Ticket #159: bt_secstr_save

File bt_secstr_save, 1.7 KB (added by meierh, 14 years ago)
Line 
1[Action: 'arb_edit4 -c default_configuration &']
2Using '.arb_prop/edit4_ali_16s.arb'
3Note: SILVA Aligner disabled (galign not found)
4* Fixing non-adjacent regions: 4289..4289 and 4290..4346
5* Fixing non-adjacent regions: 12882..12882 and 12883..13289
6* Fixing non-adjacent regions: 18464..18464 and 18465..18540
7* Fixing non-adjacent regions: 33134..33134 and 33335..33446
8* Fixing non-adjacent regions: 34996..34996 and 34997..35454
9* Autofix acute angle (loop2strand=5.11, abs=0.92) of helix nr '
10* Autofix acute angle (loop2strand=2.89, abs=0.68) of helix nr '
11* Deleting duplicated entry '_STRUCT' (0x970c30)
12
13-------------------- ARB-backtrace for 'received signal 11':
14/local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libARBDB.so(GBK
15/local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libARBDB.so(sig
16/lib64/libc.so.6[0x2aac147fabd0]
17/lib64/libc.so.6(strlen+0x40)[0x2aac1483fbd0]
18/local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libARBDB.so(GBS
19arb_edit4(_Z30SEC_xstring_to_foldedHelixListPKcmPK8BI_helix+0x10
20arb_edit4[0x48eb1a]
21/local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libAW.so(_Z18AW
22/usr/lib64/libXt.so.6(XtCallCallbackList+0x131)[0x2aac12e40bf1]
23/usr/lib64/libXm.so.4[0x2aac126338e5]
24/usr/lib64/libXt.so.6[0x2aac12e75846]
25/usr/lib64/libXt.so.6(_XtTranslateEvent+0x35e)[0x2aac12e75fee]
26/usr/lib64/libXt.so.6(XtDispatchEventToWidget+0x436)[0x2aac12e4e
27/usr/lib64/libXt.so.6[0x2aac12e4f040]
28/usr/lib64/libXt.so.6(XtDispatchEvent+0xba)[0x2aac12e4dfca]
29/usr/lib64/libXt.so.6(XtAppMainLoop+0x45)[0x2aac12e4e165]
30arb_edit4(main+0x458)[0x44ae98]
31/lib64/libc.so.6(__libc_start_main+0xf4)[0x2aac147e7b54]
32arb_edit4[0x4346e9]
33-------------------- End of backtrace
34[Terminating with signal 11]
35ARB_DB_SERVER: a client died abnormally