| #32 |
Sequences with protection level >0 can be deleted in Search and Query
|
new
|
defect
|
major
|
ARB_NTREE
|
fog
|
| #39 |
Generating new name when importing sequences - additional fields ignored?
|
new
|
defect
|
major
|
ARB_NAME_SERVER
|
fog
|
| #59 |
crash when merging DBs with concatenated alignments
|
new
|
defect
|
major
|
ARB_NTREE
|
westram
|
| #86 |
undo after "destroy group" does not recover the group name; ARB crashes after a subsequent try to rename the group
|
new
|
defect
|
major
|
Library (DB)
|
meierh
|
| #100 |
Sec_Edit shows no structure when alignment was expanded
|
new
|
defect
|
major
|
ARB_SECEDIT
|
fog
|
| #119 |
Sort query results by distance
|
new
|
enhancement
|
major
|
ARB_NTREE
|
westram
|
| #143 |
Database versioning
|
new
|
enhancement
|
major
|
ARB_NTREE
|
westram
|
| #159 |
Sec edit crashes when saving secondary structure
|
new
|
defect
|
major
|
ARB_SECEDIT
|
fog
|
| #162 |
ARB crashes when transferring species or SAIs if the amount of alignemnt position is extended
|
new
|
defect
|
major
|
!NoIdea
|
fog
|
| #164 |
No connection to name server possible if this has been started by someone else
|
new
|
enhancement
|
major
|
ARB_NAME_SERVER
|
fog
|
| #169 |
Feature Request: More Information in Message Boxes when problems with conflicting field types pop up
|
new
|
enhancement
|
major
|
!NoIdea
|
fog
|
| #180 |
ARB NeighbourJoining, Sequence Compression Option is missing
|
new
|
enhancement
|
major
|
ARB_DIST
|
fog
|
| #182 |
ARB Neighbour Joining, remove reduction of input sequences when bootstrapping
|
new
|
enhancement
|
major
|
ARB_DIST
|
fog
|
| #184 |
RAxML, Filter settings in tree output message missing
|
new
|
defect
|
major
|
External_tools
|
fog
|
| #207 |
bootstrap transfer
|
new
|
enhancement
|
major
|
ARB_NTREE
|
westram
|
| #209 |
optionally skip numbers from xfig tree-export
|
assigned
|
defect
|
major
|
Library (GUI)
|
westram
|
| #217 |
Fix error handling in ARB
|
assigned
|
task
|
major
|
global
|
westram
|
| #232 |
Non-existing socket connection lets arb programs crash
|
new
|
defect
|
major
|
ARB_NTREE
|
baderk
|
| #233 |
"Global optimization of marked visible nodes" in ARB Parsimony crashes with "stack overflowwhen running on tree_SSURef_1200_slv_102.
|
new
|
defect
|
major
|
ARB_PARSIMONY
|
guest
|
| #235 |
replace Motif
|
new
|
task
|
major
|
Library (GUI)
|
westram
|
| #12 |
PT server admin
|
new
|
defect
|
normal
|
!NoIdea
|
westram
|
| #68 |
Missing drag line when moving group info
|
new
|
defect
|
normal
|
ARB_NTREE
|
westram
|
| #97 |
Ctrl-cursor positions false
|
new
|
defect
|
normal
|
ARB_EDIT4
|
westram
|
| #109 |
Crashes sometimes when selecting with right mouse
|
new
|
defect
|
normal
|
ARB_EDIT4
|
westram
|
| #111 |
Jump button bugs
|
assigned
|
defect
|
normal
|
ARB_NTREE
|
westram
|
| #118 |
Number of species in group optional
|
new
|
enhancement
|
normal
|
ARB_NTREE
|
westram
|
| #120 |
Treenames used as keys
|
new
|
enhancement
|
normal
|
Library (other)
|
westram
|
| #122 |
User masks crash
|
new
|
defect
|
normal
|
ARB_NTREE
|
westram
|
| #126 |
add faster checksum algorithm
|
new
|
enhancement
|
normal
|
!NoIdea
|
westram
|
| #127 |
Make discarding of sequences when running ARB Neighbour joining with Bootstraps optional
|
new
|
enhancement
|
normal
|
!NoIdea
|
fog
|
| #128 |
Add PhyML bootstrap option to the ARB menu
|
new
|
enhancement
|
normal
|
External_tools
|
fog
|
| #130 |
Add possibily to display tree horizontally flipped
|
new
|
enhancement
|
normal
|
ARB_NTREE
|
westram
|
| #158 |
Missing information about filter used when building trees with RAXML
|
new
|
enhancement
|
normal
|
ARB_NTREE
|
fog
|
| #165 |
Crashes/assertions when having alignments without related entries
|
new
|
defect
|
normal
|
Library (DB)
|
epruesse
|
| #170 |
Feature request: Missing compression button in ARB Neighbour Joining
|
new
|
enhancement
|
normal
|
ARB_DIST
|
fog
|
| #181 |
ARB Neighbour Joining, strange progress window when using bootstrap
|
new
|
defect
|
normal
|
ARB_DIST
|
fog
|
| #188 |
remove hardcoded limit in ACI
|
new
|
defect
|
normal
|
!NoIdea
|
westram
|
| #204 |
Load probe list
|
new
|
enhancement
|
normal
|
ARB_NTREE
|
westram
|
| #205 |
enhance multiprobing interface
|
new
|
enhancement
|
normal
|
ARB_NTREE
|
westram
|
| #206 |
multi selection boxes
|
assigned
|
enhancement
|
normal
|
Library (GUI)
|
westram
|
| #210 |
auto-sense submenus
|
new
|
enhancement
|
normal
|
Library (GUI)
|
westram
|
| #213 |
generalize ACI to work with groups
|
new
|
enhancement
|
normal
|
Library (DB)
|
epruesse
|
| #226 |
per user import/export filters
|
new
|
enhancement
|
normal
|
ARB_NTREE (import)
|
epruesse
|
| #229 |
sequence import number not reset
|
new
|
defect
|
normal
|
ARB_NTREE (import)
|
epruesse
|
| #230 |
"user comment" contains random data for newly created alignment
|
new
|
defect
|
normal
|
ARB_NTREE
|
epruesse
|
| #238 |
version information in libARBDB
|
new
|
enhancement
|
normal
|
Libraries (several)
|
epruesse
|
| #240 |
redesign query and dbScanner
|
assigned
|
enhancement
|
normal
|
Libraries (several)
|
westram
|
| #242 |
Verify that FFINDER is not affected by MAX_HITS issue
|
new
|
task
|
normal
|
ARB_PT_SERVER
|
epruesse
|
| #243 |
Dynamically adjust MATCH_MAX_HITS default
|
new
|
task
|
normal
|
ARB_PT_SERVER
|
epruesse
|
| #248 |
RESERVED keyword in arb_tcp_org.dat
|
new
|
task
|
normal
|
!NoIdea
|
epruesse
|
| #31 |
fix faked virtual table pointer
|
new
|
task
|
minor
|
Library (DB)
|
westram
|
| #71 |
Only one buttons in tree Admin to move trees works
|
new
|
task
|
minor
|
ARB_NTREE
|
guest
|
| #84 |
"ARB-Quit" Question Box appears, when quitting just "Tree Colors & Fonts" window by clicking on "x" icon
|
reopened
|
defect
|
minor
|
ARB_NTREE
|
meierh
|
| #108 |
Add groups for configurations
|
new
|
enhancement
|
minor
|
!NoIdea
|
westram
|
| #113 |
Allow to rename DB field
|
new
|
enhancement
|
minor
|
ARB_NTREE
|
westram
|
| #117 |
Base line width not applied immediately
|
new
|
defect
|
minor
|
ARB_NTREE
|
westram
|
| #124 |
Background color in 2nd NTREE window
|
new
|
defect
|
minor
|
ARB_NTREE
|
westram
|
| #179 |
No macro playback for modal windows
|
new
|
task
|
minor
|
Library (GUI)
|
westram
|