| 1 | [Action: 'arb_edit4 -c default_configuration &'] |
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| 2 | Using '.arb_prop/edit4_ali_16s.arb' |
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| 3 | Note: SILVA Aligner disabled (galign not found) |
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| 4 | * Fixing non-adjacent regions: 4289..4289 and 4290..4346 |
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| 5 | * Fixing non-adjacent regions: 12882..12882 and 12883..13289 |
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| 6 | * Fixing non-adjacent regions: 18464..18464 and 18465..18540 |
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| 7 | * Fixing non-adjacent regions: 33134..33134 and 33335..33446 |
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| 8 | * Fixing non-adjacent regions: 34996..34996 and 34997..35454 |
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| 9 | * Autofix acute angle (loop2strand=5.11, abs=0.92) of helix nr ' |
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| 10 | * Autofix acute angle (loop2strand=2.89, abs=0.68) of helix nr ' |
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| 11 | * Deleting duplicated entry '_STRUCT' (0x970c30) |
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| 12 | |
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| 13 | -------------------- ARB-backtrace for 'received signal 11': |
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| 14 | /local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libARBDB.so(GBK |
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| 15 | /local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libARBDB.so(sig |
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| 16 | /lib64/libc.so.6[0x2aac147fabd0] |
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| 17 | /lib64/libc.so.6(strlen+0x40)[0x2aac1483fbd0] |
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| 18 | /local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libARBDB.so(GBS |
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| 19 | arb_edit4(_Z30SEC_xstring_to_foldedHelixListPKcmPK8BI_helix+0x10 |
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| 20 | arb_edit4[0x48eb1a] |
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| 21 | /local/scratch/meierh/ARB_SVN_5953/trunk/LIBLINK/libAW.so(_Z18AW |
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| 22 | /usr/lib64/libXt.so.6(XtCallCallbackList+0x131)[0x2aac12e40bf1] |
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| 23 | /usr/lib64/libXm.so.4[0x2aac126338e5] |
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| 24 | /usr/lib64/libXt.so.6[0x2aac12e75846] |
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| 25 | /usr/lib64/libXt.so.6(_XtTranslateEvent+0x35e)[0x2aac12e75fee] |
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| 26 | /usr/lib64/libXt.so.6(XtDispatchEventToWidget+0x436)[0x2aac12e4e |
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| 27 | /usr/lib64/libXt.so.6[0x2aac12e4f040] |
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| 28 | /usr/lib64/libXt.so.6(XtDispatchEvent+0xba)[0x2aac12e4dfca] |
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| 29 | /usr/lib64/libXt.so.6(XtAppMainLoop+0x45)[0x2aac12e4e165] |
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| 30 | arb_edit4(main+0x458)[0x44ae98] |
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| 31 | /lib64/libc.so.6(__libc_start_main+0xf4)[0x2aac147e7b54] |
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| 32 | arb_edit4[0x4346e9] |
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| 33 | -------------------- End of backtrace |
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| 34 | [Terminating with signal 11] |
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| 35 | ARB_DB_SERVER: a client died abnormally |
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