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Timestamp:
14/08/09 16:29:27 (3 years ago)
Author:
westram
Message:
  • spellchecked all (phew)
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1 modified

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  • trunk/HELP_SOURCE/oldhelp/gde.hlp

    r941 r6141  
    5454        sequence analysis functions into a common 
    5555        environment. The GDE takes care of the user 
    56         interface issues, and allows the programer to 
     56        interface issues, and allows the programmer to 
    5757        concentrate on the analysis itself. Existing programs 
    5858        can be tied into the GDE in a matter of hours (or 
     
    7272SECTION What's New for this Release 
    7373 
    74         GDE 2.2 represents a maintainence release. Several 
     74        GDE 2.2 represents a maintenance release. Several 
    7575        small bugs have been fixed, as well as new editing 
    7676        features and user interface elements. Also, I have 
     
    9090        useful "yanking" feature has been added by Scott 
    9191        Ferguson from Exxon Research, and the capability 
    92         to export the colormap for a seqeunce (see 
    93         appendicies A/C). Among the bugs fixed in this 
     92        to export the colormap for a sequence (see 
     93        appendices A/C). Among the bugs fixed in this 
    9494        release are: 
    9595 
     
    111111        and can be run remotely on any system capable of 
    112112        running X Windows Release 4. You should have at 
    113         least 15 meg of free disk space available. The binay 
     113        least 15 meg of free disk space available. The binary 
    114114        release for SparcStations was compiled under 
    115115        SunOS 4.1.2 and Openwindows 3.0. 
     
    369369        programs. Programs of the form: 
    370370 
    371                 program_name -a1 argument1 -a2 arguement2 -f inputfile -er errorfile > outputfile 
     371                program_name -a1 argument1 -a2 argument2 -f inputfile -er errorfile > outputfile 
    372372 
    373373        can be specified in the .GDEmenus file directly. As 
     
    545545                        Minimum overlap                 Number of bases required for overlap 
    546546                        Percent match within overlap    Percentage match required in the overlap 
    547                                                         region before merge is alowwed. 
     547                                                        region before merge is allowed. 
    548548 
    549549                Comments: 
     
    614614        Author: Don Gilbert 
    615615 
    616         Parameters: Many, but can easily be run in interactive mdoe. 
     616        Parameters: Many, but can easily be run in interactive mode. 
    617617 
    618618        Comments: 
     
    621621                        The latest versionsupports over a dozen different file formats, as 
    622622                        well as formating capabilities for publication. GDE makes of Readseq 
    623                         for importing and exporting seqeuences as well as a filtering tool to 
     623                        for importing and exporting sequences as well as a filtering tool to 
    624624                        some external functions. 
    625625