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Rev Chgset Date Author Log Message
(edit) @6589 [6589] 5 months westram - backport [6588]
(edit) @6521 [6521] 6 months westram * added COMPILE_ASSERT * assert correct pointersizes for PT-server
(edit) @6519 [6519] 6 months westram - quick save errors were dropped (no quicksave happened)
(edit) @6487 [6487] 6 months westram - backport [6486]
(edit) @6419 [6419] 7 months westram - backport [6418]
(edit) @6358 [6358] 8 months westram - backport [6353], [6354] and [6357]
(edit) @6351 [6351] 8 months westram - backport [6350]
(edit) @6341 [6341] 8 months westram - backport [6340]
(edit) @6339 [6339] 8 months westram - backport [6338]
(edit) @6289 [6289] 9 months westram - backport [6288]
(edit) @6287 [6287] 9 months westram - backport [6285] [6286]
(edit) @6278 [6278] 10 months westram - changed default in-cluster-distance to 3%
(edit) @6276 [6276] 10 months westram - assert no callback guard fails (DEVEL_RALF only)
(edit) @6269 [6269] 10 months westram - merged 6262-6267
(edit) @6261 [6261] 10 months westram - fixed error handling of gnuplot interface (unhandled GB_export_error)
(edit) @6260 [6260] 10 months westram * AWT_csp - made public members private - added necessary get_...() …
(edit) @6259 [6259] 10 months westram * close gnuplot window on any click or keypress (no need to close xterm)
(edit) @6258 [6258] 10 months westram - backport [6256]
(edit) @6256 [6256] 10 months westram * SECEDIT: crashed when trying to paint strand w/o any base * EDIT4: …
(edit) @6255 [6255] 10 months westram * Columns statistic - show status during initialization - removed …
(edit) @6254 [6254] 10 months westram - do not remove callbacks from deleted species
(edit) @6253 [6253] 10 months westram * AP_filter - replaced init functions by similar ctors
(edit) @6252 [6252] 10 months westram * added class WeightedFilter? (factory class for AP_filter, AP_weights and …
(edit) @6251 [6251] 10 months westram - fixed error/warning-format
(edit) @6250 [6250] 10 months westram * moved filter and weights selection from AWT to new library …
(edit) @6249 [6249] 10 months westram * merged [6246:6248] to cluster branch
(edit) @6245 [6245] 10 months westram - disabled CHECK_TREE_STRUCTURE
(edit) @6244 [6244] 10 months westram * class AP_main - privatized public member (user_push_counter) - …
(edit) @6243 [6243] 10 months westram * Detection of subtrees containing similar sequences
(edit) @6242 [6242] 10 months westram * renamed INFO-mode (AWT_MODE_MOD -> AWT_MODE_EDIT) * changed INFO-mode …
(edit) @6241 [6241] 10 months westram - removed useless result from GB_write_flag
(edit) @6240 [6240] 10 months westram - backport [6239]
(edit) @6238 [6238] 10 months westram * new class AliView? - provides a filtered/weighted 'view' onto an …
(edit) @6237 [6237] 10 months westram * backport [6236]
(edit) @6235 [6235] 10 months westram - no error if new directory in changeset
(edit) @6233 [6233] 11 months westram * if no tree selected, do NOT fallback to NDS list (instead show info …
(edit) @6232 [6232] 11 months westram * completes [6231] for DIST * moved some AWARs to di_awars.hxx
(edit) @6231 [6231] 11 months westram * class redesign - derived AP_tree from ARB_tree. Moved several members …
(edit) @6230 [6230] 11 months westram * no longer pass GBT_TREE-casted root-node-address of current tree (weird) …
(edit) @6229 [6229] 11 months westram - merged [6226:6228] into clusters branch
(edit) @6225 [6225] 11 months westram * moved many parts from AWT into small separate static libraries - …
(edit) @6220 [6220] 11 months westram * only one definition of faked virtual table pointer
(edit) @6219 [6219] 11 months westram * separated ARB_Tree_root as base class from AP_tree_root * AP_sequence …
(edit) @6218 [6218] 11 months westram * experimental branch
(edit) @6215 [6215] 11 months westram - merged [6214]
(edit) @6213 [6213] 11 months arb_build Auto version upgrade to 5.1 by devel@…
(edit) @6212 [6212] 11 months westram - bugfixes for arb_5.1
(edit) @6210 [6210] 11 months westram * arb_install.sh - check for arb.32.*.tgz / arb.64.*.tgz (no longer …
(edit) @6204 [6204] 12 months westram * GB_dump - if content read from DB is NULL, check for exported error
(edit) @6203 [6203] 12 months westram * fixed bug in createDataFromConsensus - wrote string with wrong size …
(edit) @6202 [6202] 12 months westram * backport [6198] + [6199]
(edit) @6196 [6196] 12 months westram * build instruction for OSX (thx to Matt Cottrell)
(edit) @6195 [6195] 12 months westram * repaired, tree and compression optimized
(edit) @6194 [6194] 12 months westram * missing transaction
(edit) @6193 [6193] 12 months westram * do not try to optimize alignments with no data (crashed)
(edit) @6185 [6185] 12 months westram * backport [6184]
(edit) @6182 [6182] 12 months arb_build Auto version upgrade to 5.0 by devel@…
(edit) @6181 [6181] 12 months westram * backport [6180]
(edit) @6178 [6178] 12 months westram * ignores
(edit) @6177 [6177] 12 months westram * moved trace code into SH/arb_trace * redirect stderr into log
(edit) @6176 [6176] 12 months westram * added breakpoint to malloc_error_break (OSX) * more detailed info * …
(edit) @6171 [6171] 12 months westram * backport [6170]
(edit) @6169 [6169] 12 months westram * backport [6167]
(edit) @6165 [6165] 12 months westram * backport [6164]
(edit) @6163 [6163] 12 months westram * backport [6161] + [6162]
(edit) @6159 [6159] 13 months westram * backport [6157]
(edit) @6156 [6156] 13 months westram * backport [6155]
(edit) @6154 [6154] 13 months westram * backport [6153]
(edit) @6152 [6152] 13 months arb_build Auto version upgrade to 4.43 by devel@…
(edit) @6149 [6149] 13 months westram * merged [6145], [6146], [6147] and [6148]
(edit) @6144 [6144] 13 months arb_build Auto version upgrade to 4.42 by devel@…
(edit) @6143 [6143] 13 months westram * backport [6141] (parts changing code, but only strings and comments)
(edit) @6142 [6142] 13 months westram * backport [6141] (parts not affecting code at all, i.e. helpfiles, figs, …
(edit) @6139 [6139] 13 months westram * backport [6137] + [6138]
(edit) @6132 [6132] 13 months westram * backporting parts of [6131]. Fixes truncated helpfiles for release (e.g. …
(edit) @6130 [6130] 13 months arb_build * branch rc for arb_5.0
(edit) @5456 [5456] 2 years baderk Removed obsolete branch: tum
(edit) @3 [3] 10 years anonymous This commit was manufactured by cvs2svn to create branch 'tum'.
(add) @1 [1] 10 years anonymous New repository initialized by cvs2svn.
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