source: branches/lib/HELP_SOURCE/source/mark_genes.hlp

Last change on this file was 19532, checked in by westram, 4 months ago
  • reintegrates 'help' into 'trunk'
    • tweak arb documentation:
      • automatically link
        • ticket references to arb bug tracker (only affects html version).
        • found URLs.
      • page titles
        • warn about long titles.
        • introduce SUBTITLEs (automatically triggered by multi-line titles in source files).
        • increase allowed length (limited by subwindow width).
      • cleanup header sections in all helpfiles.
      • fix and/or update several help files.
      • document syntax of help sources.
      • build issues:
        • when xml validation fails, next build no longer uses invalid xml ⇒ keeps failing.
        • remove output files on error (including files below ARBHOME/lib).
        • pipe output through logs to ensure proper wrapping in Entering/Leaving lines.
    • moves Tree admin + NDS menu entries to top of menu
  • adds: log:branches/help@18783:19531
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 831 bytes
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1#       main topics:
2UP      arb.hlp
3UP      glossary.hlp
4UP      genes.hlp
5
6#       sub topics:
7SUB     gene_search.hlp
8
9# format described in ../help.readme
10
11
12TITLE           What are Marked Genes?
13
14DESCRIPTION     All genes have a flag which can be set to FALSE or TRUE.
15                All genes with the flag set to TRUE are called marked
16                species. Normally this flag is used to specify a subgroup of
17                genes and then perform some actions on these genes.
18
19NOTES           None
20
21EXAMPLES        Mark one known gene:
22
23                        1. Search for the Gene using LINK{gene_search.hlp}
24                        2. Select the gene
25                        3. Mark it
26
27                Mark a list of genes:
28
29                        1. Search for the genes using LINK{gene_search.hlp}
30                        2. Press <Mark Listed/Unmark Rest>
31
32WARNINGS        Be careful: The marked genes can be spread over several
33                organisms w/o showing this in the ARB_GENEMAP window.
34
35BUGS            No bugs known
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