|
#32
|
Sequences with protection level >0 can be deleted in Search and Query
|
ARB_NTREE
|
defect
|
westram
|
new
|
26/05/07
|
|
#39
|
Generating new name when importing sequences - additional fields ignored?
|
ARB_NAME_SERVER
|
defect
|
devel
|
new
|
01/06/07
|
|
#59
|
crash when merging DBs with concatenated alignments
|
ARB_NTREE
|
defect
|
devel
|
new
|
21/08/07
|
|
#86
|
undo after "destroy group" does not recover the group name; ARB crashes after a subsequent try to rename the group
|
Library (DB)
|
defect
|
devel
|
new
|
08/11/07
|
|
#100
|
Sec_Edit shows no structure when alignment was expanded
|
ARB_SECEDIT
|
defect
|
westram
|
new
|
31/01/08
|
|
#159
|
Sec edit crashes when saving secondary structure
|
ARB_SECEDIT
|
defect
|
westram
|
new
|
21/03/09
|
|
#162
|
ARB crashes when transferring species or SAIs if the amount of alignemnt position is extended
|
!NoIdea
|
defect
|
devel
|
new
|
08/04/09
|
|
#184
|
RAxML, Filter settings in tree output message missing
|
External_tools
|
defect
|
devel
|
new
|
12/06/09
|
|
#186
|
Mess with Protection levels
|
global
|
defect
|
westram
|
new
|
12/06/09
|
|
#192
|
Nameserver not multiuser-capable
|
ARB_NAME_SERVER
|
defect
|
devel
|
new
|
19/06/09
|
|
#195
|
Remove stop-codon option does not work
|
External_tools
|
defect
|
devel
|
new
|
19/06/09
|
|
#209
|
optionally skip numbers from xfig tree-export
|
Library (GUI)
|
defect
|
westram
|
assigned
|
14/08/09
|
|
#215
|
Treatment of temporary files when running external programs in ARB
|
!NoIdea
|
defect
|
devel
|
new
|
31/10/09
|
|
#216
|
NDS Configurations can not be deleted
|
!NoIdea
|
defect
|
devel
|
new
|
20/11/09
|
|
#220
|
Name Server stalles when renaming large amounts of tag sequences
|
ARB_NAME_SERVER
|
defect
|
devel
|
new
|
04/02/10
|
|
#231
|
RaxMl tree filter settings are not displayed
|
!NoIdea
|
defect
|
devel
|
new
|
07/05/10
|
|
#232
|
Non-existing socket connection lets arb programs crash
|
ARB_NTREE
|
defect
|
devel
|
new
|
24/05/10
|
|
#233
|
"Global optimization of marked visible nodes" in ARB Parsimony crashes with "stack overflowwhen running on tree_SSURef_1200_slv_102.
|
ARB_PARSIMONY
|
defect
|
devel
|
new
|
15/06/10
|
|
#65
|
tree compare
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
25/09/07
|
|
#119
|
Sort query results by distance
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
21/05/08
|
|
#143
|
Database versioning
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
17/11/08
|
|
#164
|
No connection to name server possible if this has been started by someone else
|
ARB_NAME_SERVER
|
enhancement
|
devel
|
new
|
11/05/09
|
|
#169
|
Feature Request: More Information in Message Boxes when problems with conflicting field types pop up
|
!NoIdea
|
enhancement
|
devel
|
new
|
16/05/09
|
|
#180
|
ARB NeighbourJoining, Sequence Compression Option is missing
|
ARB_DIST
|
enhancement
|
devel
|
new
|
12/06/09
|
|
#182
|
ARB Neighbour Joining, remove reduction of input sequences when bootstrapping
|
ARB_DIST
|
enhancement
|
devel
|
new
|
12/06/09
|
|
#207
|
bootstrap transfer
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
14/08/09
|
|
#217
|
Fix error handling in ARB
|
global
|
task
|
westram
|
assigned
|
21/11/09
|
|
#227
|
AISC cant handle strings longer than 1024
|
Library (other)
|
task
|
devel
|
new
|
11/03/10
|
|
#235
|
replace Motif
|
Library (GUI)
|
task
|
devel
|
new
|
07/09/10
|
|
#1
|
Sequence refresh problem in ARB_EDIT4
|
ARB_EDIT4
|
defect
|
devel
|
new
|
28/03/07
|
|
#12
|
PT server admin
|
!NoIdea
|
defect
|
westram
|
new
|
20/04/07
|
|
#26
|
Multiple renames produce zombies
|
!NoIdea
|
defect
|
westram
|
new
|
15/05/07
|
|
#29
|
probe match/design parameters
|
ARB_PT_SERVER
|
defect
|
devel
|
new
|
24/05/07
|
|
#43
|
Deleting columns causes extra calculation. Why?
|
ARB_NTREE
|
defect
|
westram
|
new
|
12/06/07
|
|
#53
|
Save configuration
|
ARB_EDIT4
|
defect
|
devel
|
new
|
24/07/07
|
|
#68
|
Missing drag line when moving group info
|
ARB_NTREE
|
defect
|
westram
|
new
|
30/10/07
|
|
#76
|
Old Aligner dos not work
|
ARB_EDIT4
|
defect
|
devel
|
new
|
02/11/07
|
|
#82
|
Debug Meldungen in Sec Edit abschalten
|
ARB_EDIT4
|
defect
|
devel
|
new
|
05/11/07
|
|
#95
|
Alignment not working
|
ARB_EDIT4
|
defect
|
devel
|
new
|
10/12/07
|
|
#97
|
Ctrl-cursor positions false
|
ARB_EDIT4
|
defect
|
devel
|
new
|
18/01/08
|
|
#109
|
Crashes sometimes when selecting with right mouse
|
ARB_EDIT4
|
defect
|
devel
|
new
|
27/02/08
|
|
#111
|
Jump button bugs
|
ARB_NTREE
|
defect
|
westram
|
assigned
|
11/03/08
|
|
#122
|
User masks crash
|
ARB_NTREE
|
defect
|
devel
|
new
|
21/05/08
|
|
#144
|
Treeing for protein partial sequence
|
!NoIdea
|
defect
|
devel
|
new
|
25/11/08
|
|
#145
|
bug when realign nucleic acid according to aligned protein
|
!NoIdea
|
defect
|
devel
|
new
|
25/11/08
|
|
#165
|
Crashes/assertions when having alignments without related entries
|
Library (DB)
|
defect
|
devel
|
new
|
12/05/09
|
|
#181
|
ARB Neighbour Joining, strange progress window when using bootstrap
|
ARB_DIST
|
defect
|
devel
|
new
|
12/06/09
|
|
#188
|
remove hardcoded limit in ACI
|
!NoIdea
|
defect
|
devel
|
new
|
12/06/09
|
|
#191
|
Some files in genbank format introduce multiple entries in DB field "nuc_nr" when imported with filter "genbank_silva.ift"
|
ARB_NTREE (import)
|
defect
|
devel
|
new
|
15/06/09
|
|
#203
|
Sorting of numerical values does not work correctly
|
ARB_NTREE
|
defect
|
devel
|
new
|
12/08/09
|
|
#208
|
Filter RAxML output
|
External_tools
|
defect
|
devel
|
new
|
14/08/09
|
|
#218
|
editor crashes when moving cursor inside detailed column statistic
|
ARB_EDIT4
|
defect
|
devel
|
new
|
03/02/10
|
|
#219
|
remove detailed column statistic
|
ARB_EDIT4
|
defect
|
devel
|
new
|
03/02/10
|
|
#221
|
delete species displayed in input mask
|
ARB_NTREE
|
defect
|
devel
|
new
|
10/02/10
|
|
#224
|
line 143 cannot execute binary file
|
ARB_NTREE
|
defect
|
devel
|
new
|
13/02/10
|
|
#225
|
error: can't allocate region
|
ARB_PARSIMONY
|
defect
|
devel
|
new
|
16/02/10
|
|
#229
|
sequence import number not reset
|
ARB_NTREE (import)
|
defect
|
devel
|
new
|
07/04/10
|
|
#230
|
"user comment" contains random data for newly created alignment
|
ARB_NTREE
|
defect
|
devel
|
new
|
07/04/10
|
|
#239
|
Pt server can not be built
|
ARB_PT_SERVER
|
defect
|
devel
|
new
|
07/06/11
|
|
#245
|
ARB Genbank export for nucleotides
|
!NoIdea
|
defect
|
devel
|
new
|
17/10/11
|
|
#18
|
New alignment type for custom sequence-data (non RNA-DNA-AA)
|
!NoIdea
|
enhancement
|
westram
|
new
|
02/05/07
|
|
#52
|
Open species information from within Editor
|
ARB_EDIT4
|
enhancement
|
devel
|
new
|
24/07/07
|
|
#61
|
Concatenated alignments
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
31/08/07
|
|
#63
|
Macro recording/playback for clients
|
!NoIdea
|
enhancement
|
devel
|
new
|
20/09/07
|
|
#64
|
New circular tree view
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
21/09/07
|
|
#70
|
Fast Aligner message window
|
ARB_EDIT4
|
enhancement
|
devel
|
new
|
02/11/07
|
|
#73
|
Fit on X pages is strange
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
02/11/07
|
|
#74
|
Remove menu poit Tools -> Network
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
02/11/07
|
|
#83
|
Add information who add created/updated the PT-server
|
ARB_PT_SERVER
|
enhancement
|
devel
|
new
|
07/11/07
|
|
#118
|
Number of species in group optional
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
21/05/08
|
|
#120
|
Treenames used as keys
|
Library (other)
|
enhancement
|
devel
|
new
|
21/05/08
|
|
#126
|
add faster checksum algorithm
|
!NoIdea
|
enhancement
|
westram
|
new
|
21/05/08
|
|
#127
|
Make discarding of sequences when running ARB Neighbour joining with Bootstraps optional
|
!NoIdea
|
enhancement
|
devel
|
new
|
25/05/08
|
|
#128
|
Add PhyML bootstrap option to the ARB menu
|
External_tools
|
enhancement
|
devel
|
new
|
25/05/08
|
|
#130
|
Add possibily to display tree horizontally flipped
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
04/07/08
|
|
#137
|
Feature Request - Link Editor with Sepcies information information
|
ARB_EDIT4
|
enhancement
|
devel
|
new
|
29/10/08
|
|
#155
|
Sorting trees or folders for trees
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
01/03/09
|
|
#158
|
Missing information about filter used when building trees with RAXML
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
21/03/09
|
|
#170
|
Feature request: Missing compression button in ARB Neighbour Joining
|
ARB_DIST
|
enhancement
|
devel
|
new
|
18/05/09
|
|
#173
|
field conversion in merge tool
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
24/05/09
|
|
#175
|
ARB_EDIT4 block selection/deselection
|
ARB_EDIT4
|
enhancement
|
devel
|
new
|
27/05/09
|
|
#194
|
Import from ARB-database
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
19/06/09
|
|
#204
|
Load probe list
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
14/08/09
|
|
#205
|
enhance multiprobing interface
|
ARB_NTREE
|
enhancement
|
devel
|
new
|
14/08/09
|
|
#206
|
multi selection boxes
|
Library (GUI)
|
enhancement
|
westram
|
assigned
|
14/08/09
|
|
#210
|
auto-sense submenus
|
Library (GUI)
|
enhancement
|
devel
|
new
|
14/08/09
|
|
#212
|
Feature request: Search next relatives of Listed Species
|
!NoIdea
|
enhancement
|
devel
|
new
|
18/08/09
|
|
#213
|
generalize ACI to work with groups
|
Library (DB)
|
enhancement
|
devel
|
new
|
29/09/09
|
|
#226
|
per user import/export filters
|
ARB_NTREE (import)
|
enhancement
|
devel
|
new
|
01/03/10
|
|
#228
|
partial fast alignment vs "partial relatives"
|
ARB_EDIT4
|
enhancement
|
westram
|
assigned
|
31/03/10
|
|
#236
|
Add GDE menus for more popular alignment/tree reconstruction tools
|
!NoIdea
|
enhancement
|
devel
|
new
|
10/11/10
|
|
#238
|
version information in libARBDB
|
Libraries (several)
|
enhancement
|
devel
|
new
|
23/11/10
|
|
#240
|
redesign query and dbScanner
|
Libraries (several)
|
enhancement
|
westram
|
assigned
|
20/07/11
|
|
#244
|
allow external users to create tickets?
|
!NoIdea
|
enhancement
|
devel
|
new
|
17/10/11
|
|
#56
|
Layout changes
|
!NoIdea
|
task
|
westram
|
new
|
24/07/07
|
|
#132
|
[amd64] "(GB_INT) -1" shows up as "4294967295" (2^32-1)
|
Library (DB)
|
task
|
westram
|
new
|
18/07/08
|
|
#242
|
Verify that FFINDER is not affected by MAX_HITS issue
|
ARB_PT_SERVER
|
task
|
epruesse
|
new
|
05/10/11
|
|
#243
|
Dynamically adjust MATCH_MAX_HITS default
|
ARB_PT_SERVER
|
task
|
devel
|
new
|
05/10/11
|
|
#248
|
RESERVED keyword in arb_tcp_org.dat
|
!NoIdea
|
task
|
devel
|
new
|
29/10/11
|
|
#250
|
import/export for secondary structures
|
ARB_NTREE
|
task
|
devel
|
new
|
11/11/11
|
