source: branches/lib/HELP_SOURCE/source/gen_options.hlp

Last change on this file was 19532, checked in by westram, 4 months ago
  • reintegrates 'help' into 'trunk'
    • tweak arb documentation:
      • automatically link
        • ticket references to arb bug tracker (only affects html version).
        • found URLs.
      • page titles
        • warn about long titles.
        • introduce SUBTITLEs (automatically triggered by multi-line titles in source files).
        • increase allowed length (limited by subwindow width).
      • cleanup header sections in all helpfiles.
      • fix and/or update several help files.
      • document syntax of help sources.
      • build issues:
        • when xml validation fails, next build no longer uses invalid xml ⇒ keeps failing.
        • remove output files on error (including files below ARBHOME/lib).
        • pipe output through logs to ensure proper wrapping in Entering/Leaving lines.
    • moves Tree admin + NDS menu entries to top of menu
  • adds: log:branches/help@18783:19531
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 2.0 KB
Line 
1#       main topics:
2UP      arb.hlp
3UP      glossary.hlp
4
5#       sub topics:
6#SUB     subtopic.hlp
7
8# format described in ../help.readme
9
10
11TITLE           Genemap options
12
13OCCURRENCE      ARB Gene Map/Properties/Options
14
15DESCRIPTION     Options for display of genome map:
16
17                General:
18
19                  Arrow size
20
21                    Defines the pizel-size of drawn arrows.
22                    Arrows indicate the direction of the gene.
23
24                  Show hidden genes
25
26                    Toggles whether hidden genes are displayed or not (see LINK{gene_hide.hlp}).
27
28                  Show NDS for all genes
29
30                    Normally NDS information (see LINK{props_nds.hlp}) is only displayed
31                    for all marked and for the currently selected gene.
32                    If checked, NDS info will be displayed for all genes.
33
34                  Auto jump to selected gene
35
36                    If checked, the display automatically centers on the selected gene.
37
38                "Book-style" display:
39
40                  Basepositions per 'Line'
41
42                    Defines the width of the book in "alignment positions"
43
44                    The next 'Line' will start at the left side below the previous 'Line',
45                    as lines in a book do.
46
47                  Width factor / Height of lines
48
49                    Defines horizontal / vertical display scaling.
50
51                  Space between lines
52
53                    Number of pixels between lines.
54
55                Vertical display:
56
57                  Factor X/Y
58
59                    Defines horizontal / vertical display scaling.
60
61                Radial display:
62
63                  Center size
64
65                    Defines the size of the inner, empty area of the radial display
66
67                  Radial size
68
69                    Defines the size of the outer part of the radial
70                    display (which displays the genes).
71
72
73NOTES           See also LINK{gen_disp_style.hlp}.
74
75EXAMPLES        None
76
77WARNINGS        None
78
79BUGS            Not working yet!!!
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