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Rev Chgset Date Author Log Message
(edit) @8362 [8362] 30 hours westram * sequence color mapping - fixed broken window layout - increased …
(edit) @8354 [8354] 3 days westram * removed extra sync in ED4_resize_cb (syncronize slider positions between …
(edit) @8353 [8353] 3 days westram * EDIT4 scrolling - EDIT4 uses two interleaved mechanisms to control …
(edit) @8350 [8350] 4 days westram * moved calculation of scrolled area (considering scrollbar indents) into …
(edit) @8349 [8349] 6 days westram * scrollbar code slightly refactored
(edit) @8348 [8348] 6 days westram * fixed wrong comments
(edit) @8347 [8347] 6 days westram * scrolling down completely and then increasing the height of the edit …
(edit) @8346 [8346] 7 days westram * expect context in ED4_root::special_window_refresh * provide context …
(edit) @8345 [8345] 9 days westram * cleaned up resize requests - renamed to match refresh requests - …
(edit) @8344 [8344] 9 days westram * missing context when NDS changed - fixed by requesting refresh (and …
(edit) @8343 [8343] 10 days westram * minor type fixes
(edit) @8342 [8342] 10 days westram * replaced ED4_refresh_window by ED4_request_full_refresh - some …
(edit) @8341 [8341] 10 days westram * set_refresh - renamed to request_refresh - calls …
(edit) @8340 [8340] 11 days westram * changed refresh behavior - refresh_all_windows * call via …
(edit) @8339 [8339] 11 days westram * display ORF terminals at cursor of MOST RECENT window - only a hack …
(edit) @8338 [8338] 12 days westram * do group-size calculation via update flags (first request; recalc during …
(edit) @8337 [8337] 2 weeks westram * set_properties - inlined - renamed -> set_property - …
(edit) @8336 [8336] 2 weeks westram * disabled assertion failing for some fonts
(edit) @8335 [8335] 2 weeks westram * missing context when changing HELIX-inputfield
(edit) @8334 [8334] 2 weeks westram * DRYed test for hidden terminals
(edit) @8333 [8333] 2 weeks westram * when moving cursor vertically, scroll display if target terminal is only …
(edit) @8332 [8332] 2 weeks westram * reloc get_upper_lower_cursor_pos to get rid of prototype
(edit) @8331 [8331] 2 weeks westram * get_upper_lower_cursor_pos - no longer a member of ED4_cursor - …
(edit) @8330 [8330] 3 weeks westram * DRYed get_area_level
(edit) @8329 [8329] 3 weeks westram * only call get_upper_lower_cursor_pos with screen coordinates when cursor …
(edit) @8307 [8307] 7 weeks westram * missing context in ED4_remote_set_cursor_cb * NULL-deref in …
(edit) @8306 [8306] 8 weeks westram * fixed '(re)load config' - explicitely remove all callbacks before …
(edit) @8305 [8305] 8 weeks westram * create species (all three) were missing context
(edit) @8304 [8304] 8 weeks westram * removed ED4_species_container_changed_cb - that callback triggered …
(edit) @8303 [8303] 8 weeks westram * moved variables handling selected block into new class ED4_block
(edit) @8301 [8301] 8 weeks westram * fixed some realigner bugs - when species did not contain …
(edit) @8299 [8299] 8 weeks westram * when creating a 2nd window with identical ID (e.g. done for 2nd editor …
(edit) @8298 [8298] 8 weeks westram * syncronize mode in all edit windows
(edit) @8296 [8296] 2 months westram * added special class ED4_WinContextFree - denies access to global …
(edit) @8295 [8295] 2 months westram * fixed ED4_compression_changed_cb - now updates all windows when …
(edit) @8294 [8294] 2 months eissler PTPan: removed some compiler warnings
(edit) @8293 [8293] 2 months westram * each cursor remembers the window where its located - removed now …
(edit) @8290 [8290] 2 months westram * minor changes
(edit) @8289 [8289] 2 months westram * missing context in ED4_set_iupac (edit IUPAC field) * dump backtrace …
(edit) @8288 [8288] 2 months westram - removed some useless virtualization
(edit) @8287 [8287] 2 months westram - sync from trunk (unity/suse12.1)
(edit) @8286 [8286] 2 months westram * cleaned ED4-object-deletion (what a mess) - rewrote …
(edit) @8282 [8282] 2 months eissler PTPan: solved issue with including reverse-complement in ProbeMatch?
(edit) @8281 [8281] 2 months eissler PTPan update to current version
(edit) @8277 [8277] 2 months westram * pass ED4_window to ED4_search_cb to ensure the search is performed in …
(edit) @8276 [8276] 2 months westram * denglish (actual->current)
(edit) @8275 [8275] 2 months westram * define window-contexts by instanciating context-objects - …
(edit) @8274 [8274] 2 months westram - sync from trunk
(edit) @8239 [8239] 2 months westram * short->bool
(edit) @8238 [8238] 2 months westram * moved world<->win transformation into ED4_folding_line
(edit) @8237 [8237] 2 months westram * ED4_folding_line - reduced to needed minimum: position, dimension, …
(edit) @8236 [8236] 2 months westram * ED4_folding_line (code from hell) - added ctor/dtor (fixing leak) …
(edit) @8235 [8235] 2 months eissler PTPan: Improved hardware detection by using hwloc-library (optional)
(edit) @8232 [8232] 3 months westram * removed 'length' from ED4_folding_line (all are of infinite length now)
(edit) @8231 [8231] 3 months westram * reactivated tests removed in [8228], but - all folding lines with …
(edit) @8230 [8230] 3 months westram * ED4_scrolled_rectangle - made all members private - use …
(edit) @8228 [8228] 3 months westram * the whole concept of multiple folding lines is broken by design - no …
(edit) @8227 [8227] 3 months westram * extracted ED4_foldable from ED4_window - enables separate tests …
(edit) @8226 [8226] 3 months westram * only explain broken/wanted expectations if warning was shown * added …
(edit) @8224 [8224] 3 months epruesse merge from trunk (disabled some pt server patches)
(edit) @8223 [8223] 3 months westram - merged [8220] from trunk
(edit) @8222 [8222] 3 months westram - fixed NDEBUG compilation broken by [8138]
(edit) @8221 [8221] 3 months westram - optionally keep preprocesser output
(edit) @8219 [8219] 3 months westram * rewrote unit test code - uses expectations (inspired by hamcrest) …
(edit) @8218 [8218] 3 months westram - increase graph depth to 3 - exclude HEADERLIBS
(edit) @8215 [8215] 3 months westram - guard truncated probe match against misunderstandings - increase match …
(edit) @8214 [8214] 3 months eissler PTPan integration: Fixed wrong hardware thread determination
(edit) @8213 [8213] 3 months westram * update
(edit) @8211 [8211] 3 months westram
(edit) @8210 [8210] 3 months westram - drop suse version
(edit) @8209 [8209] 3 months westram Auto version upgrade to 5.3 by devel@…
(edit) @8208 [8208] 3 months westram * arb 5.3 changes
(edit) @8207 [8207] 3 months westram - 10.04
(edit) @8206 [8206] 3 months westram - added BRANCH_STATE
(edit) @8204 [8204] 3 months westram merge from trunk part of [7900] - fixed target 'savetest' - perl2arb …
(edit) @8203 [8203] 3 months westram - removed molphy (protml)
(edit) @8202 [8202] 3 months westram * world_to_win_coords / win_to_world_coords - aligned to each other …
(edit) @8201 [8201] 3 months westram * world_to_win_coords / win_to_world_coords - moved into ED4_window
(edit) @8200 [8200] 3 months westram * world_to_win_coords / win_to_world_coords - removed useless …
(edit) @8199 [8199] 3 months westram - missing transaction
(edit) @8198 [8198] 3 months westram * avoid config managers from callallcallbacks
(edit) @8197 [8197] 3 months westram - some fixes for un-/over-handled errors
(edit) @8196 [8196] 3 months westram * callallcallbacks - allow repeated calls for all orders - avoid …
(edit) @8195 [8195] 3 months westram * track most-recently-used edit-window
(edit) @8194 [8194] 3 months westram * added AWT_install_postcb_cb - installs a callback which is called …
(edit) @8193 [8193] 3 months westram * wrapped access to current device/aww/ed4w
(edit) @8192 [8192] 3 months westram * ED4_root - replaced initialization via memset with explicit …
(edit) @8191 [8191] 3 months westram * removed unused default parameter 'only_text' from ED4_terminal::draw * …
(edit) @8190 [8190] 3 months westram * spelling (intervall -> interval)
(edit) @8189 [8189] 3 months westram * use PosRange? in build_probe_match_string
(edit) @8188 [8188] 3 months westram * cache sequence length in ED4_orf_terminal * cleanup
(edit) @8187 [8187] 3 months westram * use PosRange? - to handle selection (aka "block") - for update …
(edit) @8186 [8186] 3 months eissler PTPan solved issue with older boost versions caused by missing …
(edit) @8185 [8185] 3 months westram * added PosRange::contains()
(edit) @8184 [8184] 3 months westram * PosRange? - cleaned up attributes - replaced all is_restricted by …
(edit) @8183 [8183] 3 months westram * use Range in - AlignParams - readCompactedSequence() - …
(edit) @8182 [8182] 3 months westram * added test for UnalignedBasesList - documenting wrong behavior …
(edit) @8181 [8181] 3 months westram * changed internal representation of empty and non-explicit ranges …
(edit) @8180 [8180] 3 months westram * added intersection for PosRanges
(edit) @8179 [8179] 3 months eissler PTPan fixed an error in ProbeDesign process leading to wrong candidates …
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