 @echo 'Development targets:' 350 350 @echo '' 351 @echo ' depend - create dependencies (recommended for people not using our CVS)' 352 @echo ' XXX/.depend - create dependencies for dir XXX (recommended for ARB developers)' 353 @echo ' tags - create tags for xemacs' 354 @echo ' rmbak - remove all "*%" and cores' 355 @echo ' show - show available shortcuts (aka subtargets)' 351 @echo ' depends - create or update dependencies' 352 @echo ' tags - create tags for xemacs' 353 @echo ' rmbak - remove all "*%" and cores' 354 @echo ' show - show available shortcuts (AKA subtargets)' 356 355 @echo '' 357 356 @echo 'Internal maintainance:' 358 357 @echo '' 359 @echo ' tarfile - make rebuild and create "arb.tar.gz" (tarfile_ignoreto skip rebuild)'360 @echo ' tarale - compress emacs and ale lisp files int arb_ale.tar.gz'358 @echo ' tarfile - make rebuild and create arb version tarfile ("tarfile_ignore" to skip rebuild)' 359 # @echo ' tarale - compress emacs and ale lisp files int arb_ale.tar.gz' 361 360 @echo ' save - save all basic ARB sources into arbsrc_DATE (BROKEN!)' 362 @echo ' savedepot - save all extended ARB source (DEPOT2 subdir) into arbdepot_DATE.cpio.gz'361 # @echo ' savedepot - save all extended ARB source (DEPOT2 subdir) into arbdepot_DATE.cpio.gz' 363 362 @echo ' rtc_patch - create LIBLINK/libRTC8M.so (SOLARIS ONLY)' 364 363 @echo ' doc - create doxygen documentation' … … 477 476 AINCLUDES = -I. -I$(DIR)/INCLUDE $(XINCLUDES) 478 477 CPPINCLUDES = -I. -I$(DIR)/INCLUDE $(XINCLUDES) 479 MAKEDEPEND INC = -I. -I$(DIR)/DUMMYINC -I$(DIR)/INCLUDE478 MAKEDEPENDFLAGS = -- $(cflags) -I. -Y$(DIR)/INCLUDE -- 480 479 481 480 #***** List of all Directories … … 650 649 TREEGEN/TREEGEN.a \ 651 650 652 $(TREEGEN) : $(ARCHS_TREEGEN:.a=.dummy) shared_libs651 $(TREEGEN) : $(ARCHS_TREEGEN:.a=.dummy) 653 652 @echo $(SEP) Link $@ 654 653 $(CPP) $(lflags) -o $@ $(LIBPATH) $(ARCHS_TREEGEN) … … 838 837 $(CPP) $(lflags) -o $@ $(LIBPATH) ARBDB_COMPRESS/ARBDB_COMPRESS.a -lARBDB 839 838 839 #*********************************** OTHER EXECUTABLES ******************************************** 840 841 840 842 #*********************************** SHARED LIBRARIES SECTION ************************************** 841 843 … … 879 881 # Rekursiv calls to submakefiles 880 882 #*************************************************************************************** 881 : 882 %.depend: 883 @$(GMAKE) -C $(@D) -r \ 883 884 %.depends: 885 @cp -p $(@D)/Makefile $(@D)/Makefile.old # save old Makefile 886 @$(MAKE) -C $(@D) -r \ 884 887 "LD_LIBRARY_PATH = ${LD_LIBRARY_PATH}" \ 885 "MAKEDEPEND INC = $(MAKEDEPENDINC)" \888 "MAKEDEPENDFLAGS = $(MAKEDEPENDFLAGS)" \ 886 889 "MAKEDEPEND=$(MAKEDEPEND)" \ 887 890 "ARBHOME=$(ARBHOME)" \ 888 depend ;889 @ (grep "^# DO NOT DELETE" $(@D)/Makefile >/dev/null && cat $(@D)/Makefile \890 | sed -e "s/\/[^ ]*\/DUMMYINC\/[^ ]*\.h//g"\891 -e "s/\/usr\/[^ ]*\.h//g"\891 depends; 892 @grep "^# DO NOT DELETE" $(@D)/Makefile >/dev/null 893 @cat $(@D)/Makefile \ 894 | sed \ 892 895 -e "s&$(ARBHOME)&\\\$$(ARBHOME)&g" \ 893 -e '/^[A-Za-z][A-Za-z0-9_]*\.o:[ ]*$$/d' \ 894 >$(@D)/Makefile.2 && \ 895 mv $(@D)/Makefile.2 $(@D)/Makefile) || echo nop 896 897 # 898 # -e "s/^[A-Za-z0-9_]+\.o: *$/\#deleted/g" \ 899 # -e "s/\/[^ ]*\/INCLUDE/\\\$$(ARBHOME)\/INCLUDE/g" 900 896 -e "s/[ /t]\.\// /g" \ 897 >$(@D)/Makefile.2 898 @mv $(@D)/Makefile.old $(@D)/Makefile # restore old Makefile 899 @$(ARBHOME)/SOURCE_TOOLS/mv_if_diff $(@D)/Makefile.2 $(@D)/Makefile # update Makefile if changed 901 900 902 901 %.dummy: … … 1032 1031 #******************************************************************************** 1033 1032 1034 depend: $(ARCHS:.a=.depend) 1033 depends: $(ARCHS:.a=.depends) \ 1034 HELP_SOURCE/HELP_SOURCE.depends \ 1035 1035 1036 1036 #******************************************************************************** … … 1144 1144 LD_LIBRARY_PATH=${ARBHOME}/LIBLINK;export LD_LIBRARY_PATH;echo LD_LIBRARY_PATH=$$LD_LIBRARY_PATH;echo calling bin/arb_proto_2_xsub ...;bin/arb_proto_2_xsub PERL2ARB/proto.h PERL2ARB/ARB.xs.default >PERL2ARB/ARB.xs 1145 1145 PATH=/usr/arb/bin:${PATH};export PATH;cd PERL2ARB;echo calling perl ${MACH}.PL;perl -I ../lib/perl5 ${MACH}.PL;echo -------- calling MakeMaker makefile;make 1146 # PATH=/usr/arb/bin:${PATH};export PATH;cd PERL2ARB;echo calling perl ${MACH}.PL;perl ${MACH}.PL;echo calling make;make1147 1146 echo -------- end of MakeMaker-Makefile 1148 1147 cp PERL2ARB/blib/arch/auto/ARB/ARB.so lib … … 1200 1199 util/arb_save_depot 1201 1200 1202 # DO NOT DELETE -
trunk/NALIGNER/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .c .cxx 3 .SUFFIXES: .o .c .cxx .depend 4 4 5 5 #CFLAGS = -g … … 18 18 19 19 20 $(MAIN): $(CPP_OBJECTS) 20 $(MAIN): $(CPP_OBJECTS) 21 21 $(CPP) -o $(MAIN:.a=.com) $(CPP_OBJECTS) $(CPPINCLUDES) $(LIBPATH) ../PROBE_COM/client.a ../SERVERCNTRL/SERVERCNTRL.a -lARBDB $(SYSLIBS) $(CCPLIBS) 22 22 touch $(MAIN); 23 23 24 .cxx.o: 24 .cxx.o: 25 25 $(CPP) $(CFLAGS) -c -o $@ $< $(CPPINCLUDES) 26 26 27 depend: 28 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 27 DEPENDS = $(CPP_OBJECTS:.o=.depend) 28 depends: $(DEPENDS) 29 @cat $(DEPENDS) | grep -v '^#' >>Makefile 30 @rm $(DEPENDS) 31 $(DEPENDS): depend.init 32 depend.init: 33 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 34 .c.depend: 35 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 36 .cxx.depend: 37 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 29 38 30 39 # DO NOT DELETE THIS LINE -- make depend depends on it. 31 40 32 41 ali_prealigner.o: ali_prealigner.hxx ali_profile.hxx ali_sequence.hxx 33 ali_prealigner.o: ali_misc.hxx 34 ali_prealigner.o: ali_arbdb.hxx ali_other_stuff.hxx 42 ali_prealigner.o: ali_misc.hxx ali_arbdb.hxx ali_other_stuff.hxx 35 43 ali_prealigner.o: $(ARBHOME)/INCLUDE/PT_com.h 36 44 ali_prealigner.o: $(ARBHOME)/INCLUDE/server.h … … 41 49 ali_prealigner.o: $(ARBHOME)/INCLUDE/arbdbt.h 42 50 ali_prealigner.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 43 ali_prealigner.o: $(ARBHOME)/INCLUDE/servercntrl.h 44 ali_prealigner.o: ali_pt.hxx ali_tlist.hxx 45 ali_prealigner.o: $(ARBHOME)/INCLUDE/client.h 51 ali_prealigner.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_pt.hxx 52 ali_prealigner.o: ali_tlist.hxx $(ARBHOME)/INCLUDE/client.h 46 53 ali_prealigner.o: ali_pathmap.hxx ali_tarray.hxx ali_tstack.hxx 47 54 ali_prealigner.o: ali_solution.hxx ali_aligner.hxx 55 48 56 ali_aligner.o: ali_aligner.hxx ali_solution.hxx ali_profile.hxx 49 ali_aligner.o: ali_sequence.hxx ali_misc.hxx 50 ali_aligner.o: ali_arbdb.hxx ali_other_stuff.hxx 51 ali_aligner.o: $(ARBHOME)/INCLUDE/PT_com.h 57 ali_aligner.o: ali_sequence.hxx ali_misc.hxx ali_arbdb.hxx 58 ali_aligner.o: ali_other_stuff.hxx $(ARBHOME)/INCLUDE/PT_com.h 52 59 ali_aligner.o: $(ARBHOME)/INCLUDE/server.h 53 60 ali_aligner.o: $(ARBHOME)/INCLUDE/aisc_func_types.h … … 60 67 ali_aligner.o: ali_tlist.hxx $(ARBHOME)/INCLUDE/client.h 61 68 ali_aligner.o: ali_tstack.hxx ali_tarray.hxx ali_pathmap.hxx 62 ali_arbdb.o: ali_arbdb.hxx 63 ali_arbdb.o: ali_ other_stuff.hxx69 70 ali_arbdb.o: ali_arbdb.hxx ali_other_stuff.hxx 64 71 ali_arbdb.o: $(ARBHOME)/INCLUDE/PT_com.h 65 72 ali_arbdb.o: $(ARBHOME)/INCLUDE/server.h … … 70 77 ali_arbdb.o: $(ARBHOME)/INCLUDE/arbdbt.h 71 78 ali_arbdb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 72 ali_arbdb.o: $(ARBHOME)/INCLUDE/servercntrl.h 73 ali_arbdb.o: ali_sequence.hxx ali_misc.hxx 74 ali_sequence.o: ali_misc.hxx 75 ali_sequence.o: ali_sequence.hxx 76 ali_solution.o: ali_misc.hxx 77 ali_solution.o: ali_solution.hxx ali_profile.hxx 78 ali_solution.o: ali_sequence.hxx ali_arbdb.hxx 79 ali_solution.o: ali_other_stuff.hxx 79 ali_arbdb.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_sequence.hxx 80 ali_arbdb.o: ali_misc.hxx 81 82 ali_sequence.o: ali_misc.hxx ali_sequence.hxx 83 84 ali_solution.o: ali_misc.hxx ali_solution.hxx ali_profile.hxx 85 ali_solution.o: ali_sequence.hxx ali_arbdb.hxx ali_other_stuff.hxx 80 86 ali_solution.o: $(ARBHOME)/INCLUDE/PT_com.h 81 87 ali_solution.o: $(ARBHOME)/INCLUDE/server.h … … 88 94 ali_solution.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_pt.hxx 89 95 ali_solution.o: ali_tlist.hxx $(ARBHOME)/INCLUDE/client.h 90 ali_pt.o: ali_misc.hxx ali_pt.hxx ali_other_stuff.hxx 96 97 ali_pt.o: ali_misc.hxx ali_pt.hxx ali_other_stuff.hxx 91 98 ali_pt.o: $(ARBHOME)/INCLUDE/PT_com.h 92 99 ali_pt.o: $(ARBHOME)/INCLUDE/server.h … … 99 106 ali_pt.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_tlist.hxx 100 107 ali_pt.o: ali_sequence.hxx $(ARBHOME)/INCLUDE/client.h 101 ali_global.o: ali_misc.hxx 102 ali_global.o: ali_global.hxx ali_arbdb.hxx 103 ali_global.o: ali_other_stuff.hxx 108 109 ali_global.o: ali_misc.hxx ali_global.hxx ali_arbdb.hxx ali_other_stuff.hxx 104 110 ali_global.o: $(ARBHOME)/INCLUDE/PT_com.h 105 111 ali_global.o: $(ARBHOME)/INCLUDE/server.h … … 110 116 ali_global.o: $(ARBHOME)/INCLUDE/arbdbt.h 111 117 ali_global.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 112 ali_global.o: $(ARBHOME)/INCLUDE/servercntrl.h 113 ali_global.o: ali_sequence.hxx ali_pt.hxx ali_tlist.hxx 114 ali_global.o: $(ARBHOME)/INCLUDE/client.h ali_profile.hxx 115 ali_global.o: ali_prealigner.hxx ali_pathmap.hxx ali_tarray.hxx 116 ali_global.o: ali_tstack.hxx ali_solution.hxx 117 ali_profile.o: ali_misc.hxx 118 ali_profile.o: ali_profile.hxx ali_sequence.hxx 119 ali_profile.o: ali_arbdb.hxx ali_other_stuff.hxx 120 ali_profile.o: $(ARBHOME)/INCLUDE/PT_com.h 118 ali_global.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_sequence.hxx 119 ali_global.o: ali_pt.hxx ali_tlist.hxx $(ARBHOME)/INCLUDE/client.h 120 ali_global.o: ali_profile.hxx ali_prealigner.hxx ali_pathmap.hxx 121 ali_global.o: ali_tarray.hxx ali_tstack.hxx ali_solution.hxx 122 123 ali_profile.o: ali_misc.hxx ali_profile.hxx ali_sequence.hxx ali_arbdb.hxx 124 ali_profile.o: ali_other_stuff.hxx $(ARBHOME)/INCLUDE/PT_com.h 121 125 ali_profile.o: $(ARBHOME)/INCLUDE/server.h 122 126 ali_profile.o: $(ARBHOME)/INCLUDE/aisc_func_types.h … … 128 132 ali_profile.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_pt.hxx 129 133 ali_profile.o: ali_tlist.hxx $(ARBHOME)/INCLUDE/client.h 130 ali_profile.o: ali_solution.hxx ./BI_helix.hxx 131 ali_pathmap.o: ali_pathmap.hxx ali_tarray.hxx ali_misc.hxx 132 ali_pathmap.o: ali_tlist.hxx 133 ali_main.o: ali_misc.hxx 134 ali_main.o: ali_global.hxx 135 ali_main.o: ali_arbdb.hxx ali_other_stuff.hxx 134 ali_profile.o: ali_solution.hxx BI_helix.hxx 135 136 ali_pathmap.o: ali_pathmap.hxx ali_tarray.hxx ali_misc.hxx ali_tlist.hxx 137 138 ali_main.o: ali_misc.hxx ali_global.hxx ali_arbdb.hxx ali_other_stuff.hxx 136 139 ali_main.o: $(ARBHOME)/INCLUDE/PT_com.h 137 140 ali_main.o: $(ARBHOME)/INCLUDE/server.h … … 142 145 ali_main.o: $(ARBHOME)/INCLUDE/arbdbt.h 143 146 ali_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 144 ali_main.o: $(ARBHOME)/INCLUDE/servercntrl.h 145 ali_main.o: ali_ sequence.hxx ali_pt.hxx ali_tlist.hxx146 ali_main.o: $(ARBHOME)/INCLUDE/client.h ali_profile.hxx147 ali_main.o: ali_ prealigner.hxx ali_pathmap.hxx ali_tarray.hxx ali_tstack.hxx148 ali_main.o: ali_solution.hxx ali_aligner.hxx 147 ali_main.o: $(ARBHOME)/INCLUDE/servercntrl.h ali_sequence.hxx 148 ali_main.o: ali_pt.hxx ali_tlist.hxx $(ARBHOME)/INCLUDE/client.h 149 ali_main.o: ali_profile.hxx ali_prealigner.hxx ali_pathmap.hxx ali_tarray.hxx 150 ali_main.o: ali_tstack.hxx ali_solution.hxx ali_aligner.hxx 151 149 152 BI_helix.o: $(ARBHOME)/INCLUDE/arbdb.h 150 153 BI_helix.o: $(ARBHOME)/INCLUDE/arb_assert.h 151 154 BI_helix.o: $(ARBHOME)/INCLUDE/ad_prot.h 152 155 BI_helix.o: $(ARBHOME)/INCLUDE/arbdbt.h 153 BI_helix.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ./BI_helix.hxx156 BI_helix.o: $(ARBHOME)/INCLUDE/ad_t_prot.h BI_helix.hxx -
trunk/NAMES/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx .c 3 OBJECTS = names.o 2 .SUFFIXES: .o .cxx .c .depend 3 OBJECTS = names.o 4 4 $(MAIN): $(OBJECTS) 5 5 $(AR) $(MAIN) $(OBJECTS) 6 .c.o: 6 .c.o: 7 7 $(ACC) $(cflags) -c $< $(AINCLUDES) 8 .cxx.o: 8 .cxx.o: 9 9 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 depend: 11 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx) 10 11 DEPENDS = $(OBJECTS:.o=.depend) 12 depends: $(DEPENDS) 13 @cat $(DEPENDS) | grep -v '^#' >>Makefile 14 @rm $(DEPENDS) 15 $(DEPENDS): depend.init 16 depend.init: 17 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 18 .c.depend: 19 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 20 .cxx.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 12 23 # DO NOT DELETE THIS LINE -- make depend depends on it. 13 24 -
trunk/NAMES_COM/Makefile
r1453 r1617 18 18 "CLIENTCOMPILER = $(CLIENTCOMPILER)" "AR = $(AR)" 19 19 20 depend: 21 @echo "MGR COM no automatic dependencies" 20 depends: 21 @echo "no automatic dependencies for NAMES_COM - skipped" 22 22 23 clean: 23 24 $(MAKE) $(makeflags) -f AISC/Makefile clean 25 26 # DO NOT DELETE -
trunk/NTREE/Makefile
r1465 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 … … 30 30 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 31 31 32 depend: 33 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_SOURCES) 32 DEPENDS = $(CPP_OBJECTS:.o=.depend) 33 depends: $(DEPENDS) 34 @cat $(DEPENDS) | grep -v '^#' >>Makefile 35 @rm $(DEPENDS) 36 $(DEPENDS): depend.init 37 depend.init: 38 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 39 .cxx.depend: 40 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 34 41 35 42 # DO NOT DELETE THIS LINE -- make depend depends on it. 36 43 44 NT_edconf.o: $(ARBHOME)/INCLUDE/arbdb.h 45 NT_edconf.o: $(ARBHOME)/INCLUDE/arb_assert.h 46 NT_edconf.o: $(ARBHOME)/INCLUDE/ad_prot.h 47 NT_edconf.o: $(ARBHOME)/INCLUDE/arbdbt.h 48 NT_edconf.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 49 NT_edconf.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 50 NT_edconf.o: $(ARBHOME)/INCLUDE/aw_root.hxx 51 NT_edconf.o: $(ARBHOME)/INCLUDE/aw_device.hxx 52 NT_edconf.o: $(ARBHOME)/INCLUDE/aw_window.hxx nt_edconf.hxx 53 NT_edconf.o: $(ARBHOME)/INCLUDE/awt.hxx 54 NT_edconf.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 55 NT_edconf.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 56 NT_edconf.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 57 NT_edconf.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 58 NT_edconf.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 59 60 NT_join.o: $(ARBHOME)/INCLUDE/arbdb.h 61 NT_join.o: $(ARBHOME)/INCLUDE/arb_assert.h 62 NT_join.o: $(ARBHOME)/INCLUDE/ad_prot.h 63 NT_join.o: $(ARBHOME)/INCLUDE/arbdbt.h 64 NT_join.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 65 NT_join.o: $(ARBHOME)/INCLUDE/aw_root.hxx 66 NT_join.o: $(ARBHOME)/INCLUDE/aw_device.hxx 67 NT_join.o: $(ARBHOME)/INCLUDE/aw_window.hxx 68 NT_join.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 69 NT_join.o: $(ARBHOME)/INCLUDE/awt.hxx 70 71 NT_sort.o: $(ARBHOME)/INCLUDE/arbdb.h 72 NT_sort.o: $(ARBHOME)/INCLUDE/arb_assert.h 73 NT_sort.o: $(ARBHOME)/INCLUDE/ad_prot.h 74 NT_sort.o: $(ARBHOME)/INCLUDE/arbdbt.h 75 NT_sort.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 76 NT_sort.o: $(ARBHOME)/INCLUDE/aw_root.hxx 77 NT_sort.o: $(ARBHOME)/INCLUDE/aw_device.hxx 78 NT_sort.o: $(ARBHOME)/INCLUDE/aw_window.hxx 79 NT_sort.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 80 NT_sort.o: $(ARBHOME)/INCLUDE/awt.hxx nt_sort.hxx 81 82 NT_cb.o: $(ARBHOME)/INCLUDE/arbdb.h 83 NT_cb.o: $(ARBHOME)/INCLUDE/arb_assert.h 84 NT_cb.o: $(ARBHOME)/INCLUDE/ad_prot.h 85 NT_cb.o: $(ARBHOME)/INCLUDE/arbdbt.h 86 NT_cb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 87 NT_cb.o: $(ARBHOME)/INCLUDE/aw_root.hxx 88 NT_cb.o: $(ARBHOME)/INCLUDE/aw_device.hxx 89 NT_cb.o: $(ARBHOME)/INCLUDE/aw_window.hxx 90 NT_cb.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 91 NT_cb.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 92 NT_cb.o: $(ARBHOME)/INCLUDE/awt.hxx 93 NT_cb.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 94 NT_cb.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 95 NT_cb.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 96 NT_cb.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx ad_trees.hxx ntree.hxx 97 98 NT_main.o: $(ARBHOME)/INCLUDE/arbdb.h 99 NT_main.o: $(ARBHOME)/INCLUDE/arb_assert.h 100 NT_main.o: $(ARBHOME)/INCLUDE/ad_prot.h 101 NT_main.o: $(ARBHOME)/INCLUDE/arbdbt.h 102 NT_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 103 NT_main.o: $(ARBHOME)/INCLUDE/servercntrl.h 104 NT_main.o: $(ARBHOME)/INCLUDE/aw_root.hxx 105 NT_main.o: $(ARBHOME)/INCLUDE/aw_device.hxx 106 NT_main.o: $(ARBHOME)/INCLUDE/aw_window.hxx 107 NT_main.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 108 NT_main.o: $(ARBHOME)/INCLUDE/aw_question.hxx 109 NT_main.o: $(ARBHOME)/INCLUDE/arbtools.h 110 NT_main.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 111 NT_main.o: $(ARBHOME)/INCLUDE/awt_advice.hxx 112 NT_main.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 113 NT_main.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 114 NT_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 115 NT_main.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 116 NT_main.o: $(ARBHOME)/INCLUDE/awt.hxx 117 NT_main.o: $(ARBHOME)/INCLUDE/awti_import.hxx ntree.hxx nt_cb.hxx 118 NT_main.o: $(ARBHOME)/INCLUDE/mg_merge.hxx 119 NT_main.o: $(ARBHOME)/INCLUDE/seer.hxx nt_concatenate.hxx 120 121 NT_extern.o: $(ARBHOME)/INCLUDE/arbdb.h 122 NT_extern.o: $(ARBHOME)/INCLUDE/arb_assert.h 123 NT_extern.o: $(ARBHOME)/INCLUDE/ad_prot.h 124 NT_extern.o: $(ARBHOME)/INCLUDE/arbdbt.h 125 NT_extern.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 126 NT_extern.o: $(ARBHOME)/INCLUDE/aw_root.hxx 127 NT_extern.o: $(ARBHOME)/INCLUDE/aw_device.hxx 128 NT_extern.o: $(ARBHOME)/INCLUDE/aw_window.hxx 129 NT_extern.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ad_trees.hxx ad_ext.hxx 130 NT_extern.o: ad_spec.hxx $(ARBHOME)/INCLUDE/awt.hxx 131 NT_extern.o: $(ARBHOME)/INCLUDE/awt_nds.hxx 132 NT_extern.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 133 NT_extern.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 134 NT_extern.o: $(ARBHOME)/INCLUDE/awt_preset.hxx 135 NT_extern.o: $(ARBHOME)/INCLUDE/awt_advice.hxx 136 NT_extern.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx 137 NT_extern.o: $(ARBHOME)/INCLUDE/awtc_submission.hxx 138 NT_extern.o: $(ARBHOME)/INCLUDE/gde.hxx 139 NT_extern.o: $(ARBHOME)/INCLUDE/awt_www.hxx 140 NT_extern.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 141 NT_extern.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 142 NT_extern.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 143 NT_extern.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 144 NT_extern.o: $(ARBHOME)/INCLUDE/awt_tree_cb.hxx ntree.hxx nt_cb.hxx 145 NT_extern.o: etc_check_gcg.hxx nt_sort.hxx ap_consensus.hxx 146 NT_extern.o: ap_csp_2_gnuplot.hxx ap_conservProfile2Gnuplot.hxx 147 NT_extern.o: $(ARBHOME)/INCLUDE/awti_export.hxx nt_join.hxx 148 NT_extern.o: nt_edconf.hxx ap_pos_var_pars.hxx ad_ali.hxx nt_import.hxx 149 NT_extern.o: nt_date.h nt_internal.h $(ARBHOME)/INCLUDE/st_window.hxx 150 NT_extern.o: $(ARBHOME)/INCLUDE/probe_design.hxx 151 NT_extern.o: $(ARBHOME)/INCLUDE/primer_design.hxx 152 NT_extern.o: $(ARBHOME)/INCLUDE/GEN.hxx 153 NT_extern.o: $(ARBHOME)/INCLUDE/adGene.h 154 NT_extern.o: $(ARBHOME)/INCLUDE/EXP.hxx 155 NT_extern.o: $(ARBHOME)/INCLUDE/awt_input_mask.hxx 156 NT_extern.o: $(ARBHOME)/INCLUDE/smartptr.h 157 NT_extern.o: $(ARBHOME)/INCLUDE/awt_hotkeys.hxx nt_concatenate.hxx 158 NT_extern.o: nt_validNames.hxx nt_validManual.hxx 159 NT_extern.o: $(ARBHOME)/INCLUDE/seq_quality.h 160 161 NT_validNames.o: $(ARBHOME)/INCLUDE/arbdb.h 162 NT_validNames.o: $(ARBHOME)/INCLUDE/arb_assert.h 163 NT_validNames.o: $(ARBHOME)/INCLUDE/ad_prot.h 164 NT_validNames.o: $(ARBHOME)/INCLUDE/arbdbt.h 165 NT_validNames.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 166 NT_validNames.o: $(ARBHOME)/INCLUDE/aw_root.hxx 167 NT_validNames.o: $(ARBHOME)/INCLUDE/aw_device.hxx 168 NT_validNames.o: $(ARBHOME)/INCLUDE/aw_window.hxx 169 NT_validNames.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 170 NT_validNames.o: $(ARBHOME)/INCLUDE/awt.hxx 171 NT_validNames.o: $(ARBHOME)/INCLUDE/awt_www.hxx nt_validNames.hxx 172 NT_validNames.o: nt_validNameParser.hxx 173 174 NT_validNameParser.o: nt_validNameParser.hxx 175 176 NT_validManual.o: $(ARBHOME)/INCLUDE/arbdb.h 177 NT_validManual.o: $(ARBHOME)/INCLUDE/arb_assert.h 178 NT_validManual.o: $(ARBHOME)/INCLUDE/ad_prot.h 179 NT_validManual.o: $(ARBHOME)/INCLUDE/arbdbt.h 180 NT_validManual.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 181 NT_validManual.o: $(ARBHOME)/INCLUDE/aw_root.hxx 182 NT_validManual.o: $(ARBHOME)/INCLUDE/aw_device.hxx 183 NT_validManual.o: $(ARBHOME)/INCLUDE/aw_window.hxx 184 NT_validManual.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 185 NT_validManual.o: $(ARBHOME)/INCLUDE/awt.hxx nt_validManual.hxx 186 187 NT_ins_col.o: $(ARBHOME)/INCLUDE/arbdb.h 188 NT_ins_col.o: $(ARBHOME)/INCLUDE/arb_assert.h 189 NT_ins_col.o: $(ARBHOME)/INCLUDE/ad_prot.h 190 NT_ins_col.o: $(ARBHOME)/INCLUDE/arbdbt.h 191 NT_ins_col.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 192 NT_ins_col.o: $(ARBHOME)/INCLUDE/aw_root.hxx 193 NT_ins_col.o: $(ARBHOME)/INCLUDE/aw_device.hxx 194 NT_ins_col.o: $(ARBHOME)/INCLUDE/aw_window.hxx 195 NT_ins_col.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 196 197 NT_import.o: $(ARBHOME)/INCLUDE/arbdb.h 198 NT_import.o: $(ARBHOME)/INCLUDE/arb_assert.h 199 NT_import.o: $(ARBHOME)/INCLUDE/ad_prot.h 200 NT_import.o: $(ARBHOME)/INCLUDE/arbdbt.h 201 NT_import.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 202 NT_import.o: $(ARBHOME)/INCLUDE/aw_root.hxx 203 NT_import.o: $(ARBHOME)/INCLUDE/aw_window.hxx 204 NT_import.o: $(ARBHOME)/INCLUDE/aw_device.hxx 205 NT_import.o: $(ARBHOME)/INCLUDE/awti_import.hxx 206 NT_import.o: $(ARBHOME)/INCLUDE/mg_merge.hxx nt_import.hxx ad_spec.hxx 207 NT_import.o: $(ARBHOME)/INCLUDE/GEN.hxx 208 NT_import.o: $(ARBHOME)/INCLUDE/adGene.h 209 210 NT_concatenate.o: $(ARBHOME)/INCLUDE/arbdb.h 211 NT_concatenate.o: $(ARBHOME)/INCLUDE/arb_assert.h 212 NT_concatenate.o: $(ARBHOME)/INCLUDE/ad_prot.h 213 NT_concatenate.o: $(ARBHOME)/INCLUDE/arbdbt.h 214 NT_concatenate.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 215 NT_concatenate.o: $(ARBHOME)/INCLUDE/aw_root.hxx 216 NT_concatenate.o: $(ARBHOME)/INCLUDE/aw_device.hxx 217 NT_concatenate.o: $(ARBHOME)/INCLUDE/aw_window.hxx 218 NT_concatenate.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 219 NT_concatenate.o: $(ARBHOME)/INCLUDE/awt.hxx 220 NT_concatenate.o: $(ARBHOME)/INCLUDE/awtc_rename.hxx 221 NT_concatenate.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 222 NT_concatenate.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 223 NT_concatenate.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 224 NT_concatenate.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 225 NT_concatenate.o: $(ARBHOME)/INCLUDE/awtlocal.hxx 226 NT_concatenate.o: $(ARBHOME)/INCLUDE/aw_question.hxx 227 NT_concatenate.o: $(ARBHOME)/INCLUDE/arbtools.h nt_concatenate.hxx 228 NT_concatenate.o: nt_sort.hxx 229 230 ad_spec.o: $(ARBHOME)/INCLUDE/arbdb.h 231 ad_spec.o: $(ARBHOME)/INCLUDE/arb_assert.h 232 ad_spec.o: $(ARBHOME)/INCLUDE/ad_prot.h 233 ad_spec.o: $(ARBHOME)/INCLUDE/arbdbt.h 234 ad_spec.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 235 ad_spec.o: $(ARBHOME)/INCLUDE/aw_root.hxx 236 ad_spec.o: $(ARBHOME)/INCLUDE/aw_device.hxx 237 ad_spec.o: $(ARBHOME)/INCLUDE/aw_window.hxx 238 ad_spec.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ad_spec.hxx 239 ad_spec.o: $(ARBHOME)/INCLUDE/awt.hxx 240 ad_spec.o: $(ARBHOME)/INCLUDE/awt_www.hxx 241 ad_spec.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 242 ad_spec.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 243 ad_spec.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 244 ad_spec.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 245 ad_spec.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 246 ad_spec.o: $(ARBHOME)/INCLUDE/awtlocal.hxx 247 ad_spec.o: $(ARBHOME)/INCLUDE/awtc_next_neighbours.hxx ntree.hxx 248 ad_spec.o: $(ARBHOME)/INCLUDE/probe_design.hxx 249 250 ad_trees.o: $(ARBHOME)/INCLUDE/arbdb.h 251 ad_trees.o: $(ARBHOME)/INCLUDE/arb_assert.h 252 ad_trees.o: $(ARBHOME)/INCLUDE/ad_prot.h 253 ad_trees.o: $(ARBHOME)/INCLUDE/arbdbt.h 254 ad_trees.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 255 ad_trees.o: $(ARBHOME)/INCLUDE/aw_root.hxx 256 ad_trees.o: $(ARBHOME)/INCLUDE/aw_device.hxx 257 ad_trees.o: $(ARBHOME)/INCLUDE/aw_window.hxx 258 ad_trees.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 259 ad_trees.o: $(ARBHOME)/INCLUDE/awt.hxx 260 ad_trees.o: $(ARBHOME)/INCLUDE/awt_imp_exp.hxx 261 ad_trees.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 262 ad_trees.o: $(ARBHOME)/INCLUDE/awt_tree_cmp.hxx 263 264 ad_ali.o: $(ARBHOME)/INCLUDE/aw_root.hxx 265 ad_ali.o: $(ARBHOME)/INCLUDE/arb_assert.h 266 ad_ali.o: $(ARBHOME)/INCLUDE/aw_device.hxx 267 ad_ali.o: $(ARBHOME)/INCLUDE/aw_window.hxx 268 ad_ali.o: $(ARBHOME)/INCLUDE/arbdb.h 269 ad_ali.o: $(ARBHOME)/INCLUDE/ad_prot.h 270 ad_ali.o: $(ARBHOME)/INCLUDE/arbdbt.h 271 ad_ali.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 272 ad_ali.o: $(ARBHOME)/INCLUDE/awt.hxx 273 274 ad_ext.o: $(ARBHOME)/INCLUDE/arbdb.h 275 ad_ext.o: $(ARBHOME)/INCLUDE/arb_assert.h 276 ad_ext.o: $(ARBHOME)/INCLUDE/ad_prot.h 277 ad_ext.o: $(ARBHOME)/INCLUDE/arbdbt.h 278 ad_ext.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 279 ad_ext.o: $(ARBHOME)/INCLUDE/aw_root.hxx 280 ad_ext.o: $(ARBHOME)/INCLUDE/aw_device.hxx 281 ad_ext.o: $(ARBHOME)/INCLUDE/aw_window.hxx 282 ad_ext.o: $(ARBHOME)/INCLUDE/awt.hxx 283 ad_ext.o: $(ARBHOME)/INCLUDE/aw_awars.hxx ad_ext.hxx 284 285 ad_transpro.o: $(ARBHOME)/INCLUDE/arbdb.h 286 ad_transpro.o: $(ARBHOME)/INCLUDE/arb_assert.h 287 ad_transpro.o: $(ARBHOME)/INCLUDE/ad_prot.h 288 ad_transpro.o: $(ARBHOME)/INCLUDE/arbdbt.h 289 ad_transpro.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 290 ad_transpro.o: $(ARBHOME)/INCLUDE/aw_root.hxx 291 ad_transpro.o: $(ARBHOME)/INCLUDE/aw_device.hxx 292 ad_transpro.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 293 ad_transpro.o: $(ARBHOME)/INCLUDE/aw_window.hxx 294 ad_transpro.o: $(ARBHOME)/INCLUDE/awt.hxx 295 ad_transpro.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 296 ad_transpro.o: $(ARBHOME)/INCLUDE/awt_codon_table.hxx 297 298 AP_consensus.o: $(ARBHOME)/INCLUDE/arbdb.h 299 AP_consensus.o: $(ARBHOME)/INCLUDE/arb_assert.h 300 AP_consensus.o: $(ARBHOME)/INCLUDE/ad_prot.h 301 AP_consensus.o: $(ARBHOME)/INCLUDE/arbdbt.h 302 AP_consensus.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 303 AP_consensus.o: $(ARBHOME)/INCLUDE/aw_root.hxx 304 AP_consensus.o: $(ARBHOME)/INCLUDE/aw_device.hxx 305 AP_consensus.o: $(ARBHOME)/INCLUDE/aw_window.hxx 306 AP_consensus.o: $(ARBHOME)/INCLUDE/awt.hxx 307 308 AP_cprofile.o: $(ARBHOME)/INCLUDE/arbdb.h 309 AP_cprofile.o: $(ARBHOME)/INCLUDE/arb_assert.h 310 AP_cprofile.o: $(ARBHOME)/INCLUDE/ad_prot.h 311 AP_cprofile.o: $(ARBHOME)/INCLUDE/arbdbt.h 312 AP_cprofile.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 313 AP_cprofile.o: $(ARBHOME)/INCLUDE/aw_root.hxx 314 AP_cprofile.o: $(ARBHOME)/INCLUDE/aw_device.hxx 315 AP_cprofile.o: $(ARBHOME)/INCLUDE/aw_window.hxx 316 AP_cprofile.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 317 AP_cprofile.o: $(ARBHOME)/INCLUDE/awt.hxx 318 319 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/arbdb.h 320 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/arb_assert.h 321 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/ad_prot.h 322 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/arbdbt.h 323 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 324 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/aw_root.hxx 325 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/aw_device.hxx 326 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/aw_window.hxx 327 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/awt.hxx 328 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 329 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 330 AP_pos_var_pars.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 331 AP_pos_var_pars.o: ap_pos_var_pars.hxx 332 333 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/arbdb.h 334 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/arb_assert.h 335 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/ad_prot.h 336 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/arbdbt.h 337 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 338 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/aw_root.hxx 339 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/aw_device.hxx 340 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/aw_window.hxx 341 ETC_check_gcg.o: $(ARBHOME)/INCLUDE/awt.hxx 342 343 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/arbdb.h 344 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/arb_assert.h 345 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/ad_prot.h 346 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/arbdbt.h 347 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 348 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/aw_root.hxx 349 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/aw_device.hxx 350 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/aw_window.hxx 351 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 352 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/awt.hxx 353 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 354 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 355 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 356 AP_csp_2_gnuplot.o: $(ARBHOME)/INCLUDE/awt_csp.hxx 357 AP_csp_2_gnuplot.o: ap_csp_2_gnuplot.hxx 358 359 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/arbdb.h 360 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/arb_assert.h 361 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/ad_prot.h 362 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/arbdbt.h 363 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 364 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/aw_root.hxx 365 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/aw_device.hxx 366 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/aw_window.hxx 367 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 368 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/awt.hxx 369 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 370 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 371 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 372 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 373 AP_conservProfile2Gnuplot.o: $(ARBHOME)/INCLUDE/awt_csp.hxx 374 AP_conservProfile2Gnuplot.o: ap_conservProfile2Gnuplot.hxx -
trunk/ORS_CGI/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 CPP_OBJECTS = ORS_C_main.o ORS_C_PT.o ORS_C_html.o ORS_C_java.o \ 4 4 ORS_C_user.o ORS_C_lib.o ORS_C_java_main.o ORS_C_scripts.o \ … … 6 6 $(MAIN): $(CPP_OBJECTS) 7 7 $(AR) $(MAIN) $(CPP_OBJECTS) 8 .cxx.o: 8 .cxx.o: 9 9 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 10 … … 12 12 rm -f ors_c_proto.hxx 13 13 ../MAKEBIN/aisc_mkpt $(CPP_OBJECTS:.o=.cxx) | grep -v '::' >ors_c_proto.hxx 14 depend: 15 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 14 15 DEPENDS = $(CPP_OBJECTS:.o=.depend) 16 depends: $(DEPENDS) 17 @cat $(DEPENDS) | grep -v '^#' >>Makefile 18 @rm $(DEPENDS) 19 $(DEPENDS): depend.init 20 depend.init: 21 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 22 .c.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 .cxx.depend: 25 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 26 16 27 # DO NOT DELETE THIS LINE -- make depend depends on it. 17 28 … … 22 33 ORS_C_main.o: $(ARBHOME)/INCLUDE/client.h 23 34 ORS_C_main.o: $(ARBHOME)/INCLUDE/servercntrl.h 24 ORS_C_main.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h 25 ORS_C_main.o: ors_c.hxx ors_c_proto.hxx 35 ORS_C_main.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h ors_c.hxx 36 ORS_C_main.o: ors_c_proto.hxx 37 26 38 ORS_C_PT.o: $(ARBHOME)/INCLUDE/arbdb.h 27 39 ORS_C_PT.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 30 42 ORS_C_PT.o: $(ARBHOME)/INCLUDE/client.h 31 43 ORS_C_PT.o: $(ARBHOME)/INCLUDE/servercntrl.h 32 ORS_C_PT.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h 33 ORS_C_PT.o: ors_c.hxx ors_c_proto.hxx 44 ORS_C_PT.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h ors_c.hxx 45 ORS_C_PT.o: ors_c_proto.hxx 46 34 47 ORS_C_html.o: $(ARBHOME)/INCLUDE/arbdb.h 35 48 ORS_C_html.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 38 51 ORS_C_html.o: $(ARBHOME)/INCLUDE/client.h 39 52 ORS_C_html.o: $(ARBHOME)/INCLUDE/servercntrl.h ors_lib.h 40 ORS_C_html.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 41 ORS_C_html.o: ors_c_java.hxx ors_c.hxx ors_c_proto.hxx 53 ORS_C_html.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_c_java.hxx ors_c.hxx 54 ORS_C_html.o: ors_c_proto.hxx 55 42 56 ORS_C_java.o: $(ARBHOME)/INCLUDE/arbdb.h 43 57 ORS_C_java.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 47 61 ORS_C_java.o: $(ARBHOME)/INCLUDE/ors_client.h 48 62 ORS_C_java.o: $(ARBHOME)/INCLUDE/client.h 49 ORS_C_java.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 50 ORS_C_java.o: ors_c_java.hxx ors_c.hxx ors_c_proto.hxx 63 ORS_C_java.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_c_java.hxx ors_c.hxx 64 ORS_C_java.o: ors_c_proto.hxx 65 51 66 ORS_C_user.o: $(ARBHOME)/INCLUDE/arbdb.h 52 67 ORS_C_user.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 55 70 ORS_C_user.o: $(ARBHOME)/INCLUDE/client.h 56 71 ORS_C_user.o: $(ARBHOME)/INCLUDE/servercntrl.h 57 ORS_C_user.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 58 ORS_C_user.o: ors_c_java.hxx ors_c.hxx ors_c_proto.hxx 72 ORS_C_user.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_c_java.hxx ors_c.hxx 73 ORS_C_user.o: ors_c_proto.hxx 74 59 75 ORS_C_lib.o: $(ARBHOME)/INCLUDE/arbdb.h 60 76 ORS_C_lib.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 63 79 ORS_C_lib.o: $(ARBHOME)/INCLUDE/client.h 64 80 ORS_C_lib.o: $(ARBHOME)/INCLUDE/servercntrl.h ors_lib.h 65 ORS_C_lib.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_c_java.hxx 66 ORS_C_lib.o: ors_c.hxx ors_c_proto.hxx 81 ORS_C_lib.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_c_java.hxx ors_c.hxx 82 ORS_C_lib.o: ors_c_proto.hxx 83 67 84 ORS_C_java_main.o: $(ARBHOME)/INCLUDE/arbdb.h 68 85 ORS_C_java_main.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 71 88 ORS_C_java_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 72 89 ORS_C_java_main.o: $(ARBHOME)/INCLUDE/ors_client.h 73 ORS_C_java_main.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 74 ORS_C_java_main.o: ors_lib.h ors_c_java.hxx ors_c.hxx ors_c_proto.hxx 90 ORS_C_java_main.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h 91 ORS_C_java_main.o: ors_c_java.hxx ors_c.hxx ors_c_proto.hxx 92 75 93 ORS_C_scripts.o: $(ARBHOME)/INCLUDE/arbdb.h 76 94 ORS_C_scripts.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 79 97 ORS_C_scripts.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h 80 98 ORS_C_scripts.o: ors_c_java.hxx ors_c.hxx ors_c_proto.hxx 99 81 100 ORS_C_probe.o: $(ARBHOME)/INCLUDE/arbdb.h 82 101 ORS_C_probe.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 85 104 ORS_C_probe.o: $(ARBHOME)/INCLUDE/client.h 86 105 ORS_C_probe.o: $(ARBHOME)/INCLUDE/servercntrl.h 87 ORS_C_probe.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h 88 ORS_C_probe.o: ors_c.hxx ors_c_proto.hxx 89 ORS_lib.o: $(ARBHOME)/INCLUDE/arbdb.h 106 ORS_C_probe.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_lib.h ors_c.hxx 107 ORS_C_probe.o: ors_c_proto.hxx 108 109 ORS_lib.o: $(ARBHOME)/INCLUDE/arbdb.h 90 110 ORS_lib.o: $(ARBHOME)/INCLUDE/arb_assert.h 91 ORS_lib.o: $(ARBHOME)/INCLUDE/ad_prot.h 111 ORS_lib.o: $(ARBHOME)/INCLUDE/ad_prot.h 92 112 ORS_lib.o: $(ARBHOME)/INCLUDE/ors_client.h 93 113 ORS_lib.o: $(ARBHOME)/INCLUDE/client.h 94 114 ORS_lib.o: $(ARBHOME)/INCLUDE/servercntrl.h ors_lib.h 115 95 116 ORS_C_rtok.o: $(ARBHOME)/INCLUDE/arbdb.h 96 117 ORS_C_rtok.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 99 120 ORS_C_rtok.o: $(ARBHOME)/INCLUDE/client.h 100 121 ORS_C_rtok.o: $(ARBHOME)/INCLUDE/servercntrl.h ors_lib.h 101 ORS_C_rtok.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 102 ORS_C_rtok.o: ors_c_ java.hxx ors_c.hxx ors_c_proto.hxx122 ORS_C_rtok.o: $(ARBHOME)/INCLUDE/cat_tree.hxx ors_c_java.hxx ors_c.hxx 123 ORS_C_rtok.o: ors_c_proto.hxx -
trunk/ORS_COM/Makefile
r1453 r1617 18 18 "CLIENTCOMPILER = $(CLIENTCOMPILER)" "AR = $(AR)" 19 19 20 depend: 21 @echo "MGR COM no automatic dependencies" 20 depends: 21 @echo "no automatic dependencies for ORS_COM - skipped" 22 22 23 clean: 23 24 $(MAKE) $(makeflags) -f AISC/Makefile clean 25 26 # DO NOT DELETE -
trunk/ORS_SERVER/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 OBJECTS = ORS_S_main.o ORS_S_userdb.o ORS_S_probedb.o ORS_S_lib.o ORS_S_cf.o ORS_lib.o 4 4 5 5 $(MAIN): ors_s_proto.hxx $(OBJECTS) 6 6 $(AR) $(MAIN) $(OBJECTS) $(CRYPTLIB) 7 .c.o: 7 .c.o: 8 8 $(ACC) $(cflags) -c $< $(AINCLUDES) 9 .cxx.o: 9 .cxx.o: 10 10 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 11 11 ors_s_proto.hxx: $(OBJECTS:.o=.cxx) … … 14 14 proto: ors_s_proto.hxx 15 15 16 depend: 17 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx) 16 DEPENDS = $(OBJECTS:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 .cxx.depend: 26 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 18 27 19 28 # DO NOT DELETE THIS LINE -- make depend depends on it. 20 29 21 ORS_S_main.o: ./ors_lib.h $(ARBHOME)/INCLUDE/ors_server.h30 ORS_S_main.o: ors_lib.h $(ARBHOME)/INCLUDE/ors_server.h 22 31 ORS_S_main.o: $(ARBHOME)/INCLUDE/ors_client.h ors_s.h 23 32 ORS_S_main.o: $(ARBHOME)/INCLUDE/arbdb.h … … 29 38 ORS_S_main.o: $(ARBHOME)/INCLUDE/client.h 30 39 ORS_S_main.o: $(ARBHOME)/INCLUDE/servercntrl.h 31 ORS_S_main.o: $(ARBHOME)/INCLUDE/struct_man.h 32 ORS_S_main.o: ors_s_common.hxx ors_s_proto.hxx 33 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/ors_server.h ./ors_lib.h 40 ORS_S_main.o: $(ARBHOME)/INCLUDE/struct_man.h ors_s_common.hxx 41 ORS_S_main.o: ors_s_proto.hxx 42 43 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/ors_server.h ors_lib.h 34 44 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/arbdb.h 35 45 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/arb_assert.h 36 46 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/ad_prot.h 37 47 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/arbdbt.h 38 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 39 ORS_S_userdb.o: ors_s_ common.hxx ors_s_proto.hxx40 ORS_S_probedb.o: ./ors_lib.h 41 ORS_S_probedb.o: $(ARBHOME)/INCLUDE/ors_server.h48 ORS_S_userdb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ors_s_common.hxx 49 ORS_S_userdb.o: ors_s_proto.hxx 50 51 ORS_S_probedb.o: ors_lib.h $(ARBHOME)/INCLUDE/ors_server.h 42 52 ORS_S_probedb.o: $(ARBHOME)/INCLUDE/ors_client.h 43 53 ORS_S_probedb.o: $(ARBHOME)/INCLUDE/arbdb.h … … 52 62 ORS_S_probedb.o: $(ARBHOME)/INCLUDE/struct_man.h ors_s.h 53 63 ORS_S_probedb.o: ors_s_common.hxx ors_s_proto.hxx 54 ORS_S_lib.o: $(ARBHOME)/INCLUDE/ors_server.h ./ors_lib.h 64 65 ORS_S_lib.o: $(ARBHOME)/INCLUDE/ors_server.h ors_lib.h 55 66 ORS_S_lib.o: $(ARBHOME)/INCLUDE/arbdb.h 56 67 ORS_S_lib.o: $(ARBHOME)/INCLUDE/arb_assert.h 57 68 ORS_S_lib.o: $(ARBHOME)/INCLUDE/ad_prot.h 58 69 ORS_S_lib.o: $(ARBHOME)/INCLUDE/arbdbt.h 59 ORS_S_lib.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 60 ORS_S_lib.o: ors_s_common.hxx ors_s_proto.hxx 70 ORS_S_lib.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ors_s_common.hxx 71 ORS_S_lib.o: ors_s_proto.hxx 72 61 73 ORS_S_cf.o: $(ARBHOME)/INCLUDE/ors_server.h 62 74 ORS_S_cf.o: $(ARBHOME)/INCLUDE/ors_client.h ors_s.h … … 66 78 ORS_S_cf.o: $(ARBHOME)/INCLUDE/ors_prototypes.h 67 79 ORS_S_cf.o: $(ARBHOME)/INCLUDE/server.h 68 ORS_S_cf.o: $(ARBHOME)/INCLUDE/aisc_func_types.h 69 ORS_S_cf.o: ./ors_lib.h$(ARBHOME)/INCLUDE/client.h80 ORS_S_cf.o: $(ARBHOME)/INCLUDE/aisc_func_types.h ors_lib.h 81 ORS_S_cf.o: $(ARBHOME)/INCLUDE/client.h 70 82 ORS_S_cf.o: $(ARBHOME)/INCLUDE/servercntrl.h 71 ORS_S_cf.o: $(ARBHOME)/INCLUDE/struct_man.h 72 ORS_S_cf.o: ors_s_common.hxx ors_s_proto.hxx 83 ORS_S_cf.o: $(ARBHOME)/INCLUDE/struct_man.h ors_s_common.hxx 84 ORS_S_cf.o: ors_s_proto.hxx 85 73 86 ORS_lib.o: $(ARBHOME)/INCLUDE/arbdb.h 74 87 ORS_lib.o: $(ARBHOME)/INCLUDE/arb_assert.h 75 ORS_lib.o: $(ARBHOME)/INCLUDE/ad_prot.h 88 ORS_lib.o: $(ARBHOME)/INCLUDE/ad_prot.h 76 89 ORS_lib.o: $(ARBHOME)/INCLUDE/ors_client.h 77 90 ORS_lib.o: $(ARBHOME)/INCLUDE/client.h 78 ORS_lib.o: $(ARBHOME)/INCLUDE/servercntrl.h ./ors_lib.h91 ORS_lib.o: $(ARBHOME)/INCLUDE/servercntrl.h ors_lib.h -
trunk/PARSIMONY/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 CPP_OBJECTS = PARS_main.o PARS_dtree.o PARS_debug.o PARS_klprops.o AP_buffer.o AP_main.o AP_tree_nlen.o AP_tree_edge.o 4 4 … … 6 6 $(AR) $(MAIN) $(CPP_OBJECTS) 7 7 8 .cxx.o: 8 .cxx.o: 9 9 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 10 11 depend: 12 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 11 DEPENDS = $(CPP_OBJECTS:.o=.depend) 12 depends: $(DEPENDS) 13 @cat $(DEPENDS) | grep -v '^#' >>Makefile 14 @rm $(DEPENDS) 15 $(DEPENDS): depend.init 16 depend.init: 17 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 18 .c.depend: 19 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 20 .cxx.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 13 22 14 23 # DO NOT DELETE THIS LINE -- make depend depends on it. … … 33 42 PARS_main.o: $(ARBHOME)/INCLUDE/awt_tree_cb.hxx 34 43 PARS_main.o: $(ARBHOME)/INCLUDE/awt_csp.hxx AP_buffer.hxx 35 PARS_main.o: parsimony.hxx ap_tree_nlen.hxx 36 PARS_main.o: pars_main.hxx pars_dtree.hxx 44 PARS_main.o: parsimony.hxx ap_tree_nlen.hxx pars_main.hxx pars_dtree.hxx 45 37 46 PARS_dtree.o: $(ARBHOME)/INCLUDE/arbdb.h 38 47 PARS_dtree.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 52 61 PARS_dtree.o: $(ARBHOME)/INCLUDE/awt_csp.hxx 53 62 PARS_dtree.o: $(ARBHOME)/INCLUDE/awt.hxx 54 PARS_dtree.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 55 PARS_dtree.o: pars_dtree.hxx AP_buffer.hxx parsimony.hxx ap_tree_nlen.hxx 56 PARS_dtree.o: pars_main.hxx pars_debug.hxx 63 PARS_dtree.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx pars_dtree.hxx 64 PARS_dtree.o: AP_buffer.hxx parsimony.hxx ap_tree_nlen.hxx pars_main.hxx 65 PARS_dtree.o: pars_debug.hxx 66 57 67 PARS_debug.o: $(ARBHOME)/INCLUDE/arbdb.h 58 68 PARS_debug.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 60 70 PARS_debug.o: $(ARBHOME)/INCLUDE/aw_root.hxx 61 71 PARS_debug.o: $(ARBHOME)/INCLUDE/aw_device.hxx 62 PARS_debug.o: $(ARBHOME)/INCLUDE/aw_window.hxx 63 PARS_debug.o: pars_debug.hxx 72 PARS_debug.o: $(ARBHOME)/INCLUDE/aw_window.hxx pars_debug.hxx 73 64 74 PARS_klprops.o: $(ARBHOME)/INCLUDE/arbdb.h 65 75 PARS_klprops.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 79 89 PARS_klprops.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 80 90 PARS_klprops.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 81 PARS_klprops.o: $(ARBHOME)/INCLUDE/awt_tree_cb.hxx 82 PARS_klprops.o: AP_buffer.hxx parsimony.hxx ap_tree_nlen.hxx83 PARS_klprops.o: pars_main.hxx pars_dtree.hxx 91 PARS_klprops.o: $(ARBHOME)/INCLUDE/awt_tree_cb.hxx AP_buffer.hxx 92 PARS_klprops.o: parsimony.hxx ap_tree_nlen.hxx pars_main.hxx pars_dtree.hxx 93 84 94 AP_buffer.o: $(ARBHOME)/INCLUDE/arbdb.h 85 95 AP_buffer.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 90 100 AP_buffer.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 91 101 AP_buffer.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 92 AP_buffer.o: AP_buffer.hxx AP_error.hxx 102 AP_buffer.o: $(ARBHOME)/INCLUDE/aw_root.hxx AP_buffer.hxx AP_error.hxx 103 93 104 AP_main.o: $(ARBHOME)/INCLUDE/arbdb.h 94 105 AP_main.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 99 110 AP_main.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 100 111 AP_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 101 AP_main.o: AP_buffer.hxx parsimony.hxx AP_error.hxx 112 AP_main.o: $(ARBHOME)/INCLUDE/aw_root.hxx AP_buffer.hxx parsimony.hxx 113 AP_main.o: AP_error.hxx 114 102 115 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/arbdb.h 103 116 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 108 121 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 109 122 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 110 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx111 AP_tree_nlen.o: AP_buffer.hxx parsimony.hxx pars_debug.hxx ap_tree_nlen.hxx112 123 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/aw_root.hxx 124 AP_tree_nlen.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx AP_buffer.hxx 125 AP_tree_nlen.o: parsimony.hxx pars_debug.hxx ap_tree_nlen.hxx 126 113 127 AP_tree_edge.o: $(ARBHOME)/INCLUDE/arbdb.h 114 128 AP_tree_edge.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 119 133 AP_tree_edge.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 120 134 AP_tree_edge.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 121 AP_tree_edge.o: AP_buffer.hxx parsimony.hxx ap_tree_nlen.hxx122 AP_tree_edge.o: $(ARBHOME)/INCLUDE/aw_root.hxx135 AP_tree_edge.o: $(ARBHOME)/INCLUDE/aw_root.hxx AP_buffer.hxx 136 AP_tree_edge.o: parsimony.hxx ap_tree_nlen.hxx -
trunk/PHYLO/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 CPP_OBJECTS = PH_data.o PH_root.o PH_main.o PH_filt.o PH_display.o PH_matr.o … … 8 8 $(AR) $(MAIN) $(CPP_OBJECTS) 9 9 10 .cxx.o: 10 .cxx.o: 11 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 12 13 depend: 14 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 15 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 16 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 17 24 18 25 # DO NOT DELETE THIS LINE -- make depend depends on it. 19 26 20 PH_data.o: include.hxx 21 PH_data.o: $(ARBHOME)/INCLUDE/arbdb.h 27 PH_data.o: include.hxx $(ARBHOME)/INCLUDE/arbdb.h 22 28 PH_data.o: $(ARBHOME)/INCLUDE/arb_assert.h 23 29 PH_data.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 33 39 PH_data.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 34 40 PH_data.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 35 PH_data.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx 36 PH_data.o: phwin.hxx$(ARBHOME)/INCLUDE/awt_seq_dna.hxx37 PH_root.o: include.hxx 38 PH_root.o: $(ARBHOME)/INCLUDE/arbdb.h41 PH_data.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx phwin.hxx 42 PH_data.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx 43 44 PH_root.o: include.hxx $(ARBHOME)/INCLUDE/arbdb.h 39 45 PH_root.o: $(ARBHOME)/INCLUDE/arb_assert.h 40 46 PH_root.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 50 56 PH_root.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 51 57 PH_root.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 52 PH_root.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx 53 PH_root.o: phwin.hxx$(ARBHOME)/INCLUDE/awt_seq_dna.hxx54 PH_main.o: include.hxx 55 PH_main.o: $(ARBHOME)/INCLUDE/arbdb.h58 PH_root.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx phwin.hxx 59 PH_root.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx 60 61 PH_main.o: include.hxx $(ARBHOME)/INCLUDE/arbdb.h 56 62 PH_main.o: $(ARBHOME)/INCLUDE/arb_assert.h 57 63 PH_main.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 67 73 PH_main.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 68 74 PH_main.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 69 PH_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx 70 PH_main.o: phwin.hxx $(ARBHOME)/INCLUDE/awt_seq_dna.hxx 71 PH_main.o: PH_display.hxx 72 PH_filt.o: include.hxx 73 PH_filt.o: $(ARBHOME)/INCLUDE/arbdb.h 75 PH_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx phwin.hxx 76 PH_main.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx PH_display.hxx 77 78 PH_filt.o: include.hxx $(ARBHOME)/INCLUDE/arbdb.h 74 79 PH_filt.o: $(ARBHOME)/INCLUDE/arb_assert.h 75 80 PH_filt.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 85 90 PH_filt.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 86 91 PH_filt.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 87 PH_filt.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx 88 PH_filt.o: phwin.hxx$(ARBHOME)/INCLUDE/awt_seq_dna.hxx89 PH_display.o: include.hxx 90 PH_display.o: $(ARBHOME)/INCLUDE/arbdb.h92 PH_filt.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx phwin.hxx 93 PH_filt.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx 94 95 PH_display.o: include.hxx $(ARBHOME)/INCLUDE/arbdb.h 91 96 PH_display.o: $(ARBHOME)/INCLUDE/arb_assert.h 92 97 PH_display.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 102 107 PH_display.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 103 108 PH_display.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 104 PH_display.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 105 PH_display.o: phylo.hxx phwin.hxx 106 PH_display.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx 109 PH_display.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx 110 PH_display.o: phwin.hxx $(ARBHOME)/INCLUDE/awt_seq_dna.hxx 107 111 PH_display.o: PH_display.hxx 108 PH_matr.o: include.hxx 109 PH_matr.o: $(ARBHOME)/INCLUDE/arbdb.h112 113 PH_matr.o: include.hxx $(ARBHOME)/INCLUDE/arbdb.h 110 114 PH_matr.o: $(ARBHOME)/INCLUDE/arb_assert.h 111 115 PH_matr.o: $(ARBHOME)/INCLUDE/ad_prot.h … … 121 125 PH_matr.o: $(ARBHOME)/INCLUDE/awt_tree.hxx 122 126 PH_matr.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 123 PH_matr.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx 124 PH_matr.o: phwin.hxx$(ARBHOME)/INCLUDE/awt_seq_dna.hxx127 PH_matr.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx phylo.hxx phwin.hxx 128 PH_matr.o: $(ARBHOME)/INCLUDE/awt_seq_dna.hxx -
trunk/PRIMER_DESIGN/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 CPPINCLUDES = $(CPPINCLUDES) #-I~/STL … … 17 17 $(MAIN): $(CPP_OBJECTS) 18 18 $(XAR) $(MAIN) $(CPP_OBJECTS) 19 # $(MAKE) ./prd_test19 # $(MAKE) prd_test 20 20 21 21 ./prd_test: $(MAIN) PRD_main.o … … 32 32 # clean 33 33 34 depend: 35 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 36 34 DEPENDS = $(CPP_OBJECTS:.o=.depend) 35 depends: $(DEPENDS) 36 @cat $(DEPENDS) | grep -v '^#' >>Makefile 37 @rm $(DEPENDS) 38 $(DEPENDS): depend.init 39 depend.init: 40 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 41 .c.depend: 42 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 43 .cxx.depend: 44 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 37 45 38 46 # DO NOT DELETE 39 47 40 PRD_Pair.o: PRD_Pair.hxx PRD_Item.hxx PRD_Globals.hxx 41 PRD_Item.o: PRD_Item.hxx PRD_Globals.hxx 42 PRD_Item.o: PRD_SequenceIterator.hxx 43 PRD_Node.o: PRD_Node.hxx PRD_Globals.hxx 44 PRD_Range.o: PRD_Range.hxx PRD_Globals.hxx 45 PRD_SequenceIterator.o: PRD_SequenceIterator.hxx 46 PRD_SearchFIFO.o: PRD_SearchFIFO.hxx PRD_Globals.hxx 47 PRD_SearchFIFO.o: PRD_Node.hxx PRD_Range.hxx 48 PRD_Design.o: PRD_Globals.hxx 49 PRD_Design.o: PRD_Design.hxx PRD_Range.hxx PRD_Node.hxx PRD_Item.hxx 50 PRD_Design.o: PRD_Pair.hxx $(ARBHOME)/INCLUDE/arbdb.h 48 PRD_Pair.o: PRD_Pair.hxx PRD_Item.hxx PRD_Globals.hxx 49 50 PRD_Item.o: PRD_Item.hxx PRD_Globals.hxx PRD_SequenceIterator.hxx 51 52 PRD_Node.o: PRD_Node.hxx PRD_Globals.hxx 53 54 PRD_Range.o: PRD_Range.hxx PRD_Globals.hxx 55 56 PRD_SequenceIterator.o: PRD_SequenceIterator.hxx PRD_Globals.hxx 57 58 PRD_SearchFIFO.o: PRD_SearchFIFO.hxx PRD_Globals.hxx PRD_Node.hxx 59 PRD_SearchFIFO.o: PRD_Range.hxx 60 61 PRD_Design.o: PRD_Globals.hxx PRD_Design.hxx PRD_Range.hxx PRD_Node.hxx 62 PRD_Design.o: PRD_Item.hxx PRD_Pair.hxx $(ARBHOME)/INCLUDE/arbdb.h 51 63 PRD_Design.o: $(ARBHOME)/INCLUDE/arb_assert.h 52 PRD_Design.o: $(ARBHOME)/INCLUDE/ad_prot.h 53 PRD_Design.o: PRD_SequenceIterator.hxx PRD_SearchFIFO.hxx 64 PRD_Design.o: $(ARBHOME)/INCLUDE/ad_prot.h PRD_SequenceIterator.hxx 65 PRD_Design.o: PRD_SearchFIFO.hxx 66 54 67 primer_design.o: $(ARBHOME)/INCLUDE/arbdb.h 55 68 primer_design.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 65 78 primer_design.o: $(ARBHOME)/INCLUDE/adGene.h 66 79 primer_design.o: $(ARBHOME)/INCLUDE/awt_config_manager.hxx 67 primer_design.o: primer_design.hxx PRD_Design.hxx PRD_Range.hxx 68 primer_design.o: PRD_Globals.hxx 69 primer_design.o: PRD_Node.hxx PRD_Item.hxx PRD_Pair.hxx 80 primer_design.o: primer_design.hxx PRD_Design.hxx PRD_Globals.hxx 81 primer_design.o: PRD_Range.hxx PRD_Node.hxx PRD_Item.hxx PRD_Pair.hxx 70 82 primer_design.o: PRD_SequenceIterator.hxx -
trunk/PROBE/Makefile
r887 r1617 1 .SUFFIXES: .o .cxx 1 .SUFFIXES: .o .cxx .depend 2 2 OBJECTS = PT_new_design.o PT_family.o PT_prefixtree.o PT_main.o PT_io.o \ 3 3 PT_etc.o PT_secundaer.o \ … … 14 14 rm -f pt_prototypes.h 15 15 ../MAKEBIN/aisc_mkpt -E $(OBJECTS:.o=.cxx) probe_tree.hxx >pt_prototypes.h 16 depend: 17 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx) 16 17 DEPENDS = $(OBJECTS:.o=.depend) 18 depends: $(DEPENDS) 19 @cat $(DEPENDS) | grep -v '^#' >>Makefile 20 @rm $(DEPENDS) 21 $(DEPENDS): depend.init 22 depend.init: 23 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 24 .c.depend: 25 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 26 .cxx.depend: 27 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 28 18 29 # DO NOT DELETE THIS LINE -- make depend depends on it. 19 30 … … 24 35 PT_new_design.o: $(ARBHOME)/INCLUDE/arbdb.h 25 36 PT_new_design.o: $(ARBHOME)/INCLUDE/arb_assert.h 26 PT_new_design.o: $(ARBHOME)/INCLUDE/ad_prot.h 27 PT_new_design.o: probe_tree.hxx$(ARBHOME)/INCLUDE/arbdbt.h28 PT_new_design.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 29 PT_new_design.o: pt_prototypes.h 37 PT_new_design.o: $(ARBHOME)/INCLUDE/ad_prot.h probe_tree.hxx 38 PT_new_design.o: $(ARBHOME)/INCLUDE/arbdbt.h 39 PT_new_design.o: $(ARBHOME)/INCLUDE/ad_t_prot.h pt_prototypes.h 40 30 41 PT_family.o: $(ARBHOME)/INCLUDE/PT_server.h 31 42 PT_family.o: $(ARBHOME)/INCLUDE/struct_man.h 32 PT_family.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h 33 PT_family.o: probe.h$(ARBHOME)/INCLUDE/PT_com.h43 PT_family.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h probe.h 44 PT_family.o: $(ARBHOME)/INCLUDE/PT_com.h 34 45 PT_family.o: $(ARBHOME)/INCLUDE/arbdb.h 35 46 PT_family.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 37 48 PT_family.o: pt_prototypes.h $(ARBHOME)/INCLUDE/arbdbt.h 38 49 PT_family.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 50 39 51 PT_prefixtree.o: $(ARBHOME)/INCLUDE/PT_server.h probe.h 40 52 PT_prefixtree.o: $(ARBHOME)/INCLUDE/PT_com.h 41 53 PT_prefixtree.o: $(ARBHOME)/INCLUDE/arbdb.h 42 54 PT_prefixtree.o: $(ARBHOME)/INCLUDE/arb_assert.h 43 PT_prefixtree.o: $(ARBHOME)/INCLUDE/ad_prot.h 44 PT_prefixtree.o: probe_tree.hxx 55 PT_prefixtree.o: $(ARBHOME)/INCLUDE/ad_prot.h probe_tree.hxx 56 45 57 PT_main.o: $(ARBHOME)/INCLUDE/PT_server.h 46 PT_main.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h 47 PT_main.o: probe.h$(ARBHOME)/INCLUDE/PT_com.h58 PT_main.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h probe.h 59 PT_main.o: $(ARBHOME)/INCLUDE/PT_com.h 48 60 PT_main.o: $(ARBHOME)/INCLUDE/arbdb.h 49 61 PT_main.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 56 68 PT_main.o: $(ARBHOME)/INCLUDE/client.h 57 69 PT_main.o: $(ARBHOME)/INCLUDE/struct_man.h 70 58 71 PT_io.o: $(ARBHOME)/INCLUDE/PT_server.h probe.h 59 PT_io.o: $(ARBHOME)/INCLUDE/PT_com.h 60 PT_io.o: $(ARBHOME)/INCLUDE/arbdb.h 72 PT_io.o: $(ARBHOME)/INCLUDE/PT_com.h $(ARBHOME)/INCLUDE/arbdb.h 61 73 PT_io.o: $(ARBHOME)/INCLUDE/arb_assert.h 62 74 PT_io.o: $(ARBHOME)/INCLUDE/ad_prot.h 63 75 PT_io.o: $(ARBHOME)/INCLUDE/arbdbt.h 64 PT_io.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ./BI_helix.hxx 76 PT_io.o: $(ARBHOME)/INCLUDE/ad_t_prot.h BI_helix.hxx 77 65 78 PT_etc.o: $(ARBHOME)/INCLUDE/PT_server.h 66 79 PT_etc.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h probe.h … … 70 83 PT_etc.o: $(ARBHOME)/INCLUDE/ad_prot.h pt_prototypes.h 71 84 PT_etc.o: $(ARBHOME)/INCLUDE/struct_man.h 85 72 86 PT_secundaer.o: $(ARBHOME)/INCLUDE/PT_server.h 73 PT_secundaer.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h 74 PT_secundaer.o: probe.h$(ARBHOME)/INCLUDE/PT_com.h87 PT_secundaer.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h probe.h 88 PT_secundaer.o: $(ARBHOME)/INCLUDE/PT_com.h 75 89 PT_secundaer.o: $(ARBHOME)/INCLUDE/arbdb.h 76 90 PT_secundaer.o: $(ARBHOME)/INCLUDE/arb_assert.h 77 PT_secundaer.o: $(ARBHOME)/INCLUDE/ad_prot.h 78 PT_secundaer.o: pt_prototypes.h 91 PT_secundaer.o: $(ARBHOME)/INCLUDE/ad_prot.h pt_prototypes.h 92 79 93 PT_buildtree.o: $(ARBHOME)/INCLUDE/PT_server.h 80 PT_buildtree.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h 81 PT_buildtree.o: probe.h$(ARBHOME)/INCLUDE/PT_com.h94 PT_buildtree.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h probe.h 95 PT_buildtree.o: $(ARBHOME)/INCLUDE/PT_com.h 82 96 PT_buildtree.o: $(ARBHOME)/INCLUDE/arbdb.h 83 97 PT_buildtree.o: $(ARBHOME)/INCLUDE/arb_assert.h 84 98 PT_buildtree.o: $(ARBHOME)/INCLUDE/ad_prot.h probe_tree.hxx 85 99 PT_buildtree.o: pt_prototypes.h 100 86 101 PT_match.o: $(ARBHOME)/INCLUDE/PT_server.h 87 102 PT_match.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h … … 93 108 PT_match.o: pt_prototypes.h $(ARBHOME)/INCLUDE/arbdbt.h 94 109 PT_match.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 110 95 111 PT_findEx.o: $(ARBHOME)/INCLUDE/PT_server.h 96 PT_findEx.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h 97 PT_findEx.o: probe.h$(ARBHOME)/INCLUDE/PT_com.h112 PT_findEx.o: $(ARBHOME)/INCLUDE/PT_server_prototypes.h probe.h 113 PT_findEx.o: $(ARBHOME)/INCLUDE/PT_com.h 98 114 PT_findEx.o: $(ARBHOME)/INCLUDE/arbdb.h 99 115 PT_findEx.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/PROBE_COM/Makefile
r1453 r1617 20 20 "CLIENTCOMPILER = $(CLIENTCOMPILER)" "AR = $(AR)" 21 21 22 depend :23 @echo " MGR COM no automatic dependencies"22 depends: 23 @echo "no automatic dependencies for PROBE_COM - skipped" 24 24 25 25 clean: 26 26 $(MAKE) $(makeflags) -f AISC/Makefile clean 27 28 # DO NOT DELETE -
trunk/PROBE_DESIGN/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 CPP_OBJECTS = probe_design.o 4 4 $(MAIN): $(CPP_OBJECTS) 5 5 $(AR) $(MAIN) $(CPP_OBJECTS) 6 .cxx.o: 6 .cxx.o: 7 7 $(CPP) $(cflags) -c -o $@ $(@:.o=.cxx) $(CPPINCLUDES) 8 depend: 9 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 8 9 DEPENDS = $(CPP_OBJECTS:.o=.depend) 10 depends: $(DEPENDS) 11 @cat $(DEPENDS) | grep -v '^#' >>Makefile 12 @rm $(DEPENDS) 13 $(DEPENDS): depend.init 14 depend.init: 15 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 16 .c.depend: 17 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 18 .cxx.depend: 19 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 20 10 21 # DO NOT DELETE THIS LINE -- make depend depends on it. 11 22 … … 30 41 probe_design.o: $(ARBHOME)/INCLUDE/PT_com.h 31 42 probe_design.o: $(ARBHOME)/INCLUDE/client.h 32 probe_design.o: $(ARBHOME)/INCLUDE/servercntrl.h 33 probe_design.o: ./probe_design.hxx 43 probe_design.o: $(ARBHOME)/INCLUDE/servercntrl.h probe_design.hxx -
trunk/PROBE_SET/Makefile
r1328 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 4 4 # -------------------------------------------------------------------------------- … … 100 100 # $(CPP) $(cflags) -pg -g -a -c -o $@ $(@:.o=.cxx) $(CPPINCLUDES) 101 101 102 depend:103 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx)104 105 102 clean: 106 103 -rm *.a *.o … … 108 105 -rm $(DEST_EXECUTABLES) 109 106 107 DEPENDS = $(CPP_OBJECTS:.o=.depend) 108 depends: $(DEPENDS) 109 @cat $(DEPENDS) | grep -v '^#' >>Makefile 110 @rm $(DEPENDS) 111 $(DEPENDS): depend.init 112 depend.init: 113 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 114 .c.depend: 115 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 116 .cxx.depend: 117 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 118 110 119 # DO NOT DELETE 111 120 112 121 ps_node.o: ps_node.hxx $(ARBHOME)/INCLUDE/smartptr.h 113 122 ps_node.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_defs.hxx 114 ps_node.o: ps_filebuffer.hxx 115 ps_filebuffer.o: ps_filebuffer.hxx 123 ps_node.o: ps_filebuffer.hxx 124 125 ps_filebuffer.o: ps_filebuffer.hxx 126 116 127 ps_database.o: ps_database.hxx ps_defs.hxx ps_node.hxx 117 128 ps_database.o: $(ARBHOME)/INCLUDE/smartptr.h 118 129 ps_database.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_filebuffer.hxx 119 fb_test.o: ps_bitmap.hxx ps_bitset.hxx 120 fb_test.o: ps_ filebuffer.hxx121 fb_test.o: ps_ defs.hxx ps_node.hxx $(ARBHOME)/INCLUDE/smartptr.h130 131 fb_test.o: ps_bitmap.hxx ps_bitset.hxx ps_filebuffer.hxx ps_defs.hxx 132 fb_test.o: ps_node.hxx $(ARBHOME)/INCLUDE/smartptr.h 122 133 fb_test.o: $(ARBHOME)/INCLUDE/arb_assert.h 123 ps_convert_db.o: ps_database.hxx 124 ps_convert_db.o: ps_d efs.hxx ps_node.hxx134 135 ps_convert_db.o: ps_database.hxx ps_defs.hxx ps_node.hxx 125 136 ps_convert_db.o: $(ARBHOME)/INCLUDE/smartptr.h 126 137 ps_convert_db.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_filebuffer.hxx 127 ps_convert_db.o: ps_pg_tree_functions.cxx 128 ps_convert_db.o: $(ARBHOME)/INCLUDE/arbdb.h 138 ps_convert_db.o: ps_pg_tree_functions.cxx $(ARBHOME)/INCLUDE/arbdb.h 129 139 ps_convert_db.o: $(ARBHOME)/INCLUDE/ad_prot.h 130 ps_merge_my_dbs.o: ps_database.hxx ps_defs.hxx 131 ps_merge_my_dbs.o: ps_node.hxx $(ARBHOME)/INCLUDE/smartptr.h 132 ps_merge_my_dbs.o: $(ARBHOME)/INCLUDE/arb_assert.h 133 ps_merge_my_dbs.o: ps_filebuffer.hxx 140 141 ps_merge_my_dbs.o: ps_database.hxx ps_defs.hxx ps_node.hxx 142 ps_merge_my_dbs.o: $(ARBHOME)/INCLUDE/smartptr.h 143 ps_merge_my_dbs.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_filebuffer.hxx 144 134 145 ps_detect_weak_differences.o: ps_database.hxx ps_defs.hxx ps_node.hxx 135 146 ps_detect_weak_differences.o: $(ARBHOME)/INCLUDE/smartptr.h 136 147 ps_detect_weak_differences.o: $(ARBHOME)/INCLUDE/arb_assert.h 137 ps_detect_weak_differences.o: ps_filebuffer.hxx 138 ps_detect_weak_differences.o: ps_bitmap.hxx 139 ps_detect_weak_differences.o: ps_bitset.hxx 140 ps_find_probes.o: ps_database.hxx ps_defs.hxx ps_node.hxx 148 ps_detect_weak_differences.o: ps_filebuffer.hxx ps_bitmap.hxx ps_bitset.hxx 149 150 ps_find_probes.o: ps_database.hxx ps_defs.hxx ps_node.hxx 141 151 ps_find_probes.o: $(ARBHOME)/INCLUDE/smartptr.h 142 ps_find_probes.o: $(ARBHOME)/INCLUDE/arb_assert.h 143 ps_find_probes.o: ps_filebuffer.hxx 144 ps_find_probes.o: ps_bitmap.hxx ps_bitset.hxx 145 ps_find_probes.o: ps_candidate.hxx 146 ps_eval_candidates.o: ps_database.hxx ps_defs.hxx ps_node.hxx 152 ps_find_probes.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_filebuffer.hxx 153 ps_find_probes.o: ps_bitmap.hxx ps_bitset.hxx ps_candidate.hxx 154 155 ps_eval_candidates.o: ps_database.hxx ps_defs.hxx ps_node.hxx 147 156 ps_eval_candidates.o: $(ARBHOME)/INCLUDE/smartptr.h 148 ps_eval_candidates.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_filebuffer.hxx 149 ps_eval_candidates.o: ps_candidate.hxx 150 ps_my2ascii.o: ps_filebuffer.hxx 151 ps_my2ascii.o: ps_node.hxx $(ARBHOME)/INCLUDE/smartptr.h 157 ps_eval_candidates.o: $(ARBHOME)/INCLUDE/arb_assert.h 158 ps_eval_candidates.o: ps_filebuffer.hxx ps_candidate.hxx ps_bitmap.hxx 159 ps_eval_candidates.o: ps_bitset.hxx 160 161 ps_my2ascii.o: ps_filebuffer.hxx ps_node.hxx 162 ps_my2ascii.o: $(ARBHOME)/INCLUDE/smartptr.h 152 163 ps_my2ascii.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_defs.hxx 153 ps_my2asciipaths.o: ps_defs.hxx ps_node.hxx 164 165 ps_my2asciipaths.o: ps_defs.hxx ps_node.hxx 154 166 ps_my2asciipaths.o: $(ARBHOME)/INCLUDE/smartptr.h 155 ps_my2asciipaths.o: $(ARBHOME)/INCLUDE/arb_assert.h 156 ps_my2asciipaths.o: ps_filebuffer.hxx 167 ps_my2asciipaths.o: $(ARBHOME)/INCLUDE/arb_assert.h ps_filebuffer.hxx 168 157 169 ps_arb2asciipaths.o: $(ARBHOME)/INCLUDE/arbdb.h 170 ps_arb2asciipaths.o: $(ARBHOME)/INCLUDE/arb_assert.h 158 171 ps_arb2asciipaths.o: $(ARBHOME)/INCLUDE/ad_prot.h ps_defs.hxx 159 ps_arb2asciipaths.o: ps_filebuffer.hxx 160 ps_arb2asciipaths.o: ps_pg_tree_functions.cxx 161 ps_show_result.o: ps_defs.hxx ps_filebuffer.hxx 162 ps_show_result.o: ps_bitmap.hxx ps_bitset.hxx 172 ps_arb2asciipaths.o: ps_filebuffer.hxx ps_pg_tree_functions.cxx 173 174 ps_show_result.o: ps_defs.hxx ps_filebuffer.hxx ps_bitmap.hxx ps_bitset.hxx -
trunk/READSEQ/Makefile
r1450 r1617 1 1 OBJECT = readseq.o ureadseq.o 2 2 3 .SUFFIXES: .o .c .cxx 3 .SUFFIXES: .o .c .cxx .depend 4 4 5 5 ifdef DEBIAN … … 28 28 $(SUB_ACC) $(cflags) -c $< $(AINCLUDES) 29 29 30 depend: 31 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECT:.o=.c*) 30 DEPENDS = $(OBJECT:.o=.depend) 31 depends: $(DEPENDS) 32 @cat $(DEPENDS) | grep -v '^#' >>Makefile 33 @rm $(DEPENDS) 34 $(DEPENDS): depend.init 35 depend.init: 36 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 37 .c.depend: 38 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 39 .cxx.depend: 40 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 32 41 33 42 # DO NOT DELETE THIS LINE -- make depend depends on it. 34 43 35 readseq.o: ureadseq.h 36 ureadseq.o: ureadseq.h 44 readseq.o: ureadseq.h 45 46 ureadseq.o: ureadseq.h -
trunk/SECEDIT/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 … … 9 9 $(AR) $(MAIN) $(CPP_OBJECTS) 10 10 11 .cxx.o: 11 .cxx.o: 12 12 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 13 13 14 depend: 15 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 14 DEPENDS = $(CPP_OBJECTS:.o=.depend) 15 depends: $(DEPENDS) 16 @cat $(DEPENDS) | grep -v '^#' >>Makefile 17 @rm $(DEPENDS) 18 $(DEPENDS): depend.init 19 depend.init: 20 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 21 .c.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 .cxx.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 16 25 17 26 # DO NOT DELETE THIS LINE -- make depend depends on it. … … 29 38 SEC_graphic.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 30 39 SEC_graphic.o: $(ARBHOME)/INCLUDE/awt.hxx 31 SEC_graphic.o: $(ARBHOME)/INCLUDE/BI_helix.hxx 32 SEC_graphic.o: sec _graphic.hxx33 SEC_graphic.o: secedit.hxx 40 SEC_graphic.o: $(ARBHOME)/INCLUDE/BI_helix.hxx sec_graphic.hxx 41 SEC_graphic.o: secedit.hxx 42 34 43 SEC_main.o: $(ARBHOME)/INCLUDE/arbdb.h 35 44 SEC_main.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 45 54 SEC_main.o: $(ARBHOME)/INCLUDE/awt.hxx 46 55 SEC_main.o: $(ARBHOME)/INCLUDE/BI_helix.hxx sec_graphic.hxx 47 SEC_main.o: 56 SEC_main.o: secedit.hxx ../EDIT4/ed4_defs.hxx 48 57 SEC_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 49 58 SEC_main.o: ../EDIT4/ed4_class.hxx ../EDIT4/ed4_defs.hxx 50 59 SEC_main.o: ../EDIT4/ed4_search.hxx 60 51 61 SEC_io.o: $(ARBHOME)/INCLUDE/arbdb.h 52 62 SEC_io.o: $(ARBHOME)/INCLUDE/arb_assert.h 53 63 SEC_io.o: $(ARBHOME)/INCLUDE/ad_prot.h 54 64 SEC_io.o: $(ARBHOME)/INCLUDE/aw_root.hxx secedit.hxx 65 55 66 SEC_read.o: $(ARBHOME)/INCLUDE/arbdb.h 56 67 SEC_read.o: $(ARBHOME)/INCLUDE/arb_assert.h 57 68 SEC_read.o: $(ARBHOME)/INCLUDE/ad_prot.h 58 69 SEC_read.o: $(ARBHOME)/INCLUDE/aw_root.hxx 59 SEC_read.o: $(ARBHOME)/INCLUDE/aw_device.hxx 60 SEC_read.o: secedit.hxx 70 SEC_read.o: $(ARBHOME)/INCLUDE/aw_device.hxx secedit.hxx 71 61 72 SEC_split.o: $(ARBHOME)/INCLUDE/arbdb.h 62 73 SEC_split.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 64 75 SEC_split.o: $(ARBHOME)/INCLUDE/aw_root.hxx 65 76 SEC_split.o: $(ARBHOME)/INCLUDE/aw_device.hxx secedit.hxx 77 66 78 SEC_paint.o: $(ARBHOME)/INCLUDE/arbdb.h 67 79 SEC_paint.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 72 84 SEC_paint.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 73 85 SEC_paint.o: $(ARBHOME)/INCLUDE/BI_helix.hxx secedit.hxx 74 SEC_paint.o: sec_graphic.hxx 75 SEC_paint.o: ../EDIT4/ed4_class.hxx 76 SEC_paint.o: ../EDIT4/ed4_defs.hxx ../EDIT4/ed4_search.hxx 77 SEC_paint.o: ../EDIT4/ed4_defs.hxx 86 SEC_paint.o: sec_graphic.hxx ../EDIT4/ed4_class.hxx ../EDIT4/ed4_defs.hxx 78 87 SEC_paint.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 88 SEC_paint.o: ../EDIT4/ed4_search.hxx ../EDIT4/ed4_defs.hxx 89 SEC_paint.o: ../EDIT4/ed4_visualizeSAI.hxx -
trunk/SEER/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 … … 11 11 12 12 13 .cxx.o: 13 .cxx.o: 14 14 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 15 15 16 depend: 17 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 16 DEPENDS = $(CPP_OBJECTS:.o=.depend) 17 depends: $(DEPENDS) 18 @cat $(DEPENDS) | grep -v '^#' >>Makefile 19 @rm $(DEPENDS) 20 $(DEPENDS): depend.init 21 depend.init: 22 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 23 .c.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 .cxx.depend: 26 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 27 18 28 # DO NOT DELETE THIS LINE -- make depend depends on it. 19 29 … … 32 42 SEER_main.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 33 43 SEER_main.o: $(ARBHOME)/INCLUDE/awt_dtree.hxx 34 SEER_main.o: $(ARBHOME)/INCLUDE/ntree.hxx ./seer.hxx 35 SEER_main.o: ./seer_interface.hxx 36 SEER_interface.o: ./seer_interface.hxx 44 SEER_main.o: $(ARBHOME)/INCLUDE/ntree.hxx seer.hxx 45 SEER_main.o: seer_interface.hxx 46 47 SEER_interface.o: seer_interface.hxx 48 37 49 SEER_connect.o: $(ARBHOME)/INCLUDE/arbdb.h 38 50 SEER_connect.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 40 52 SEER_connect.o: $(ARBHOME)/INCLUDE/arbdbt.h 41 53 SEER_connect.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 42 SEER_connect.o: $(ARBHOME)/INCLUDE/aw_root.hxx ./seer.hxx 43 SEER_connect.o: ./seer_interface.hxx 54 SEER_connect.o: $(ARBHOME)/INCLUDE/aw_root.hxx seer.hxx 55 SEER_connect.o: seer_interface.hxx 56 44 57 SEER_arb.o: $(ARBHOME)/INCLUDE/arbdb.h 45 58 SEER_arb.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 52 65 SEER_arb.o: $(ARBHOME)/INCLUDE/awt.hxx 53 66 SEER_arb.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 54 SEER_arb.o: $(ARBHOME)/INCLUDE/ntree.hxx ./seer.hxx 55 SEER_arb.o: ./seer_interface.hxx 67 SEER_arb.o: $(ARBHOME)/INCLUDE/ntree.hxx seer.hxx 68 SEER_arb.o: seer_interface.hxx 69 56 70 SEER_to_seer.o: $(ARBHOME)/INCLUDE/arbdb.h 57 71 SEER_to_seer.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 64 78 SEER_to_seer.o: $(ARBHOME)/INCLUDE/awt.hxx 65 79 SEER_to_seer.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 66 SEER_to_seer.o: $(ARBHOME)/INCLUDE/ntree.hxx ./seer.hxx67 SEER_to_seer.o: ./seer_interface.hxx80 SEER_to_seer.o: $(ARBHOME)/INCLUDE/ntree.hxx seer.hxx 81 SEER_to_seer.o: seer_interface.hxx -
trunk/SEQ_QUALITY/Makefile
r1576 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 3 3 4 4 CPP_OBJECTS = SQ_main.o SQ_functions.o … … 10 10 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 11 11 12 depend: 13 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 12 DEPENDS = $(CPP_OBJECTS:.o=.depend) 13 depends: $(DEPENDS) 14 @cat $(DEPENDS) | grep -v '^#' >>Makefile 15 @rm $(DEPENDS) 16 $(DEPENDS): depend.init 17 depend.init: 18 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 19 .c.depend: 20 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 21 .cxx.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 14 23 15 24 # DO NOT DELETE THIS LINE -- make depend depends on it. 25 26 SQ_main.o: $(ARBHOME)/INCLUDE/arbdb.h 27 SQ_main.o: $(ARBHOME)/INCLUDE/arb_assert.h 28 SQ_main.o: $(ARBHOME)/INCLUDE/ad_prot.h 29 SQ_main.o: $(ARBHOME)/INCLUDE/arbdbt.h 30 SQ_main.o: $(ARBHOME)/INCLUDE/ad_t_prot.h seq_quality.h SQ_functions.h 31 32 SQ_functions.o: $(ARBHOME)/INCLUDE/arbdb.h 33 SQ_functions.o: $(ARBHOME)/INCLUDE/arb_assert.h 34 SQ_functions.o: $(ARBHOME)/INCLUDE/ad_prot.h 35 SQ_functions.o: $(ARBHOME)/INCLUDE/arbdbt.h 36 SQ_functions.o: $(ARBHOME)/INCLUDE/ad_t_prot.h -
trunk/SERVERCNTRL/Makefile
r83 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 .SUFFIXES: .o .c .cxx 2 .SUFFIXES: .o .c .cxx .depend 3 3 OBJECTS = servercntrl.o 4 4 $(MAIN): $(OBJECTS) … … 6 6 .c.o: 7 7 $(ACC) $(cflags) -c $< $(AINCLUDES) 8 .cxx.o: 8 .cxx.o: 9 9 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 10 proto: 11 11 rm -f servercntrl_prototypes.h 12 12 ../MAKEBIN/aisc_mkpt -C $(OBJECTS:.o=.c) >servercntrl_prototypes.h 13 depend: 14 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx) 13 14 DEPENDS = $(OBJECTS:.o=.depend) 15 depends: $(DEPENDS) 16 @cat $(DEPENDS) | grep -v '^#' >>Makefile 17 @rm $(DEPENDS) 18 $(DEPENDS): depend.init 19 depend.init: 20 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 21 .c.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 .cxx.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 25 15 26 # DO NOT DELETE THIS LINE -- make depend depends on it. 27 28 servercntrl.o: $(ARBHOME)/INCLUDE/client_privat.h 29 servercntrl.o: $(ARBHOME)/INCLUDE/client.h 30 servercntrl.o: $(ARBHOME)/INCLUDE/arbdb.h 31 servercntrl.o: $(ARBHOME)/INCLUDE/arb_assert.h 32 servercntrl.o: $(ARBHOME)/INCLUDE/ad_prot.h servercntrl.h -
trunk/STAT/Makefile
r887 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 CPP_OBJECTS = ST_quality.o ST_ml.o ST_window.o … … 8 8 $(AR) $(MAIN) $(CPP_OBJECTS) 9 9 10 .cxx.o: 10 .cxx.o: 11 11 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 12 12 13 depend: 14 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 15 16 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 17 24 18 25 # DO NOT DELETE THIS LINE -- make depend depends on it. … … 29 36 ST_quality.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 30 37 ST_quality.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 31 ST_quality.o: $(ARBHOME)/INCLUDE/awt_csp.hxx st_ml.hxx 32 ST_quality.o: st_window.hxx st_quality.hxx 38 ST_quality.o: $(ARBHOME)/INCLUDE/awt_csp.hxx st_ml.hxx st_window.hxx 39 ST_quality.o: st_quality.hxx 40 33 41 ST_ml.o: $(ARBHOME)/INCLUDE/arbdb.h 34 42 ST_ml.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 40 48 ST_ml.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 41 49 ST_ml.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 50 ST_ml.o: $(ARBHOME)/INCLUDE/aw_root.hxx 42 51 ST_ml.o: $(ARBHOME)/INCLUDE/awt_csp.hxx st_ml.hxx 52 43 53 ST_window.o: $(ARBHOME)/INCLUDE/arbdb.h 44 54 ST_window.o: $(ARBHOME)/INCLUDE/arb_assert.h … … 54 64 ST_window.o: $(ARBHOME)/INCLUDE/awt_pro_a_nucs.hxx 55 65 ST_window.o: $(ARBHOME)/INCLUDE/aw_color_groups.hxx 56 ST_window.o: $(ARBHOME)/INCLUDE/awt_csp.hxx st_window.hxx 57 ST_window.o: st_ ml.hxx st_quality.hxx66 ST_window.o: $(ARBHOME)/INCLUDE/awt_csp.hxx st_window.hxx st_ml.hxx 67 ST_window.o: st_quality.hxx -
trunk/TEST/Makefile
r887 r1617 1 2 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 3 .SUFFIXES: .o .cxx 2 .SUFFIXES: .o .cxx .depend 4 3 5 4 CPP_OBJECTS = D_main.o D_classes.o D_awt_graphic_designer.o 6 5 7 8 .cxx.o: 6 .cxx.o: 9 7 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 10 8 … … 13 11 $(AR) $(MAIN) $(CPP_OBJECTS) 14 12 15 depend: 16 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 17 25 # DO NOT DELETE THIS LINE -- make depend depends on it. 18 26 … … 26 34 D_main.o: $(ARBHOME)/INCLUDE/awt_canvas.hxx 27 35 D_main.o: $(ARBHOME)/INCLUDE/aw_preset.hxx 28 D_main.o: $(ARBHOME)/INCLUDE/awt_preset.hxx d_classes.hxx 29 D_main.o: d_main.hxx d_awt_graphic_designer.hxx 30 D_classes.o: d_classes.hxx 36 D_main.o: $(ARBHOME)/INCLUDE/awt_preset.hxx d_classes.hxx d_main.hxx 37 D_main.o: d_awt_graphic_designer.hxx 38 39 D_classes.o: d_classes.hxx 40 31 41 D_awt_graphic_designer.o: $(ARBHOME)/INCLUDE/arbdb.h 32 42 D_awt_graphic_designer.o: $(ARBHOME)/INCLUDE/arb_assert.h -
trunk/TOOLS/Makefile
r887 r1617 3 3 4 4 #LIB2 = $(LIBPATH) -lARBDB $(SYSLIBS) $(CCPLIBS) -lCrun 5 LIB2 = $(LIBPATH) -lARBDB $(SYSLIBS) $(CCPLIBS) 5 LIB2 = $(LIBPATH) -lARBDB $(SYSLIBS) $(CCPLIBS) 6 6 7 .SUFFIXES: .o .c .cxx 7 .SUFFIXES: .o .c .cxx .depend 8 8 9 9 OBJECT = \ … … 31 31 $(CPP) $(cflags) -o $@ $< $(CPPINCLUDES) $(LIB2) 32 32 33 depend: 34 $(MAKEDEPEND) -o '' -p $(ARBHOME)/bin/ $(MAKEDEPENDINC) $(OBJECT:.o=.c*) 33 DEPENDS = $(OBJECT:.o=.depend) 34 depends: $(DEPENDS) 35 @cat $(DEPENDS) | grep -v '^#' >>Makefile 36 @rm $(DEPENDS) 37 $(DEPENDS): depend.init 38 depend.init: 39 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 40 .c.depend: 41 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 42 .cxx.depend: 43 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 35 44 36 45 # DO NOT DELETE 37 46 38 $(ARBHOME)/bin/arb_a2ps: 39 $(ARBHOME)/bin/arb_a2ps: 40 $(ARBHOME)/bin/arb_a2ps: 41 $(ARBHOME)/bin/arb_a2ps: 42 $(ARBHOME)/bin/arb_a2ps: 43 $(ARBHOME)/bin/arb_a2ps: 44 $(ARBHOME)/bin/arb_a2ps: 45 $(ARBHOME)/bin/arb_a2ps: 46 $(ARBHOME)/bin/arb_a2ps: 47 $(ARBHOME)/bin/arb_a2ps: 48 $(ARBHOME)/bin/arb_a2ps: 49 $(ARBHOME)/bin/arb_a2ps: 50 $(ARBHOME)/bin/arb_a2ps: 51 $(ARBHOME)/bin/arb_a2ps: 52 $(ARBHOME)/bin/arb_a2ps: 53 $(ARBHOME)/bin/arb_a2ps: 54 $(ARBHOME)/bin/arb_a2ps: 55 $(ARBHOME)/bin/arb_a2ps: 56 $(ARBHOME)/bin/arb_a2ps: 57 $(ARBHOME)/bin/arb_a2ps: 58 $(ARBHOME)/bin/arb_a2ps: 59 $(ARBHOME)/bin/arb_a2ps: 60 $(ARBHOME)/bin/arb_a2ps: 61 $(ARBHOME)/bin/arb_a2ps: 62 $(ARBHOME)/bin/arb_a2ps: 63 $(ARBHOME)/bin/arb_primer: 64 $(ARBHOME)/bin/arb_primer: 65 $(ARBHOME)/bin/arb_primer: 66 $(ARBHOME)/bin/arb_primer: 67 $(ARBHOME)/bin/arb_primer: 68 $(ARBHOME)/bin/arb_primer: 69 $(ARBHOME)/bin/arb_primer: 70 $(ARBHOME)/bin/arb_primer: 71 $(ARBHOME)/bin/arb_primer: 72 $(ARBHOME)/bin/arb_primer: 73 $(ARBHOME)/bin/arb_primer: 74 $(ARBHOME)/bin/arb_primer: 75 $(ARBHOME)/bin/arb_primer: 76 $(ARBHOME)/bin/arb_primer: 77 $(ARBHOME)/bin/arb_primer: 78 $(ARBHOME)/bin/arb_primer: $(ARBHOME)/INCLUDE/arbdb.h 79 $(ARBHOME)/bin/arb_primer: $(ARBHOME)/INCLUDE/arb_assert.h 80 $(ARBHOME)/bin/arb_primer: $(ARBHOME)/INCLUDE/ad_prot.h 81 $(ARBHOME)/bin/arb_primer: $(ARBHOME)/INCLUDE/arbdbt.h 82 $(ARBHOME)/bin/arb_primer: $(ARBHOME)/INCLUDE/ad_t_prot.h 83 $(ARBHOME)/bin/arb_swap_rnastr: 84 $(ARBHOME)/bin/arb_swap_rnastr: 85 $(ARBHOME)/bin/arb_swap_rnastr: 86 $(ARBHOME)/bin/arb_swap_rnastr: 87 $(ARBHOME)/bin/arb_swap_rnastr: 88 $(ARBHOME)/bin/arb_swap_rnastr: 89 $(ARBHOME)/bin/arb_swap_rnastr: 90 $(ARBHOME)/bin/arb_swap_rnastr: 91 $(ARBHOME)/bin/arb_swap_rnastr: 92 $(ARBHOME)/bin/arb_swap_rnastr: 93 $(ARBHOME)/bin/arb_swap_rnastr: 94 $(ARBHOME)/bin/arb_swap_rnastr: 95 $(ARBHOME)/bin/arb_swap_rnastr: 96 $(ARBHOME)/bin/arb_swap_rnastr: 97 $(ARBHOME)/bin/arb_swap_rnastr: 98 $(ARBHOME)/bin/arb_swap_rnastr: $(ARBHOME)/INCLUDE/arbdb.h 99 $(ARBHOME)/bin/arb_swap_rnastr: $(ARBHOME)/INCLUDE/arb_assert.h 100 $(ARBHOME)/bin/arb_swap_rnastr: $(ARBHOME)/INCLUDE/ad_prot.h 101 $(ARBHOME)/bin/arb_swap_rnastr: $(ARBHOME)/INCLUDE/arbdbt.h 102 $(ARBHOME)/bin/arb_swap_rnastr: $(ARBHOME)/INCLUDE/ad_t_prot.h 103 $(ARBHOME)/bin/arb_2_ascii: 104 $(ARBHOME)/bin/arb_2_ascii: 105 $(ARBHOME)/bin/arb_2_ascii: 106 $(ARBHOME)/bin/arb_2_ascii: 107 $(ARBHOME)/bin/arb_2_ascii: 108 $(ARBHOME)/bin/arb_2_ascii: 109 $(ARBHOME)/bin/arb_2_ascii: 110 $(ARBHOME)/bin/arb_2_ascii: 111 $(ARBHOME)/bin/arb_2_ascii: 112 $(ARBHOME)/bin/arb_2_ascii: 113 $(ARBHOME)/bin/arb_2_ascii: 114 $(ARBHOME)/bin/arb_2_ascii: 115 $(ARBHOME)/bin/arb_2_ascii: 116 $(ARBHOME)/bin/arb_2_ascii: 117 $(ARBHOME)/bin/arb_2_ascii: $(ARBHOME)/INCLUDE/arbdb.h 118 $(ARBHOME)/bin/arb_2_ascii: $(ARBHOME)/INCLUDE/arb_assert.h 119 $(ARBHOME)/bin/arb_2_ascii: $(ARBHOME)/INCLUDE/ad_prot.h 120 $(ARBHOME)/bin/arb_newick_2_otb: 121 $(ARBHOME)/bin/arb_newick_2_otb: 122 $(ARBHOME)/bin/arb_newick_2_otb: 123 $(ARBHOME)/bin/arb_newick_2_otb: 124 $(ARBHOME)/bin/arb_newick_2_otb: 125 $(ARBHOME)/bin/arb_newick_2_otb: 126 $(ARBHOME)/bin/arb_newick_2_otb: 127 $(ARBHOME)/bin/arb_newick_2_otb: 128 $(ARBHOME)/bin/arb_newick_2_otb: 129 $(ARBHOME)/bin/arb_newick_2_otb: 130 $(ARBHOME)/bin/arb_newick_2_otb: 131 $(ARBHOME)/bin/arb_newick_2_otb: 132 $(ARBHOME)/bin/arb_newick_2_otb: 133 $(ARBHOME)/bin/arb_newick_2_otb: 134 $(ARBHOME)/bin/arb_newick_2_otb: 135 $(ARBHOME)/bin/arb_newick_2_otb: $(ARBHOME)/INCLUDE/arbdb.h 136 $(ARBHOME)/bin/arb_newick_2_otb: $(ARBHOME)/INCLUDE/arb_assert.h 137 $(ARBHOME)/bin/arb_newick_2_otb: $(ARBHOME)/INCLUDE/ad_prot.h 138 $(ARBHOME)/bin/arb_newick_2_otb: $(ARBHOME)/INCLUDE/arbdbt.h 139 $(ARBHOME)/bin/arb_newick_2_otb: $(ARBHOME)/INCLUDE/ad_t_prot.h 140 $(ARBHOME)/bin/arb_newick_2_otb: $(ARBHOME)/INCLUDE/cat_tree.hxx 141 $(ARBHOME)/bin/arb_dnarates: 142 $(ARBHOME)/bin/arb_dnarates: 143 $(ARBHOME)/bin/arb_dnarates: 144 $(ARBHOME)/bin/arb_dnarates: 145 $(ARBHOME)/bin/arb_dnarates: 146 $(ARBHOME)/bin/arb_dnarates: 147 $(ARBHOME)/bin/arb_dnarates: 148 $(ARBHOME)/bin/arb_dnarates: 149 $(ARBHOME)/bin/arb_dnarates: 150 $(ARBHOME)/bin/arb_dnarates: 151 $(ARBHOME)/bin/arb_dnarates: 152 $(ARBHOME)/bin/arb_dnarates: 153 $(ARBHOME)/bin/arb_dnarates: 154 $(ARBHOME)/bin/arb_dnarates: 155 $(ARBHOME)/bin/arb_dnarates: 156 $(ARBHOME)/bin/arb_dnarates: 157 $(ARBHOME)/bin/arb_dnarates: 158 $(ARBHOME)/bin/arb_dnarates: 159 $(ARBHOME)/bin/arb_dnarates: 160 $(ARBHOME)/bin/arb_dnarates: 161 $(ARBHOME)/bin/arb_dnarates: 162 $(ARBHOME)/bin/arb_dnarates: 163 $(ARBHOME)/bin/arb_dnarates: DNAml_rates_1_0.h 164 $(ARBHOME)/bin/arb_dnarates: $(ARBHOME)/INCLUDE/aw_awars.hxx 165 $(ARBHOME)/bin/arb_dnarates: $(ARBHOME)/INCLUDE/arbdb.h 166 $(ARBHOME)/bin/arb_dnarates: $(ARBHOME)/INCLUDE/arb_assert.h 167 $(ARBHOME)/bin/arb_dnarates: $(ARBHOME)/INCLUDE/ad_prot.h 168 $(ARBHOME)/bin/arb_dnarates: $(ARBHOME)/INCLUDE/arbdbt.h 169 $(ARBHOME)/bin/arb_dnarates: $(ARBHOME)/INCLUDE/ad_t_prot.h 170 $(ARBHOME)/bin/arb_2_bin: 171 $(ARBHOME)/bin/arb_2_bin: 172 $(ARBHOME)/bin/arb_2_bin: 173 $(ARBHOME)/bin/arb_2_bin: 174 $(ARBHOME)/bin/arb_2_bin: 175 $(ARBHOME)/bin/arb_2_bin: 176 $(ARBHOME)/bin/arb_2_bin: 177 $(ARBHOME)/bin/arb_2_bin: 178 $(ARBHOME)/bin/arb_2_bin: 179 $(ARBHOME)/bin/arb_2_bin: 180 $(ARBHOME)/bin/arb_2_bin: 181 $(ARBHOME)/bin/arb_2_bin: 182 $(ARBHOME)/bin/arb_2_bin: 183 $(ARBHOME)/bin/arb_2_bin: 184 $(ARBHOME)/bin/arb_2_bin: $(ARBHOME)/INCLUDE/arbdb.h 185 $(ARBHOME)/bin/arb_2_bin: $(ARBHOME)/INCLUDE/arb_assert.h 186 $(ARBHOME)/bin/arb_2_bin: $(ARBHOME)/INCLUDE/ad_prot.h 187 $(ARBHOME)/bin/arb_2_bin: $(ARBHOME)/INCLUDE/arbdbt.h 188 $(ARBHOME)/bin/arb_2_bin: $(ARBHOME)/INCLUDE/ad_t_prot.h 189 $(ARBHOME)/bin/arb_2_bin: 190 $(ARBHOME)/bin/arb_replace: 191 $(ARBHOME)/bin/arb_replace: 192 $(ARBHOME)/bin/arb_replace: 193 $(ARBHOME)/bin/arb_replace: 194 $(ARBHOME)/bin/arb_replace: 195 $(ARBHOME)/bin/arb_replace: 196 $(ARBHOME)/bin/arb_replace: 197 $(ARBHOME)/bin/arb_replace: 198 $(ARBHOME)/bin/arb_replace: 199 $(ARBHOME)/bin/arb_replace: 200 $(ARBHOME)/bin/arb_replace: 201 $(ARBHOME)/bin/arb_replace: 202 $(ARBHOME)/bin/arb_replace: 203 $(ARBHOME)/bin/arb_replace: 204 $(ARBHOME)/bin/arb_replace: 205 $(ARBHOME)/bin/arb_replace: $(ARBHOME)/INCLUDE/arbdb.h 206 $(ARBHOME)/bin/arb_replace: $(ARBHOME)/INCLUDE/arb_assert.h 207 $(ARBHOME)/bin/arb_replace: $(ARBHOME)/INCLUDE/ad_prot.h 208 $(ARBHOME)/bin/arb_read_tree: 209 $(ARBHOME)/bin/arb_read_tree: 210 $(ARBHOME)/bin/arb_read_tree: 211 $(ARBHOME)/bin/arb_read_tree: 212 $(ARBHOME)/bin/arb_read_tree: 213 $(ARBHOME)/bin/arb_read_tree: 214 $(ARBHOME)/bin/arb_read_tree: 215 $(ARBHOME)/bin/arb_read_tree: 216 $(ARBHOME)/bin/arb_read_tree: 217 $(ARBHOME)/bin/arb_read_tree: 218 $(ARBHOME)/bin/arb_read_tree: 219 $(ARBHOME)/bin/arb_read_tree: 220 $(ARBHOME)/bin/arb_read_tree: 221 $(ARBHOME)/bin/arb_read_tree: 222 $(ARBHOME)/bin/arb_read_tree: 223 $(ARBHOME)/bin/arb_read_tree: $(ARBHOME)/INCLUDE/arbdb.h 224 $(ARBHOME)/bin/arb_read_tree: 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$(ARBHOME)/bin/arb_probe: 247 $(ARBHOME)/bin/arb_probe: 248 $(ARBHOME)/bin/arb_probe: 249 $(ARBHOME)/bin/arb_probe: 250 $(ARBHOME)/bin/arb_probe: 251 $(ARBHOME)/bin/arb_probe: 252 $(ARBHOME)/bin/arb_probe: 253 $(ARBHOME)/bin/arb_probe: 254 $(ARBHOME)/bin/arb_probe: 255 $(ARBHOME)/bin/arb_probe: 256 $(ARBHOME)/bin/arb_probe: 257 $(ARBHOME)/bin/arb_probe: 258 $(ARBHOME)/bin/arb_probe: 259 $(ARBHOME)/bin/arb_probe: 260 $(ARBHOME)/bin/arb_probe: 261 $(ARBHOME)/bin/arb_probe: 262 $(ARBHOME)/bin/arb_probe: $(ARBHOME)/INCLUDE/PT_com.h 263 $(ARBHOME)/bin/arb_probe: $(ARBHOME)/INCLUDE/client.h 264 $(ARBHOME)/bin/arb_probe: $(ARBHOME)/INCLUDE/arbdb.h 265 $(ARBHOME)/bin/arb_probe: $(ARBHOME)/INCLUDE/arb_assert.h 266 $(ARBHOME)/bin/arb_probe: $(ARBHOME)/INCLUDE/ad_prot.h 267 $(ARBHOME)/bin/arb_probe: $(ARBHOME)/INCLUDE/servercntrl.h 268 $(ARBHOME)/bin/arb_test: 269 $(ARBHOME)/bin/arb_test: 270 $(ARBHOME)/bin/arb_test: 271 $(ARBHOME)/bin/arb_test: 272 $(ARBHOME)/bin/arb_test: 273 $(ARBHOME)/bin/arb_test: 274 $(ARBHOME)/bin/arb_test: 275 $(ARBHOME)/bin/arb_test: 276 $(ARBHOME)/bin/arb_test: 277 $(ARBHOME)/bin/arb_test: 278 $(ARBHOME)/bin/arb_test: 279 $(ARBHOME)/bin/arb_test: 280 $(ARBHOME)/bin/arb_test: 281 $(ARBHOME)/bin/arb_test: $(ARBHOME)/INCLUDE/arbdb.h 282 $(ARBHOME)/bin/arb_test: $(ARBHOME)/INCLUDE/arb_assert.h 283 $(ARBHOME)/bin/arb_test: $(ARBHOME)/INCLUDE/ad_prot.h 284 $(ARBHOME)/bin/arb_test: 285 $(ARBHOME)/bin/arb_export_rates: 286 $(ARBHOME)/bin/arb_export_rates: 287 $(ARBHOME)/bin/arb_export_rates: 288 $(ARBHOME)/bin/arb_export_rates: 289 $(ARBHOME)/bin/arb_export_rates: 290 $(ARBHOME)/bin/arb_export_rates: 291 $(ARBHOME)/bin/arb_export_rates: 292 $(ARBHOME)/bin/arb_export_rates: 293 $(ARBHOME)/bin/arb_export_rates: 294 $(ARBHOME)/bin/arb_export_rates: 295 $(ARBHOME)/bin/arb_export_rates: 296 $(ARBHOME)/bin/arb_export_rates: 297 $(ARBHOME)/bin/arb_export_rates: 298 $(ARBHOME)/bin/arb_export_rates: 299 $(ARBHOME)/bin/arb_export_rates: 300 $(ARBHOME)/bin/arb_export_rates: $(ARBHOME)/INCLUDE/arbdb.h 301 $(ARBHOME)/bin/arb_export_rates: $(ARBHOME)/INCLUDE/arb_assert.h 302 $(ARBHOME)/bin/arb_export_rates: $(ARBHOME)/INCLUDE/ad_prot.h 303 $(ARBHOME)/bin/arb_export_rates: $(ARBHOME)/INCLUDE/arbdbt.h 304 $(ARBHOME)/bin/arb_export_rates: $(ARBHOME)/INCLUDE/ad_t_prot.h 305 $(ARBHOME)/bin/arb_export_rates: $(ARBHOME)/INCLUDE/aw_awars.hxx 306 $(ARBHOME)/bin/arb_export_tree: 307 $(ARBHOME)/bin/arb_export_tree: 308 $(ARBHOME)/bin/arb_export_tree: 309 $(ARBHOME)/bin/arb_export_tree: 310 $(ARBHOME)/bin/arb_export_tree: 311 $(ARBHOME)/bin/arb_export_tree: 312 $(ARBHOME)/bin/arb_export_tree: 313 $(ARBHOME)/bin/arb_export_tree: 314 $(ARBHOME)/bin/arb_export_tree: 315 $(ARBHOME)/bin/arb_export_tree: 316 $(ARBHOME)/bin/arb_export_tree: 317 $(ARBHOME)/bin/arb_export_tree: 318 $(ARBHOME)/bin/arb_export_tree: 319 $(ARBHOME)/bin/arb_export_tree: 320 $(ARBHOME)/bin/arb_export_tree: 321 $(ARBHOME)/bin/arb_export_tree: $(ARBHOME)/INCLUDE/arbdb.h 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$(ARBHOME)/bin/arb_count_chars: $(ARBHOME)/INCLUDE/arb_assert.h 346 $(ARBHOME)/bin/arb_count_chars: $(ARBHOME)/INCLUDE/ad_prot.h 347 $(ARBHOME)/bin/arb_count_chars: $(ARBHOME)/INCLUDE/arbdbt.h 348 $(ARBHOME)/bin/arb_count_chars: $(ARBHOME)/INCLUDE/ad_t_prot.h 349 $(ARBHOME)/bin/arb_perf_test: 350 $(ARBHOME)/bin/arb_perf_test: 351 $(ARBHOME)/bin/arb_perf_test: 352 $(ARBHOME)/bin/arb_perf_test: 353 $(ARBHOME)/bin/arb_perf_test: 354 $(ARBHOME)/bin/arb_perf_test: 355 $(ARBHOME)/bin/arb_perf_test: 356 $(ARBHOME)/bin/arb_perf_test: 357 $(ARBHOME)/bin/arb_perf_test: 358 $(ARBHOME)/bin/arb_perf_test: 359 $(ARBHOME)/bin/arb_perf_test: 360 $(ARBHOME)/bin/arb_perf_test: 361 $(ARBHOME)/bin/arb_perf_test: 362 $(ARBHOME)/bin/arb_perf_test: 363 $(ARBHOME)/bin/arb_perf_test: 364 $(ARBHOME)/bin/arb_perf_test: 365 $(ARBHOME)/bin/arb_perf_test: 366 $(ARBHOME)/bin/arb_perf_test: 367 $(ARBHOME)/bin/arb_perf_test: 368 $(ARBHOME)/bin/arb_perf_test: 369 $(ARBHOME)/bin/arb_perf_test: $(ARBHOME)/INCLUDE/arbdb.h 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65 arb_newick_2_otb.o: $(ARBHOME)/INCLUDE/ad_prot.h 66 arb_newick_2_otb.o: $(ARBHOME)/INCLUDE/arbdbt.h 67 arb_newick_2_otb.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 68 arb_newick_2_otb.o: $(ARBHOME)/INCLUDE/cat_tree.hxx 69 70 arb_dnarates.o: DNAml_rates_1_0.h $(ARBHOME)/INCLUDE/aw_awars.hxx 71 arb_dnarates.o: $(ARBHOME)/INCLUDE/arbdb.h 72 arb_dnarates.o: $(ARBHOME)/INCLUDE/arb_assert.h 73 arb_dnarates.o: $(ARBHOME)/INCLUDE/ad_prot.h 74 arb_dnarates.o: $(ARBHOME)/INCLUDE/arbdbt.h 75 arb_dnarates.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 76 77 arb_2_bin.o: $(ARBHOME)/INCLUDE/arbdb.h 78 arb_2_bin.o: $(ARBHOME)/INCLUDE/arb_assert.h 79 arb_2_bin.o: $(ARBHOME)/INCLUDE/ad_prot.h 80 arb_2_bin.o: $(ARBHOME)/INCLUDE/arbdbt.h 81 arb_2_bin.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 82 83 arb_replace.o: $(ARBHOME)/INCLUDE/arbdb.h 84 arb_replace.o: $(ARBHOME)/INCLUDE/arb_assert.h 85 arb_replace.o: $(ARBHOME)/INCLUDE/ad_prot.h 86 87 arb_read_tree.o: $(ARBHOME)/INCLUDE/arbdb.h 88 arb_read_tree.o: $(ARBHOME)/INCLUDE/arb_assert.h 89 arb_read_tree.o: $(ARBHOME)/INCLUDE/ad_prot.h 90 arb_read_tree.o: $(ARBHOME)/INCLUDE/arbdbt.h 91 arb_read_tree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 92 93 arb_proto_2_xsub.o: $(ARBHOME)/INCLUDE/arbdb.h 94 arb_proto_2_xsub.o: $(ARBHOME)/INCLUDE/arb_assert.h 95 arb_proto_2_xsub.o: $(ARBHOME)/INCLUDE/ad_prot.h 96 97 arb_probe.o: $(ARBHOME)/INCLUDE/PT_com.h 98 arb_probe.o: $(ARBHOME)/INCLUDE/client.h 99 arb_probe.o: $(ARBHOME)/INCLUDE/arbdb.h 100 arb_probe.o: $(ARBHOME)/INCLUDE/arb_assert.h 101 arb_probe.o: $(ARBHOME)/INCLUDE/ad_prot.h 102 arb_probe.o: $(ARBHOME)/INCLUDE/servercntrl.h 103 104 arb_test.o: $(ARBHOME)/INCLUDE/arbdb.h 105 arb_test.o: $(ARBHOME)/INCLUDE/arb_assert.h 106 arb_test.o: $(ARBHOME)/INCLUDE/ad_prot.h 107 108 arb_export_rates.o: $(ARBHOME)/INCLUDE/arbdb.h 109 arb_export_rates.o: $(ARBHOME)/INCLUDE/arb_assert.h 110 arb_export_rates.o: $(ARBHOME)/INCLUDE/ad_prot.h 111 arb_export_rates.o: $(ARBHOME)/INCLUDE/arbdbt.h 112 arb_export_rates.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 113 arb_export_rates.o: $(ARBHOME)/INCLUDE/aw_awars.hxx 114 115 arb_export_tree.o: $(ARBHOME)/INCLUDE/arbdb.h 116 arb_export_tree.o: $(ARBHOME)/INCLUDE/arb_assert.h 117 arb_export_tree.o: $(ARBHOME)/INCLUDE/ad_prot.h 118 arb_export_tree.o: $(ARBHOME)/INCLUDE/arbdbt.h 119 arb_export_tree.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 120 121 arb_count_chars.o: $(ARBHOME)/INCLUDE/arbdb.h 122 arb_count_chars.o: $(ARBHOME)/INCLUDE/arb_assert.h 123 arb_count_chars.o: $(ARBHOME)/INCLUDE/ad_prot.h 124 arb_count_chars.o: $(ARBHOME)/INCLUDE/arbdbt.h 125 arb_count_chars.o: $(ARBHOME)/INCLUDE/ad_t_prot.h 126 127 arb_perf_test.o: $(ARBHOME)/INCLUDE/arbdb.h 128 arb_perf_test.o: $(ARBHOME)/INCLUDE/arb_assert.h 129 arb_perf_test.o: $(ARBHOME)/INCLUDE/ad_prot.h 130 arb_perf_test.o: $(ARBHOME)/INCLUDE/arbdbt.h 131 arb_perf_test.o: $(ARBHOME)/INCLUDE/ad_t_prot.h -
trunk/TRS/Makefile
r887 r1617 1 1 2 .SUFFIXES: .o .c .cxx 2 .SUFFIXES: .o .c .cxx .depend 3 3 4 4 OBJECTS = trs_hash.o tree_lib.o trs_server.o … … 24 24 $(CPP) $(cflags) -o $@ $< $(CPPINCLUDES) $(LIB2) 25 25 26 depend: 27 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.c*) 26 DEPENDS = $(OBJECTS:.o=.depend) 27 depends: $(DEPENDS) 28 @cat $(DEPENDS) | grep -v '^#' >>Makefile 29 @rm $(DEPENDS) 30 $(DEPENDS): depend.init 31 depend.init: 32 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 33 .c.depend: 34 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 35 .cxx.depend: 36 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 28 37 29 38 # DO NOT DELETE THIS LINE -- make depend depends on it. … … 32 41 tree_lib.o: $(ARBHOME)/INCLUDE/arb_assert.h 33 42 tree_lib.o: $(ARBHOME)/INCLUDE/ad_prot.h 34 tree_lib.o: $(ARBHOME)/INCLUDE/cat_tree.hxx tree_lib.hxx 35 tree_lib.o: trs_proto.h 36 trs_server.o: $(ARBHOME)/INCLUDE/cat_tree.hxx tree_lib.hxx 37 trs_server.o: trs_proto.h 43 tree_lib.o: $(ARBHOME)/INCLUDE/cat_tree.hxx tree_lib.hxx trs_proto.h 44 45 trs_server.o: $(ARBHOME)/INCLUDE/cat_tree.hxx tree_lib.hxx trs_proto.h -
trunk/WETC/Makefile
r866 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 CPP_OBJECTS = WETC_main.o … … 8 8 $(AR) $(MAIN) $(CPP_OBJECTS) 9 9 10 .cxx.o: 10 .cxx.o: 11 11 $(CPP) $(cflags) -c -o $@ $(@:.o=.cxx) $(CPPINCLUDES) 12 12 13 depend: 14 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 15 13 DEPENDS = $(CPP_OBJECTS:.o=.depend) 14 depends: $(DEPENDS) 15 @cat $(DEPENDS) | grep -v '^#' >>Makefile 16 @rm $(DEPENDS) 17 $(DEPENDS): depend.init 18 depend.init: 19 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 20 .c.depend: 21 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 22 .cxx.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 16 24 17 25 # DO NOT DELETE THIS LINE -- make depend depends on it. -
trunk/WINDOW/Makefile
r1068 r1617 1 .SUFFIXES: .o .c .cxx 1 .SUFFIXES: .o .c .cxx .depend 2 2 3 OBJECTS = AW_xkey.o AW_xfont.o AW_nawar.o AW_button.o \ 3 4 AW_at.o AW_print.o AW_window.o \ … … 11 12 .cxx.o: 12 13 $(CCPLIB) $(cflags) -c $< $(CPPINCLUDES) 13 depend: 14 $(MAKEDEPEND) $(MAKEDEPENDINC) $(OBJECTS:.o=.cxx) 14 15 DEPENDS = $(OBJECTS:.o=.depend) 16 depends: $(DEPENDS) 17 @cat $(DEPENDS) | grep -v '^#' >>Makefile 18 @rm $(DEPENDS) 19 $(DEPENDS): depend.init 20 depend.init: 21 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 22 .c.depend: 23 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 24 .cxx.depend: 25 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 26 15 27 # DO NOT DELETE THIS LINE -- make depend depends on it. 16 28 17 AW_xkey.o: aw_keysym.hxx aw_xkey.hxx 18 AW_xkey.o: $(ARBHOME)/INCLUDE/arbdb.h 29 AW_xkey.o: aw_keysym.hxx aw_xkey.hxx $(ARBHOME)/INCLUDE/arbdb.h 19 30 AW_xkey.o: $(ARBHOME)/INCLUDE/arb_assert.h 20 31 AW_xkey.o: $(ARBHOME)/INCLUDE/ad_prot.h 32 21 33 AW_xfont.o: $(ARBHOME)/INCLUDE/arbdb.h 22 34 AW_xfont.o: $(ARBHOME)/INCLUDE/arb_assert.h 23 AW_xfont.o: $(ARBHOME)/INCLUDE/ad_prot.h ./aw_root.hxx aw_device.hxx35 AW_xfont.o: $(ARBHOME)/INCLUDE/ad_prot.h aw_root.hxx aw_device.hxx 24 36 AW_xfont.o: aw_commn.hxx aw_xfont.hxx 25 AW_nawar.o: $(ARBHOME)/INCLUDE/arbdb.h 37 38 AW_nawar.o: $(ARBHOME)/INCLUDE/arbdb.h 26 39 AW_nawar.o: $(ARBHOME)/INCLUDE/arb_assert.h 27 AW_nawar.o: $(ARBHOME)/INCLUDE/ad_prot.h ./aw_root.hxx aw_nawar.hxx 28 AW_button.o: $(ARBHOME)/INCLUDE/arbdb.h 40 AW_nawar.o: $(ARBHOME)/INCLUDE/ad_prot.h aw_root.hxx aw_nawar.hxx 41 42 AW_button.o: $(ARBHOME)/INCLUDE/arbdb.h 29 43 AW_button.o: $(ARBHOME)/INCLUDE/arb_assert.h 30 44 AW_button.o: $(ARBHOME)/INCLUDE/ad_prot.h 31 45 AW_button.o: $(ARBHOME)/INCLUDE/arbdbt.h 32 AW_button.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ./aw_root.hxx aw_at.hxx46 AW_button.o: $(ARBHOME)/INCLUDE/ad_t_prot.h aw_root.hxx aw_at.hxx 33 47 AW_button.o: aw_device.hxx aw_Xm.hxx aw_click.hxx aw_print.hxx aw_size.hxx 34 48 AW_button.o: aw_window.hxx aw_awar.hxx aw_window_Xm.hxx 49 35 50 AW_at.o: $(ARBHOME)/INCLUDE/arbdb.h 36 51 AW_at.o: $(ARBHOME)/INCLUDE/arb_assert.h 37 AW_at.o: $(ARBHOME)/INCLUDE/ad_prot.h ./aw_root.hxx aw_device.hxx52 AW_at.o: $(ARBHOME)/INCLUDE/ad_prot.h aw_root.hxx aw_device.hxx 38 53 AW_at.o: aw_at.hxx aw_window.hxx aw_xfig.hxx 39 AW_print.o: ./aw_root.hxx aw_device.hxx aw_commn.hxx aw_print.hxx 40 AW_window.o: $(ARBHOME)/INCLUDE/arbdb.h 54 55 AW_print.o: aw_root.hxx $(ARBHOME)/INCLUDE/arb_assert.h aw_device.hxx 56 AW_print.o: aw_commn.hxx aw_print.hxx 57 58 AW_window.o: $(ARBHOME)/INCLUDE/arbdb.h 41 59 AW_window.o: $(ARBHOME)/INCLUDE/arb_assert.h 42 60 AW_window.o: $(ARBHOME)/INCLUDE/ad_prot.h 43 61 AW_window.o: $(ARBHOME)/INCLUDE/arbdbt.h 44 AW_window.o: $(ARBHOME)/INCLUDE/ad_t_prot.h ./aw_root.hxx 45 AW_window.o: aw_device.hxx aw_commn.hxx aw_keysym.hxx aw_at.hxx aw_window.hxx 46 AW_window.o: aw_awar.hxx aw_xfig.hxx aw_xfigfont.hxx aw_Xm.hxx aw_click.hxx 47 AW_window.o: aw_size.hxx aw_print.hxx aw_window_Xm.hxx aw_xkey.hxx 48 AW_device.o: ./aw_root.hxx aw_device.hxx 62 AW_window.o: $(ARBHOME)/INCLUDE/ad_t_prot.h aw_root.hxx aw_device.hxx 63 AW_window.o: aw_commn.hxx aw_keysym.hxx aw_at.hxx aw_window.hxx aw_awar.hxx 64 AW_window.o: aw_xfig.hxx aw_xfigfont.hxx aw_Xm.hxx aw_click.hxx aw_size.hxx 65 AW_window.o: aw_print.hxx aw_window_Xm.hxx aw_xkey.hxx 66 67 AW_device.o: aw_root.hxx $(ARBHOME)/INCLUDE/arb_assert.h aw_device.hxx 49 68 AW_device.o: aw_window.hxx aw_commn.hxx 50 AW_Xm.o: ./aw_root.hxx aw_device.hxx aw_commn.hxx aw_Xm.hxx 51 AW_click.o: ./aw_root.hxx aw_device.hxx 52 AW_click.o: aw_commn.hxx aw_click.hxx 53 AW_size.o: ./aw_root.hxx aw_device.hxx aw_commn.hxx aw_size.hxx 54 AW_xfig.o: $(ARBHOME)/INCLUDE/arbdb.h 69 70 AW_Xm.o: aw_root.hxx $(ARBHOME)/INCLUDE/arb_assert.h aw_device.hxx 71 AW_Xm.o: aw_commn.hxx aw_Xm.hxx 72 73 AW_click.o: aw_root.hxx $(ARBHOME)/INCLUDE/arb_assert.h 74 AW_click.o: aw_device.hxx aw_commn.hxx 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trunk/XML/Makefile
r884 r1617 1 1 # INCLUDE und GLOBALS MAIN CC cflags werden von aussen uebergeben 2 2 3 .SUFFIXES: .o .cxx 3 .SUFFIXES: .o .cxx .depend 4 4 5 5 … … 12 12 $(CPP) $(cflags) -c $< $(CPPINCLUDES) 13 13 14 depend: 15 $(MAKEDEPEND) $(MAKEDEPENDINC) $(CPP_OBJECTS:.o=.cxx) 14 DEPENDS = $(CPP_OBJECTS:.o=.depend) 15 depends: $(DEPENDS) 16 @cat $(DEPENDS) | grep -v '^#' >>Makefile 17 @rm $(DEPENDS) 18 $(DEPENDS): depend.init 19 depend.init: 20 $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies 21 .c.depend: 22 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 23 .cxx.depend: 24 $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ 16 25 17 26 # DO NOT DELETE
