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Timestamp:
14/08/09 16:29:27 (3 years ago)
Author:
westram
Message:
  • spellchecked all (phew)
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1 modified

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  • trunk/HELP_SOURCE/oldhelp/phylo.hlp

    r4350 r6141  
    1111TITLE           ARB_PHYLO - Create filters by base frequency 
    1212 
    13 OCCURRENCE      ARB_NT/SAI/Create Filter/by Base Frequncy 
     13OCCURRENCE      ARB_NT/SAI/Create Filter/by Base Frequency 
    1414 
    1515DESCRIPTION     Calculate base frequencies and/or a base frequency filter. 
     
    5252                              The corresponding characters are counted like regular sequence characters, 
    5353                              but never interpreted as "being the most homologous character". 
    54                               Compared with 'dont count' it will result in lower base frequencies, cause 
     54                              Compared with 'don't count' it will result in lower base frequencies, cause 
    5555                              the overall number of characters occurring per column will be higher. 
    5656 
     
    8585                   - all alignment columns 
    8686                   - similarity 0 to 100 
    87                    - both gaps: 'dont count (ignore)' 
     87                   - both gaps: 'don't count (ignore)' 
    8888                   - ambiguity codes: 'treat as regular character' 
    8989                   - lowercase chars: 'treat as uppercase char'