| 1 | # main topics: |
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| 2 | UP arb.hlp |
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| 3 | UP glossary.hlp |
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| 4 | UP mode.hlp |
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| 5 | |
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| 6 | # sub topics: |
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| 7 | SUB sp_search.hlp |
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| 8 | SUB species_configs.hlp |
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| 9 | SUB colorize.hlp |
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| 10 | SUB mode_mark.hlp |
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| 11 | SUB sp_mark.hlp |
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| 12 | |
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| 13 | # format described in ../help.readme |
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| 14 | |
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| 15 | |
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| 16 | TITLE What are Marked Species? |
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| 17 | |
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| 18 | DESCRIPTION All species have a flag which can be set to FALSE or TRUE. |
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| 19 | All species with the flag set to TRUE are called marked |
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| 20 | species. Normally this flag is used to specify a subgroup of |
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| 21 | species for editors, tree building programs ... |
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| 22 | |
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| 23 | EXAMPLES Mark queried species: |
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| 24 | |
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| 25 | 1. Select 'Search' from the ARB main window |
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| 26 | 2. Perform a search |
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| 27 | 3. Use 'Mark Listed Unmark Rest' to mark all queried species |
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| 28 | |
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| 29 | Mark selected species: |
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| 30 | |
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| 31 | 1. Select a species (in tree, editor, search result etc.; see LINK{selected.hlp}) |
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| 32 | 2. Open the LINK{sp_info.hlp} |
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| 33 | 3. Check the 'Marked?' toggle. |
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| 34 | |
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| 35 | Mark all species in selected tree or subtree: |
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| 36 | |
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| 37 | - via menu: |
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| 38 | |
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| 39 | 1. Unmark all species: <ARB/Species/Mark species/Unmark all Specie> |
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| 40 | 2. <ARB/Species/Mark species/Species in Tree/Mark species in Tree> |
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| 41 | |
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| 42 | - using the mouse in tree display: |
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| 43 | |
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| 44 | 1. Select the <MARK MODE> |
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| 45 | 2. Press the left mouse button |
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| 46 | - somewhere outside the tree to mark the whole tree, or |
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| 47 | - at a subtree to mark only the subtree. |
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| 48 | |
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| 49 | - using the keyboard in tree display: |
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| 50 | |
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| 51 | Use any of the keyboard shortcuts defined for the |
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| 52 | tree display (see LINK{nt_keys.hlp}). |
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| 53 | |
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| 54 | Save/Restore sets of marked species: |
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| 55 | |
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| 56 | see LINK{species_configs.hlp} |
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| 57 | |
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