Changeset 6141 for trunk/HELP_SOURCE/oldhelp/gde.hlp
- Timestamp:
- 14/08/09 16:29:27 (3 years ago)
- Files:
-
- 1 modified
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trunk/HELP_SOURCE/oldhelp/gde.hlp (modified) (8 diffs)
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trunk/HELP_SOURCE/oldhelp/gde.hlp
r941 r6141 54 54 sequence analysis functions into a common 55 55 environment. The GDE takes care of the user 56 interface issues, and allows the program er to56 interface issues, and allows the programmer to 57 57 concentrate on the analysis itself. Existing programs 58 58 can be tied into the GDE in a matter of hours (or … … 72 72 SECTION What's New for this Release 73 73 74 GDE 2.2 represents a maint ainence release. Several74 GDE 2.2 represents a maintenance release. Several 75 75 small bugs have been fixed, as well as new editing 76 76 features and user interface elements. Also, I have … … 90 90 useful "yanking" feature has been added by Scott 91 91 Ferguson from Exxon Research, and the capability 92 to export the colormap for a seq eunce (see93 appendic ies A/C). Among the bugs fixed in this92 to export the colormap for a sequence (see 93 appendices A/C). Among the bugs fixed in this 94 94 release are: 95 95 … … 111 111 and can be run remotely on any system capable of 112 112 running X Windows Release 4. You should have at 113 least 15 meg of free disk space available. The bina y113 least 15 meg of free disk space available. The binary 114 114 release for SparcStations was compiled under 115 115 SunOS 4.1.2 and Openwindows 3.0. … … 369 369 programs. Programs of the form: 370 370 371 program_name -a1 argument1 -a2 argu ement2 -f inputfile -er errorfile > outputfile371 program_name -a1 argument1 -a2 argument2 -f inputfile -er errorfile > outputfile 372 372 373 373 can be specified in the .GDEmenus file directly. As … … 545 545 Minimum overlap Number of bases required for overlap 546 546 Percent match within overlap Percentage match required in the overlap 547 region before merge is al owwed.547 region before merge is allowed. 548 548 549 549 Comments: … … 614 614 Author: Don Gilbert 615 615 616 Parameters: Many, but can easily be run in interactive m doe.616 Parameters: Many, but can easily be run in interactive mode. 617 617 618 618 Comments: … … 621 621 The latest versionsupports over a dozen different file formats, as 622 622 well as formating capabilities for publication. GDE makes of Readseq 623 for importing and exporting seq euences as well as a filtering tool to623 for importing and exporting sequences as well as a filtering tool to 624 624 some external functions. 625 625
