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Changeset 6141

Timestamp:

14/08/09 16:29:27 (2 years ago)

Author:

westram

Message:

spellchecked all (phew)

Location:

Files:

: 441 modified

AISC/aisc_commands.c (modified) (view diffs)
AISC_COM/AISC/aisc_com.pa (modified) (view diffs)
AISC_COM/AISC/aisc_debug_globals.pa (modified) (view diffs)
AISC_COM/AISC/aisc_global.pa (modified) (view diffs)
AISC_COM/C/client.c (modified) (view diffs)
AISC_COM/C/client.h (modified) (view diffs)
AISC_COM/C/server.c (modified) (view diffs)
AISC_COM/C/struct_man.c (modified) (view diffs)
AISC_COM/C/struct_man.h (modified) (view diffs)
AISC_MKPTPS/mkptypes.c (modified) (view diffs)
ARBDB/EXAMPLES/rnanames.c (modified) (view diffs)
ARBDB/EXAMPLES/write_all_species.c (modified) (view diffs)
ARBDB/Synchronized_Alignments.txt (modified) (view diffs)
ARBDB/adTest.c (modified) (view diffs)
ARBDB/ad_core.c (modified) (view diffs)
ARBDB/ad_load.c (modified) (view diffs)
ARBDB/ad_lpro.h (modified) (view diffs)
ARBDB/ad_prot.h (modified) (view diffs)
ARBDB/ad_save_load.c (modified) (view diffs)
ARBDB/adali.c (modified) (view diffs)
ARBDB/adcolumns.c (modified) (view diffs)
ARBDB/adcomm.c (modified) (view diffs)
ARBDB/adhash.c (modified) (view diffs)
ARBDB/adindex.c (modified) (view diffs)
ARBDB/adlang1.c (modified) (view diffs)
ARBDB/adlmacros.h (modified) (view diffs)
ARBDB/adlocal.h (modified) (view diffs)
ARBDB/admalloc.c (modified) (view diffs)
ARBDB/admap.c (modified) (view diffs)
ARBDB/admatch.c (modified) (view diffs)
ARBDB/adoptimize.c (modified) (view diffs)
ARBDB/adquery.c (modified) (view diffs)
ARBDB/adseqcompr.c (modified) (view diffs)
ARBDB/adsocket.c (modified) (view diffs)
ARBDB/adstring.c (modified) (view diffs)
ARBDB/adtables.c (modified) (view diffs)
ARBDB/adtools.c (modified) (view diffs)
ARBDB/adtree.c (modified) (view diffs)
ARBDB/adtune.c (modified) (view diffs)
ARBDB/adtune.h (modified) (view diffs)
ARBDB/arb_assert.h (modified) (view diffs)
ARBDB/arbdb.c (modified) (view diffs)
ARBDB/arbdb.h (modified) (view diffs)
ARBDB/arbdb_base.h (modified) (view diffs)
ARBDBPP/admain.cxx (modified) (view diffs)
ARBDBPP/adseq.cxx (modified) (view diffs)
ARBDBPP/adspecies.cxx (modified) (view diffs)
ARBDBPP/arbdb++.hxx (modified) (view diffs)
ARB_GDE/GDE_ParseMenu.cxx (modified) (view diffs)
ARB_GDE/GDE_arbdb_io.cxx (modified) (view diffs)
ARB_GDE/GDE_event.cxx (modified) (view diffs)
ARB_GDE/GDE_menu.h (modified) (view diffs)
AWT/AWT_asciiprint.cxx (modified) (view diffs)
AWT/AWT_canio.cxx (modified) (view diffs)
AWT/AWT_canvas.cxx (modified) (view diffs)
AWT/AWT_codon_table.cxx (modified) (view diffs)
AWT/AWT_csp.cxx (modified) (view diffs)
AWT/AWT_db_browser.cxx (modified) (view diffs)
AWT/AWT_dtree.cxx (modified) (view diffs)
AWT/AWT_file_selection.cxx (modified) (view diffs)
AWT/AWT_hotkeys.cxx (modified) (view diffs)
AWT/AWT_input_mask.cxx (modified) (view diffs)
AWT/AWT_irstree.cxx (modified) (view diffs)
AWT/AWT_nds.cxx (modified) (view diffs)
AWT/AWT_pro_a_nucs.cxx (modified) (view diffs)
AWT/AWT_query_and_functions.cxx (modified) (view diffs)
AWT/AWT_sel_boxes.cxx (modified) (view diffs)
AWT/AWT_seq_dna.cxx (modified) (view diffs)
AWT/AWT_seq_protein.cxx (modified) (view diffs)
AWT/AWT_tree.cxx (modified) (view diffs)
AWT/AWT_tree_cmp.cxx (modified) (view diffs)
AWT/AWT_www.cxx (modified) (view diffs)
AWT/awt.hxx (modified) (view diffs)
AWT/awt_advice.hxx (modified) (view diffs)
AWT/awt_asciiprint.hxx (modified) (view diffs)
AWT/awt_config_manager.hxx (modified) (view diffs)
AWT/awt_dtree.hxx (modified) (view diffs)
AWT/awt_hotkeys.hxx (modified) (view diffs)
AWT/awt_input_mask_internal.hxx (modified) (view diffs)
AWT/awt_item_sel_list.hxx (modified) (view diffs)
AWT/awt_parsimony_defaults.hxx (modified) (view diffs)
AWT/awt_pro_a_nucs.hxx (modified) (view diffs)
AWT/awt_tree.hxx (modified) (view diffs)
AWT/awt_tree_cmp.hxx (modified) (view diffs)
AWTC/AWTC_constructSequence.cxx (modified) (view diffs)
AWTC/awtc_seq_search.hxx (modified) (view diffs)
AWTI/AWTI_export.cxx (modified) (view diffs)
AWTI/AWTI_import.cxx (modified) (view diffs)
CONSENSUS_TREE/CT_dtree.cxx (modified) (view diffs)
CONSENSUS_TREE/CT_hash.cxx (modified) (view diffs)
CONSENSUS_TREE/CT_mem.cxx (modified) (view diffs)
CONSENSUS_TREE/CT_ntree.cxx (modified) (view diffs)
CONSENSUS_TREE/CT_part.cxx (modified) (view diffs)
CONSENSUS_TREE/CT_part.hxx (modified) (view diffs)
CONSENSUS_TREE/CT_rbtree.cxx (modified) (view diffs)
CONVERTALN/alma.c (modified) (view diffs)
CONVERTALN/date.c (modified) (view diffs)
CONVERTALN/embl.c (modified) (view diffs)
CONVERTALN/fconv.c (modified) (view diffs)
CONVERTALN/gcg.c (modified) (view diffs)
CONVERTALN/genbank.c (modified) (view diffs)
CONVERTALN/macke.c (modified) (view diffs)
CONVERTALN/main.c (modified) (view diffs)
CONVERTALN/mg.c (modified) (view diffs)
CONVERTALN/paup.c (modified) (view diffs)
CONVERTALN/phylip.c (modified) (view diffs)
CONVERTALN/printable.c (modified) (view diffs)
CONVERTALN/swissprot.c (modified) (view diffs)
CONVERTALN/util.c (modified) (view diffs)
CONVERTALN/vaxdate.c (modified) (view diffs)
DIST/DI_compress_matrix.cxx (modified) (view diffs)
DIST/DI_matr.cxx (modified) (view diffs)
DIST/DI_mldist.cxx (modified) (view diffs)
DIST/DI_protdist.cxx (modified) (view diffs)
DIST/DI_view_matrix.cxx (modified) (view diffs)
DIST/distanalyse.cxx (modified) (view diffs)
Doxyfile (modified) (view diffs)
EDIT/edit.cxx (modified) (view diffs)
EDIT/edit.hxx (modified) (view diffs)
EDIT/edit_tools.cxx (modified) (view diffs)
EDIT4/ED4_ProteinViewer.cxx (modified) (view diffs)
EDIT4/ED4_base.cxx (modified) (view diffs)
EDIT4/ED4_cursor.cxx (modified) (view diffs)
EDIT4/ED4_edit_string.cxx (modified) (view diffs)
EDIT4/ED4_main.cxx (modified) (view diffs)
EDIT4/ED4_manager.cxx (modified) (view diffs)
EDIT4/ED4_members.cxx (modified) (view diffs)
EDIT4/ED4_no_class.cxx (modified) (view diffs)
EDIT4/ED4_protein_2nd_structure.cxx (modified) (view diffs)
EDIT4/ED4_root.cxx (modified) (view diffs)
EDIT4/ED4_visualizeSAI.cxx (modified) (view diffs)
EDIT4/ed4_ProteinViewer.hxx (modified) (view diffs)
EDIT4/ed4_class.hxx (modified) (view diffs)
EDIT4/ed4_defs.hxx (modified) (view diffs)
EDIT4/ed4_extern.hxx (modified) (view diffs)
EDIT4/ed4_protein_2nd_structure.hxx (modified) (view diffs)
EDIT4/ed4_visualizeSAI.hxx (modified) (view diffs)
EDIT4/graph_aligner_gui.cxx (modified) (view diffs)
GDE/CLUSTALW/clustalw_help (modified) (view diffs)
GDE/MOLPHY/mltree.c (modified) (view diffs)
GDE/RAxML/parsePartitions.c (modified) (view diffs)
GDE/SUPPORT/CAP2.c (modified) (view diffs)
GDEHELP/HELP_PLAIN/CAP2.help (modified) (view diffs)
GENOM/EXP_interface.cxx (modified) (view diffs)
GENOM/GEN_interface.cxx (modified) (view diffs)
GENOM/GEN_map.cxx (modified) (view diffs)
GENOM/GEN_translations.cxx (modified) (view diffs)
GENOM_IMPORT/DBwriter.cxx (modified) (view diffs)
GENOM_IMPORT/DBwriter.h (modified) (view diffs)
GENOM_IMPORT/Importer.cxx (modified) (view diffs)
GENOM_IMPORT/Location.cxx (modified) (view diffs)
GENOM_IMPORT/MetaInfo.cxx (modified) (view diffs)
GENOM_IMPORT/SequenceBuffer.h (modified) (view diffs)
GL/glAW/AW_window_ogl.cxx (modified) (view diffs)
HELP_SOURCE/Makefile (modified) (view diffs)
HELP_SOURCE/arb_help2xml.cxx (modified) (view diffs)
HELP_SOURCE/oldhelp/FAQS.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/Protection.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/ap_stack.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_db.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_edit.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_edit4.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_gde.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_intro.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_pars.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/arb_pars_init.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/awt_csp.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/check_quality.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/checkgcg.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/commands.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/concatenate.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/cons_params.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/consensus_def.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/dist.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/e4.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/e4_block.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/e4_options.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/e4_replace.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/e4_search.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/extended.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/gde.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/gene_info.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/gene_search.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/gene_species.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/gene_species_field_transfer.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/glossary.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/helixsym.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/help.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/importift.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/max_freq.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mg_names.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mg_preserve.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mg_spec_sel_field.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mg_species.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mod_field_list.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mode_angle.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mode_info.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mode_move.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mode_pzoom.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/mp_params.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/multiprobe.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/namesadmin.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/ne_compl.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/ne_pretty.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/ne_replace.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/next_neighbours.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/next_neighbours_common.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/nt_align_select.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pa_bootstrap.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pa_quick.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pa_quick_sel.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pa_ranchlengths.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pars.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/parser.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pd_spec_param.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pfold.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pfold_props.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/phyl.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/phylo.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pos_var_pars.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/primer.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/probedesign.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/probedesignresult.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/probematch.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/prompt/format_alignments.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/proteinViewer.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/pt_server.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/rdp_ift.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/regexpr.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/rename.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/rna3d_dispHelices.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/rna3d_dispMolecule.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/rna3d_general.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/rna3d_mapSeqData.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/saiProbeHelp.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/saveas.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/savedef.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/search_duplicates.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/search_equal_fields.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/searching.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/sec_mode.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/sel_fil.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/sel_spec.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/seq_quality.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/sequence_colors.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/sp_search.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/spaf_delete.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/species_join.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/st_ml.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/tbl_scale.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/tkeep_mrkd.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/tr_type_irs.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/trans_anal.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/translate_dna_2_pro.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/tree2file.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/trm_del.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/undo.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/version.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/visualizeSAI.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/vn_search.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/vn_suggest.hlp (modified) (view diffs)
HELP_SOURCE/oldhelp/write_field_list.hlp (modified) (view diffs)
MERGE/MG_checkfield.cxx (modified) (view diffs)
MERGE/MG_gene_species.cxx (modified) (view diffs)
MERGE/MG_species.cxx (modified) (view diffs)
MULTI_PROBE/SoTl.hxx (modified) (view diffs)
Makefile (modified) (view diffs)
NALIGNER/ali_misc.hxx (modified) (view diffs)
NALIGNER/ali_profile.cxx (modified) (view diffs)
NALIGNER/ali_profile.hxx (modified) (view diffs)
NALIGNER/ali_pt.cxx (modified) (view diffs)
NTREE/AP_consensus.cxx (modified) (view diffs)
NTREE/AP_conservProfile2Gnuplot.cxx (modified) (view diffs)
NTREE/AP_cprofile.cxx (modified) (view diffs)
NTREE/AP_csp_2_gnuplot.cxx (modified) (view diffs)
NTREE/NT_concatenate.cxx (modified) (view diffs)
NTREE/NT_dbrepair.cxx (modified) (view diffs)
NTREE/NT_edconf.cxx (modified) (view diffs)
NTREE/NT_extern.cxx (modified) (view diffs)
NTREE/NT_ins_col.cxx (modified) (view diffs)
NTREE/NT_join.cxx (modified) (view diffs)
NTREE/NT_main.cxx (modified) (view diffs)
NTREE/NT_validNameParser.cxx (modified) (view diffs)
NTREE/ad_spec.cxx (modified) (view diffs)
NTREE/ad_transpro.cxx (modified) (view diffs)
NTREE/ad_trees.cxx (modified) (view diffs)
NTREE/ap_conservProfile2Gnuplot.hxx (modified) (view diffs)
NTREE/ap_pos_var_pars.hxx (modified) (view diffs)
PARSIMONY/AP_buffer.cxx (modified) (view diffs)
PARSIMONY/AP_error.hxx (modified) (view diffs)
PARSIMONY/AP_main.cxx (modified) (view diffs)
PARSIMONY/AP_tree_edge.cxx (modified) (view diffs)
PARSIMONY/AP_tree_nlen.cxx (modified) (view diffs)
PARSIMONY/GA_genetic.cxx (modified) (view diffs)
PARSIMONY/GA_genetic.hxx (modified) (view diffs)
PARSIMONY/GA_main.cxx (modified) (view diffs)
PARSIMONY/PARS_dtree.cxx (modified) (view diffs)
PARSIMONY/PARS_main.cxx (modified) (view diffs)
PARSIMONY/ap_tree_nlen.hxx (modified) (view diffs)
PARSIMONY/parsimony.hxx (modified) (view diffs)
PERL2ARB/DOC.html (modified) (view diffs)
PERL_SCRIPTS/BIOPERL/beautifyNewick.pl (modified) (view diffs)
PGT/config_dialog.cxx (modified) (view diffs)
PGT/file_import.cxx (modified) (view diffs)
PGT/image_dialog.cxx (modified) (view diffs)
PGT/import_dialog.cxx (modified) (view diffs)
PGT/main.cxx (modified) (view diffs)
PGT/plot.cxx (modified) (view diffs)
PHYLO/PH_data.cxx (modified) (view diffs)
PHYLO/PH_display.cxx (modified) (view diffs)
PHYLO/PH_filt.cxx (modified) (view diffs)
PHYLO/PH_main.cxx (modified) (view diffs)
PRIMER_DESIGN/PRD_Design.cxx (modified) (view diffs)
PRIMER_DESIGN/PRD_Design.hxx (modified) (view diffs)
PRIMER_DESIGN/PRD_Item.cxx (modified) (view diffs)
PRIMER_DESIGN/PRD_Item.hxx (modified) (view diffs)
PRIMER_DESIGN/PRD_SearchFIFO.cxx (modified) (view diffs)
PRIMER_DESIGN/PRD_SearchFIFO.hxx (modified) (view diffs)
PRIMER_DESIGN/primer_design.cxx (modified) (view diffs)
PROBE/PT_etc.cxx (modified) (view diffs)
PROBE/PT_family.cxx (modified) (view diffs)
PROBE/PT_main.cxx (modified) (view diffs)
PROBE/PT_match.cxx (modified) (view diffs)
PROBE/PT_new_design.cxx (modified) (view diffs)
PROBE/PT_prefixtree.cxx (modified) (view diffs)
PROBE/probe.h (modified) (view diffs)
PROBE/probe_tree.hxx (modified) (view diffs)
PROBE_COM/PT.aisc (modified) (view diffs)
PROBE_DESIGN/SaiProbeVisualization.cxx (modified) (view diffs)
PROBE_DESIGN/probe_design.cxx (modified) (view diffs)
PROBE_SET/ps_bitmap.hxx (modified) (view diffs)
PROBE_SET/ps_bitset.hxx (modified) (view diffs)
PROBE_SET/ps_candidate.hxx (modified) (view diffs)
PROBE_SET/ps_detect_weak_differences.cxx (modified) (view diffs)
PROBE_SET/ps_find_probes.cxx (modified) (view diffs)
PROBE_SET/ps_pg_tree_functions.cxx (modified) (view diffs)
RNA3D/RNA3D_Global.hxx (modified) (view diffs)
RNA3D/RNA3D_Interface.cxx (modified) (view diffs)
RNA3D/RNA3D_Main.cxx (modified) (view diffs)
RNA3D/RNA3D_OpenGLEngine.cxx (modified) (view diffs)
RNA3D/RNA3D_OpenGLGraphics.cxx (modified) (view diffs)
RNA3D/RNA3D_Renderer.cxx (modified) (view diffs)
RNA3D/RNA3D_StructureData.cxx (modified) (view diffs)
SECEDIT/SEC_graphic.cxx (modified) (view diffs)
SECEDIT/SEC_helix.cxx (modified) (view diffs)
SECEDIT/SEC_layout.cxx (modified) (view diffs)
SECEDIT/SEC_main.cxx (modified) (view diffs)
SECEDIT/SEC_paint.cxx (modified) (view diffs)
SECEDIT/SEC_root.hxx (modified) (view diffs)
SECEDIT/SEC_structure.cxx (modified) (view diffs)
SEQ_QUALITY/SQ_functions.cxx (modified) (view diffs)
SEQ_QUALITY/SQ_functions.h (modified) (view diffs)
SEQ_QUALITY/SQ_main.cxx (modified) (view diffs)
SERVERCNTRL/servercntrl.c (modified) (view diffs)
SH/arb_panic (modified) (view diffs)
SH/arb_raxml (modified) (view diffs)
SH/arb_textedit (modified) (view diffs)
SL/AW_NAME/AW_rename.cxx (modified) (view diffs)
SL/AW_NAME/AW_rename.hxx (modified) (view diffs)
SL/DB_SCANNER/db_scanner.cxx (modified) (view diffs)
SL/DB_SCANNER/db_scanner.hxx (modified) (view diffs)
SL/FAST_ALIGNER/fast_aligner.cxx (modified) (view diffs)
SL/TREE_READ/TreeRead.cxx (modified) (view diffs)
SOURCE_TOOLS/build_info.pl (modified) (view diffs)
SOURCE_TOOLS/fix_depends.pl (modified) (view diffs)
SOURCE_TOOLS/grepx.pl (modified) (view diffs)
SOURCE_TOOLS/postcompile.pl (modified) (view diffs)
SOURCE_TOOLS/profile_annotate.pl (modified) (view diffs)
SOURCE_TOOLS/valgrind2grep (modified) (view diffs)
STAT/ST_ml.cxx (modified) (view diffs)
STAT/ST_quality.cxx (modified) (view diffs)
STAT/st_ml.hxx (modified) (view diffs)
TEMPLATES/arb_debug.h (modified) (view diffs)
TEMPLATES/inline.h (modified) (view diffs)
TEMPLATES/smartptr.h (modified) (view diffs)
TOOLS/arb_a2ps.c (modified) (view diffs)
TOOLS/arb_dnarates.c (modified) (view diffs)
TOOLS/arb_export_rates.cxx (modified) (view diffs)
TOOLS/arb_export_tree.cxx (modified) (view diffs)
TOOLS/arb_gene_probe.cxx (modified) (view diffs)
TOOLS/arb_probe.cxx (modified) (view diffs)
TOOLS/arb_proto_2_xsub.cxx (modified) (view diffs)
TOOLS/arb_replace.cxx (modified) (view diffs)
TOOLS/arb_test.cxx (modified) (view diffs)
TREEGEN/frand.h (modified) (view diffs)
WINDOW/AW_button.cxx (modified) (view diffs)
WINDOW/AW_debug.cxx (modified) (view diffs)
WINDOW/AW_device.cxx (modified) (view diffs)
WINDOW/AW_nawar.cxx (modified) (view diffs)
WINDOW/AW_position.cxx (modified) (view diffs)
WINDOW/AW_question.cxx (modified) (view diffs)
WINDOW/AW_status.cxx (modified) (view diffs)
WINDOW/AW_window.cxx (modified) (view diffs)
WINDOW/AW_xfont.cxx (modified) (view diffs)
WINDOW/AW_xkey.cxx (modified) (view diffs)
WINDOW/aw_awar.hxx (modified) (view diffs)
WINDOW/aw_commn.hxx (modified) (view diffs)
WINDOW/aw_device.hxx (modified) (view diffs)
WINDOW/aw_position.hxx (modified) (view diffs)
WINDOW/aw_question.hxx (modified) (view diffs)
WINDOW/aw_root.hxx (modified) (view diffs)
WINDOW/aw_window.hxx (modified) (view diffs)
WINDOW/aw_window_Xm.hxx (modified) (view diffs)
XML_IMPORT/IMP_TREE/testParser.cxx (modified) (view diffs)
XML_IMPORT/IMP_TREE/xmlParser.cxx (modified) (view diffs)
arb_CHANGES.txt (modified) (view diffs)
arb_INSTALL.txt (modified) (view diffs)
arb_LICENSE.txt (modified) (view diffs)
arb_README.txt (modified) (view diffs)
arb_UBUNTU.txt (modified) (view diffs)
arb_install.sh (modified) (view diffs)
doc/a2ps.README (modified) (view diffs)
etc/files (modified) (view diffs)
lib/pictures/RNA3D_Help.fig (modified) (view diffs)
lib/pictures/ad_ext.fig (modified) (view diffs)
lib/pictures/arb_intro.fig (modified) (view diffs)
lib/pictures/awt/col_statistic.fig (modified) (view diffs)
lib/pictures/awt/parser.fig (modified) (view diffs)
lib/pictures/consensus/max_freq.fig (modified) (view diffs)
lib/pictures/conservProfile2Gnuplot.fig (modified) (view diffs)
lib/pictures/cpro/csp_2_gnuplot.fig (modified) (view diffs)
lib/pictures/di_ge_ma.fig (modified) (view diffs)
lib/pictures/edit4/search.fig (modified) (view diffs)
lib/pictures/gde2item.fig (modified) (view diffs)
lib/pictures/gde3item.fig (modified) (view diffs)
lib/pictures/join_species.fig (modified) (view diffs)
lib/pictures/merge/mg_mergetaggedfield.fig (modified) (view diffs)
lib/pictures/pars/kernlin.fig (modified) (view diffs)
lib/pictures/pd_main.fig (modified) (view diffs)
lib/pictures/seq_quality.fig (modified) (view diffs)
lib/pictures/unused/findcorr/bc_fa.fig (modified) (view diffs)
lib/pictures/unused/findcorr/bc_fat.fig (modified) (view diffs)
lib/pictures/unused/findcorr/bc_verb.fig (modified) (view diffs)
lib/pictures/unused/findcorr/bc_verb2.fig (modified) (view diffs)
lib/pictures/unused/logo.fig (modified) (view diffs)
lib/pictures/visualizeSAI.fig (modified) (view diffs)
ptpan/PTP_main.cxx (modified) (view diffs)
ptpan/ptpan.h (modified) (view diffs)
util/arb_srclst.pl (modified) (view diffs)
util/arb_test_compresssion (modified) (view diffs)

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