Changeset 6141 for trunk/HELP_SOURCE/oldhelp/visualizeSAI.hlp

Timestamp:

14/08/09 16:29:27 (3 years ago)

Author:

westram

Message:

• spellchecked all (phew)

Files:

• trunk/HELP_SOURCE/oldhelp/visualizeSAI.hlp (modified) (3 diffs)

trunk/HELP_SOURCE/oldhelp/visualizeSAI.hlp

@@ -9 +9 @@
 
 #************* Title of helpfile !! and start of real helpfile ********
-TITLE           Visualisation of Sequence Associated Information (SAI) in Primary and Secondary Editors.
+TITLE           Visualization of Sequence Associated Information (SAI) in Primary and Secondary Editors.
 
 OCCURRENCE      In Sequence Editors - Primary Editor (ARB_EDIT4) and Secondary Editor
@@ -15 +15 @@
 DESCRIPTION
 
-            This function can be used to Visualise Sequence Associated Informations (SAI)
+            This function can be used to Visualize Sequence Associated Information (SAI)
             in the Primary Structure and Secondary Structure Editor windows.
             
-            Steps to use VISUALISATION of SAIs in Primary Structure Editor:
+            Steps to use VISUALIZATION of SAIs in Primary Structure Editor:
 
-               1. Select SAI to be visualised from the SAI list (all SAIs present in the
+               1. Select SAI to be visualized from the SAI list (all SAIs present in the
                ARB Database).
 
@@ -34 +34 @@
                COLORS AND FONTS menu.
 
-               5. Then, choose the visualisation options. You can opt to visualise only
+               5. Then, choose the visualization options. You can opt to visualize only
                MARKED species or ALL species in the primary editor.
 
-               6. Finally, be sure to check ENABLE VISUALISATION check box.
+               6. Finally, be sure to check ENABLE VISUALIZATION check box.
 
             If Color Translation Tables were defined for each existing/displayed SAIs in
             the Primary Editor, one can navigate through different SAIs in the editor and
-            visulaize the same instantly. To enable this feature, AUTOSELECT SAI should be
+            visualize the same instantly. To enable this feature, AUTOSELECT SAI should be
             enabled in Visualize SAI window (VIEW->VISUALIZE SAIs menu).
 
-            Sequence Associated Information can also be visualised in Secondary Structure
+            Sequence Associated Information can also be visualized in Secondary Structure
             Editor.
     
-               To Visualise SAI in Secondary Structure editor window - Go to PROPERTIES
-               menu, click on CHANGE DISPLAY sub-menu and select Visulaise SAI check box.
+               To Visualize SAI in Secondary Structure editor window - Go to PROPERTIES
+               menu, click on CHANGE DISPLAY sub-menu and select the 'Visualize SAI' check
+               box.
 
                You can also change the colors used to display SAIs by going to
                PROPERTIES->CHANGE COLORS AND FONTS menu in the Secondary Editor Window.
 
-NOTES       If SAIs are to be visualised in Secondary Structure Editor window, one should
-            select SAI, define CTT and check ENABLE VISUALISATION check box in Primary
-            structure editor window using VISUALISE SAI function (under VIEW menu in
+NOTES       If SAIs are to be visualized in Secondary Structure Editor window, one should
+            select SAI, define CTT and check ENABLE VISUALIZATION check box in Primary
+            structure editor window using VISUALIZE SAI function (under VIEW menu in
             PRIMARY EDITOR).
             
-            Inorder to retain the settings of CTT and associated SAIs, one should save the
-            properties by going to PROPERTIES->SAVE PROPERTIES menu in primary
-            editor. Plese note that the CTT definitions are stored in the local file
+            In order to retain the settings of CTT and associated SAIs, one should save
+            the properties by going to PROPERTIES->SAVE PROPERTIES menu in primary
+            editor. Please note that the CTT definitions are stored in the local file
             (.arb_prop/edit4.arb) and deleting or modifying this file will lose all the
             information about CTT definitions used for visualization of SAIs for future