|
Last change
on this file was
19532,
checked in by westram, 4 months ago
|
- reintegrates 'help' into 'trunk'
- tweak arb documentation:
- automatically link
- ticket references to arb
 tracker (only affects html version).
- found URLs.
- page titles
- warn about long titles.
- introduce SUBTITLEs (automatically triggered by multi-line titles in source files).
- increase allowed length (limited by subwindow width).
- cleanup header sections in all helpfiles.
- fix and/or update several help files.
- document syntax of help sources.
- build issues:
- when xml validation fails, next build no longer uses invalid xml ⇒ keeps failing.
- remove output files on error (including files below ARBHOME/lib).
- pipe output through logs to ensure proper wrapping in Entering/Leaving lines.
- moves Tree admin + NDS menu entries to top of menu
- adds: log:branches/help@18783:19531
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File size:
648 bytes
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| Line | |
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| 1 | # main topics: |
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| 2 | UP arb.hlp |
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| 3 | UP glossary.hlp |
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| 4 | |
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| 5 | # sub topics: |
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| 6 | #SUB subtopic.hlp |
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| 7 | |
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| 8 | # format described in ../help.readme |
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| 9 | |
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| 10 | |
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| 11 | TITLE Save / load secondary structure |
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| 12 | |
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| 13 | OCCURRENCE ARB_SECEDIT/File/Load structure |
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| 14 | ARB_SECEDIT/File/Save structure |
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| 15 | |
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| 16 | DESCRIPTION Allows to save/load the secondary structure information into/from |
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| 17 | a file. |
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| 18 | |
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| 19 | The information is stored HELIX-relative, i.e. two alignments sharing the |
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| 20 | same HELIX information, may exchange their secondary structure information |
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| 21 | using this function. |
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| 22 | |
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| 23 | NOTES None |
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| 24 | |
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| 25 | EXAMPLES None |
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| 26 | |
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| 27 | WARNINGS None |
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| 28 | |
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| 29 | BUGS No bugs known |
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