| 1 | #ifndef RDP_INFO_H |
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| 2 | #define RDP_INFO_H |
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| 3 | |
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| 4 | #ifndef GLOBAL_H |
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| 5 | #include "global.h" |
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| 6 | #endif |
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| 7 | #ifndef FUN_H |
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| 8 | #include "fun.h" |
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| 9 | #endif |
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| 10 | |
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| 11 | // ------------------------------- |
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| 12 | // RDP-defined comments (Embl+GenBank) |
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| 13 | |
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| 14 | struct OrgInfo : virtual Noncopyable { |
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| 15 | char *source; |
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| 16 | char *cultcoll; |
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| 17 | char *formname; |
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| 18 | char *nickname; |
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| 19 | char *commname; |
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| 20 | char *hostorg; |
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| 21 | |
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| 22 | OrgInfo() { |
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| 23 | source = no_content(); |
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| 24 | cultcoll = no_content(); |
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| 25 | formname = no_content(); |
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| 26 | nickname = no_content(); |
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| 27 | commname = no_content(); |
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| 28 | hostorg = no_content(); |
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| 29 | } |
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| 30 | ~OrgInfo() { |
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| 31 | freenull(source); |
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| 32 | freenull(cultcoll); |
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| 33 | freenull(formname); |
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| 34 | freenull(nickname); |
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| 35 | freenull(commname); |
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| 36 | freenull(hostorg); |
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| 37 | } |
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| 38 | |
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| 39 | void set_content_from(const OrgInfo& other) { |
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| 40 | copy_content(source, other.source); |
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| 41 | copy_content(cultcoll, other.cultcoll); |
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| 42 | copy_content(formname, other.formname); |
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| 43 | copy_content(nickname, other.nickname); |
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| 44 | copy_content(commname, other.commname); |
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| 45 | copy_content(hostorg, other.hostorg); |
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| 46 | } |
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| 47 | |
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| 48 | bool exists() const { |
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| 49 | return |
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| 50 | has_content(source) || |
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| 51 | has_content(cultcoll) || |
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| 52 | has_content(formname) || |
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| 53 | has_content(nickname) || |
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| 54 | has_content(commname) || |
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| 55 | has_content(hostorg); |
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| 56 | } |
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| 57 | }; |
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| 58 | |
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| 59 | struct SeqInfo : virtual Noncopyable { |
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| 60 | char comp3; // yes or no, y/n |
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| 61 | char comp5; // yes or no, y/n |
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| 62 | |
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| 63 | char *RDPid; |
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| 64 | char *gbkentry; |
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| 65 | char *methods; |
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| 66 | |
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| 67 | SeqInfo() { |
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| 68 | comp3 = ' '; |
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| 69 | comp5 = ' '; |
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| 70 | RDPid = no_content(); |
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| 71 | gbkentry = no_content(); |
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| 72 | methods = no_content(); |
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| 73 | } |
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| 74 | ~SeqInfo() { |
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| 75 | freenull(RDPid); |
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| 76 | freenull(gbkentry); |
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| 77 | freenull(methods); |
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| 78 | } |
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| 79 | void set_content_from(const SeqInfo& other) { |
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| 80 | comp3 = other.comp3; |
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| 81 | comp5 = other.comp5; |
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| 82 | copy_content(RDPid, other.RDPid); |
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| 83 | copy_content(gbkentry, other.gbkentry); |
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| 84 | copy_content(methods, other.methods); |
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| 85 | } |
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| 86 | bool exists() const { |
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| 87 | return |
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| 88 | comp3 != ' ' || |
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| 89 | comp5 != ' ' || |
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| 90 | has_content(RDPid) || |
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| 91 | has_content(gbkentry) || |
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| 92 | has_content(methods); |
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| 93 | } |
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| 94 | }; |
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| 95 | |
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| 96 | struct RDP_comments : virtual Noncopyable { |
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| 97 | OrgInfo orginf; |
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| 98 | SeqInfo seqinf; |
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| 99 | char *others; |
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| 100 | |
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| 101 | RDP_comments() : others(NULp) {} |
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| 102 | ~RDP_comments() { freenull(others); } |
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| 103 | |
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| 104 | void set_content_from(const RDP_comments& other) { |
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| 105 | orginf.set_content_from(other.orginf); |
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| 106 | seqinf.set_content_from(other.seqinf); |
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| 107 | copy_content(others, other.others); |
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| 108 | } |
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| 109 | bool exists() const { return orginf.exists() || seqinf.exists() || has_content(others); } |
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| 110 | }; |
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| 111 | |
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| 112 | #else |
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| 113 | #error rdp_info.h included twice |
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| 114 | #endif // RDP_INFO_H |
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