| 1 | // ============================================================= // |
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| 2 | // // |
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| 3 | // File : NT_group_search.cxx // |
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| 4 | // Purpose : GUI for group search // |
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| 5 | // // |
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| 6 | // Coded by Ralf Westram (coder@reallysoft.de) in April 2017 // |
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| 7 | // http://www.arb-home.de/ // |
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| 8 | // // |
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| 9 | // ============================================================= // |
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| 10 | |
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| 11 | #include "NT_group_search.h" |
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| 12 | #include "NT_local.h" |
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| 13 | #include "ad_trees.h" |
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| 14 | |
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| 15 | #include <group_search.h> |
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| 16 | #include <TreeDisplay.hxx> |
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| 17 | |
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| 18 | #include <awt_config_manager.hxx> |
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| 19 | #include <awt_sel_boxes.hxx> |
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| 20 | |
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| 21 | #include <aw_select.hxx> |
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| 22 | #include <aw_root.hxx> |
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| 23 | #include <aw_awar.hxx> |
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| 24 | #include <aw_msg.hxx> |
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| 25 | #include <aw_awar_defs.hxx> |
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| 26 | |
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| 27 | #include <ad_cb_prot.h> |
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| 28 | |
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| 29 | using namespace std; |
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| 30 | |
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| 31 | #if defined(DEVEL_RALF) && 0 |
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| 32 | #define TRACE(msg) fprintf(stderr, "TRACE: %s\n", (msg)) |
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| 33 | #else // !DEVEL_RALF |
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| 34 | #define TRACE(msg) |
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| 35 | #endif |
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| 36 | |
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| 37 | // -------------------------------- |
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| 38 | // AWARs for group search |
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| 39 | |
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| 40 | #define GS_AWARS "group_search/" |
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| 41 | #define GS_AWARS_DUPS GS_AWARS "dup/" |
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| 42 | #define GS_AWARS_TMP "tmp/" GS_AWARS |
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| 43 | |
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| 44 | #define AWAR_MAYBE_INVALID_GROUP GS_AWARS_TMP "sellist" // may point to deleted or unlisted group |
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| 45 | #define AWAR_SELECTED_RESULT_GROUP GS_AWARS_TMP "selected" // bound to AWAR_MAYBE_INVALID_GROUP, but never points to deleted or unlisted group |
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| 46 | #define AWAR_GROUP_HIT_COUNT GS_AWARS_TMP "hits" |
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| 47 | #define AWAR_SELECTED_GROUP_NAME GS_AWARS_TMP "selname" |
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| 48 | #define AWAR_RESULTING_GROUP_NAME GS_AWARS_TMP "resname" |
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| 49 | #define AWAR_TREE_SELECTED GS_AWARS_TMP "treesel" |
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| 50 | #define AWAR_RESULT_ORDER GS_AWARS_TMP "order" |
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| 51 | |
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| 52 | #define AWAR_SEARCH_WHICH_TREES GS_AWARS "trees" |
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| 53 | #define AWAR_SEARCH_MODE GS_AWARS "mode" |
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| 54 | #define AWAR_MATCH_MODE GS_AWARS "match" |
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| 55 | #define AWAR_MARK_TARGET GS_AWARS "markwhat" |
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| 56 | #define AWAR_RENAME_EXPRESSION GS_AWARS "aci" |
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| 57 | |
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| 58 | #define AWAR_DUPLICATE_MODE GS_AWARS_DUPS "mode" |
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| 59 | #define AWAR_DUP_TREE_MODE GS_AWARS_DUPS "locmode" |
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| 60 | #define AWAR_DUP_NAME_MATCH GS_AWARS_DUPS "namematch" |
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| 61 | #define AWAR_DUP_MIN_CLUSTER_SIZE GS_AWARS_DUPS "clustsize" |
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| 62 | #define AWAR_DUP_MIN_WORDS GS_AWARS_DUPS "minwords" |
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| 63 | #define AWAR_DUP_IGNORE_CASE GS_AWARS_DUPS "ignore_case" |
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| 64 | #define AWAR_DUP_EXCLUDED_WORDS GS_AWARS_DUPS "excluded" |
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| 65 | #define AWAR_DUP_WORD_SEPARATORS GS_AWARS_DUPS "separators" |
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| 66 | |
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| 67 | #define AWARFORMAT_CRIT_OPERATOR GS_AWARS "op%i" |
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| 68 | #define AWARFORMAT_CRIT_KEY GS_AWARS "key%i" |
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| 69 | #define AWARFORMAT_CRIT_EQUALS GS_AWARS "equals%i" |
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| 70 | #define AWARFORMAT_CRIT_MATCHES GS_AWARS "match%i" |
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| 71 | |
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| 72 | #define MAX_CRITERIA 3 |
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| 73 | |
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| 74 | inline const char *criterion_awar_name(const char *format, int crit) { |
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| 75 | gs_assert(crit>=1 && crit<=MAX_CRITERIA); |
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| 76 | return GBS_global_string(format, crit); |
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| 77 | } |
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| 78 | |
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| 79 | enum TreeSearchRange { |
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| 80 | SEARCH_CURRENT_TREE, |
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| 81 | SEARCH_SELECTED_TREES, |
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| 82 | SEARCH_ALL_TREES, |
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| 83 | }; |
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| 84 | |
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| 85 | enum DuplicateMode { |
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| 86 | DONT_MIND_DUPLICATES, |
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| 87 | ONLY_DUPLICATES, |
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| 88 | ONLY_UNIQUE, |
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| 89 | }; |
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| 90 | |
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| 91 | // --------------------- |
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| 92 | // data for UI |
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| 93 | |
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| 94 | class GroupUIdata : virtual Noncopyable { |
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| 95 | GBDATA *gb_main; |
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| 96 | SmartPtr<GroupSearch> group_search; |
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| 97 | bool show_tree_name; // show treename in result list? |
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| 98 | AW_selection_list *result_list; |
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| 99 | AW_selection *tree_list; |
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| 100 | |
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| 101 | void update_search_filters(); |
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| 102 | void update_search_range(); |
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| 103 | void update_duplicate_settings(); |
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| 104 | |
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| 105 | void refresh_hit_count(size_t count) { |
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| 106 | AW_root::SINGLETON->awar(AWAR_GROUP_HIT_COUNT)->write_int(count); // update hit count |
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| 107 | } |
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| 108 | void result_order_changed_cb(AW_root *awr) { |
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| 109 | if (group_search.isSet()) { |
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| 110 | GroupSortCriterion crit = GroupSortCriterion(awr->awar(AWAR_RESULT_ORDER)->read_int()); |
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| 111 | group_search->addSortCriterion(crit); |
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| 112 | refill_result_list(); |
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| 113 | } |
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| 114 | } |
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| 115 | void result_list_awar_changed_cb(AW_root *awr); |
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| 116 | void selected_group_name_changed_cb(AW_root *awr); |
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| 117 | void selected_group_changed_cb(AW_root *awr); |
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| 118 | void update_resulting_groupname_cb(AW_root *awr); |
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| 119 | |
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| 120 | // callback wrappers: |
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| 121 | static void refresh_result_list_cb(GroupSearch*, GroupUIdata *data) { data->refill_result_list(); } |
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| 122 | static void cleanup_on_exit(GBDATA*, GroupUIdata *data) { data->cleanup(); } |
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| 123 | static void result_order_changed_cb(AW_root *awr, GroupUIdata *data) { data->result_order_changed_cb(awr); } |
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| 124 | static void result_list_awar_changed_cb(AW_root *awr, GroupUIdata *data) { data->result_list_awar_changed_cb(awr); } |
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| 125 | static void selected_group_name_changed_cb(AW_root *awr, GroupUIdata *data) { data->selected_group_name_changed_cb(awr); } |
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| 126 | static void selected_group_changed_cb(AW_root *awr, GroupUIdata *data) { data->selected_group_changed_cb(awr); } |
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| 127 | static void update_resulting_groupname_cb(AW_root *awr, GroupUIdata *data) { data->update_resulting_groupname_cb(awr); } |
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| 128 | |
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| 129 | void install_callbacks(AW_root *awr) { |
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| 130 | awr->awar(AWAR_RESULT_ORDER) ->add_callback(makeRootCallback(GroupUIdata::result_order_changed_cb, this)); |
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| 131 | awr->awar(AWAR_MAYBE_INVALID_GROUP) ->add_callback(makeRootCallback(GroupUIdata::result_list_awar_changed_cb, this)); |
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| 132 | awr->awar(AWAR_SELECTED_GROUP_NAME) ->add_callback(makeRootCallback(GroupUIdata::selected_group_name_changed_cb, this)); |
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| 133 | awr->awar(AWAR_SELECTED_RESULT_GROUP)->add_callback(makeRootCallback(GroupUIdata::selected_group_changed_cb, this)); |
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| 134 | awr->awar(AWAR_RENAME_EXPRESSION) ->add_callback(makeRootCallback(GroupUIdata::update_resulting_groupname_cb, this)); |
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| 135 | } |
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| 136 | void remove_callbacks(AW_root *awr) { |
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| 137 | awr->awar(AWAR_RESULT_ORDER) ->remove_callback(makeRootCallback(GroupUIdata::result_order_changed_cb, this)); |
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| 138 | awr->awar(AWAR_MAYBE_INVALID_GROUP) ->remove_callback(makeRootCallback(GroupUIdata::result_list_awar_changed_cb, this)); |
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| 139 | awr->awar(AWAR_SELECTED_GROUP_NAME) ->remove_callback(makeRootCallback(GroupUIdata::selected_group_name_changed_cb, this)); |
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| 140 | awr->awar(AWAR_SELECTED_RESULT_GROUP)->remove_callback(makeRootCallback(GroupUIdata::selected_group_changed_cb, this)); |
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| 141 | awr->awar(AWAR_RENAME_EXPRESSION) ->remove_callback(makeRootCallback(GroupUIdata::update_resulting_groupname_cb, this)); |
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| 142 | } |
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| 143 | |
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| 144 | public: |
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| 145 | GroupUIdata(GBDATA *gb_main_) : |
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| 146 | gb_main(gb_main_), |
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| 147 | show_tree_name(false), |
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| 148 | result_list(NULp) |
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| 149 | { |
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| 150 | GB_atclose_callback(gb_main, makeDatabaseCallback(GroupUIdata::cleanup_on_exit, this)); |
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| 151 | } |
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| 152 | |
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| 153 | void initialize() { // called after popup |
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| 154 | if (group_search.isNull()) { // avoid reinit if group-search-menu-entry is pressed while group-search-window is still open |
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| 155 | TRACE("initialize GroupUIdata"); |
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| 156 | group_search = new GroupSearch(gb_main, makeGroupSearchCallback(GroupUIdata::refresh_result_list_cb, this)); |
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| 157 | install_callbacks(AW_root::SINGLETON); |
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| 158 | } |
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| 159 | } |
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| 160 | |
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| 161 | GBDATA *get_gb_main() const { return gb_main; } |
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| 162 | |
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| 163 | void announce_result_list(AW_selection_list *result_list_) { result_list = result_list_; } |
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| 164 | void announce_tree_select_list(AW_selection *tree_list_) { tree_list = tree_list_; } |
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| 165 | |
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| 166 | void cleanup() { // called on popdown |
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| 167 | TRACE("cleanup GroupUIdata"); |
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| 168 | remove_callbacks(AW_root::SINGLETON); |
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| 169 | group_search.setNull(); |
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| 170 | clear_result_list(); |
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| 171 | } |
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| 172 | |
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| 173 | void run_search() { |
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| 174 | update_search_filters(); |
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| 175 | update_search_range(); |
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| 176 | update_duplicate_settings(); |
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| 177 | |
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| 178 | { |
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| 179 | AW_root *awr = AW_root::SINGLETON; |
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| 180 | GroupSearchMode mode = GroupSearchMode(awr->awar(AWAR_SEARCH_MODE)->read_int() ^ awr->awar(AWAR_MATCH_MODE)->read_int()); |
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| 181 | group_search->perform_search(mode); |
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| 182 | } |
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| 183 | refill_result_list(); |
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| 184 | } |
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| 185 | |
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| 186 | void refill_result_list(); |
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| 187 | void remove_selected_result(); |
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| 188 | void remove_all_results(); |
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| 189 | void clear_result_list(); |
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| 190 | |
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| 191 | GBDATA *get_selected_group() const { |
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| 192 | AW_scalar awar_value = result_list->get_awar_value(); |
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| 193 | int idx = result_list->get_index_of(awar_value); |
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| 194 | |
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| 195 | return idx == -1 ? NULp : awar_value.get_pointer(); |
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| 196 | } |
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| 197 | |
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| 198 | // modify groups |
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| 199 | void delete_selected_group(); |
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| 200 | void delete_listed_groups(); |
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| 201 | |
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| 202 | void rename_selected_group(); |
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| 203 | void rename_listed_groups(); |
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| 204 | |
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| 205 | void toggle_selected_group_folding(); |
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| 206 | void change_listed_groups_folding(GroupFoldingMode mode); |
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| 207 | |
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| 208 | void mark_species(GroupMarkMode mode); |
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| 209 | }; |
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| 210 | |
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| 211 | void GroupUIdata::clear_result_list() { |
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| 212 | refresh_hit_count(0); |
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| 213 | |
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| 214 | result_list->clear(); |
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| 215 | result_list->insert_default("<none>", (GBDATA*)NULp); |
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| 216 | result_list->update(); |
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| 217 | } |
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| 218 | void GroupUIdata::refill_result_list() { |
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| 219 | const QueriedGroups& foundGroups = group_search->get_results(); |
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| 220 | |
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| 221 | AW_root *awr = AW_root::SINGLETON; |
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| 222 | AW_awar *awar_sel = awr->awar(AWAR_SELECTED_RESULT_GROUP); |
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| 223 | |
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| 224 | if (foundGroups.empty()) { |
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| 225 | clear_result_list(); |
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| 226 | awar_sel->write_pointer(NULp); |
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| 227 | } |
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| 228 | else { |
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| 229 | GB_transaction ta(gb_main); |
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| 230 | |
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| 231 | GBDATA *gb_sellist_group = awr->awar(AWAR_MAYBE_INVALID_GROUP)->read_pointer(); |
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| 232 | bool seen_selected = false; |
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| 233 | |
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| 234 | refresh_hit_count(foundGroups.size()); |
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| 235 | |
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| 236 | result_list->clear(); |
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| 237 | for (FoundGroupCIter g = foundGroups.begin(); g != foundGroups.end(); ++g) { |
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| 238 | const char *display = foundGroups.get_group_display(*g, show_tree_name); |
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| 239 | GBDATA *gb_group = g->get_pointer(); |
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| 240 | |
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| 241 | result_list->insert(display, gb_group); |
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| 242 | |
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| 243 | if (gb_group == gb_sellist_group) seen_selected = true; |
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| 244 | } |
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| 245 | result_list->insert_default("<none>", (GBDATA*)NULp); |
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| 246 | result_list->update(); |
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| 247 | |
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| 248 | awar_sel->rewrite_pointer(seen_selected ? gb_sellist_group : NULp); |
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| 249 | } |
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| 250 | } |
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| 251 | |
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| 252 | void GroupUIdata::update_search_filters() { |
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| 253 | AW_root *awr = AW_root::SINGLETON; |
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| 254 | |
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| 255 | group_search->forgetQExpressions(); |
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| 256 | for (int crit = 1; crit<=MAX_CRITERIA; ++crit) { |
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| 257 | CriterionOperator op = crit == 1 ? CO_OR : CriterionOperator(awr->awar(criterion_awar_name(AWARFORMAT_CRIT_OPERATOR, crit))->read_int()); |
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| 258 | CriterionType type = CriterionType(awr->awar(criterion_awar_name(AWARFORMAT_CRIT_KEY, crit))->read_int()); |
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| 259 | CriterionMatch mtype = CriterionMatch(awr->awar(criterion_awar_name(AWARFORMAT_CRIT_EQUALS, crit))->read_int()); |
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| 260 | const char *expression = awr->awar(criterion_awar_name(AWARFORMAT_CRIT_MATCHES, crit))->read_char_pntr(); |
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| 261 | |
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| 262 | group_search->addQueryExpression(op, type, mtype, expression); |
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| 263 | } |
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| 264 | } |
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| 265 | |
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| 266 | void GroupUIdata::update_search_range() { |
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| 267 | AW_root *awr = AW_root::SINGLETON; |
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| 268 | TreeSearchRange range = TreeSearchRange(awr->awar(AWAR_SEARCH_WHICH_TREES)->read_int()); |
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| 269 | TreeNameSet trees; |
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| 270 | |
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| 271 | switch (range) { |
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| 272 | case SEARCH_ALL_TREES: break; // empty set means "all trees" |
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| 273 | case SEARCH_CURRENT_TREE: { |
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| 274 | const char *currentTree = awr->awar(AWAR_TREE_NAME)->read_char_pntr(); |
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| 275 | if (currentTree[0]) trees.insert(currentTree); |
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| 276 | break; |
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| 277 | } |
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| 278 | case SEARCH_SELECTED_TREES: |
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| 279 | if (tree_list) { |
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| 280 | StrArray tree_names; |
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| 281 | tree_list->get_values(tree_names); |
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| 282 | for (int t = 0; tree_names[t]; ++t) { |
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| 283 | trees.insert(tree_names[t]); |
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| 284 | } |
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| 285 | } |
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| 286 | break; |
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| 287 | } |
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| 288 | if (trees.empty() && range != SEARCH_ALL_TREES) { |
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| 289 | aw_message("No tree selected -> searching all trees instead"); |
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| 290 | } |
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| 291 | group_search->setSearchRange(trees); |
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| 292 | show_tree_name = trees.size() != 1; // (0->all) |
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| 293 | } |
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| 294 | |
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| 295 | void GroupUIdata::update_duplicate_settings() { |
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| 296 | AW_root *awr = AW_root::SINGLETON; |
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| 297 | DuplicateMode dmode = DuplicateMode(awr->awar(AWAR_DUPLICATE_MODE)->read_int()); |
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| 298 | |
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| 299 | if (dmode == DONT_MIND_DUPLICATES) { |
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| 300 | group_search->forgetDupCriteria(); |
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| 301 | } |
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| 302 | else { |
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| 303 | gs_assert(dmode == ONLY_UNIQUE || dmode == ONLY_DUPLICATES); |
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| 304 | |
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| 305 | DupTreeCriterionType treetype = DupTreeCriterionType(awr->awar(AWAR_DUP_TREE_MODE)->read_int()); |
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| 306 | DupNameCriterionType nametype = DupNameCriterionType(awr->awar(AWAR_DUP_NAME_MATCH)->read_int()); |
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| 307 | |
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| 308 | int minClusterSize = awr->awar(AWAR_DUP_MIN_CLUSTER_SIZE)->read_int(); |
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| 309 | bool listDups = dmode == ONLY_DUPLICATES; |
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| 310 | GB_CASE sens = awr->awar(AWAR_DUP_IGNORE_CASE)->read_int() ? GB_IGNORE_CASE : GB_MIND_CASE; |
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| 311 | |
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| 312 | if (nametype == DNC_WHOLENAME) { |
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| 313 | group_search->setDupCriteria(listDups, nametype, sens, treetype, minClusterSize); |
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| 314 | } |
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| 315 | else { |
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| 316 | int minWords = awr->awar(AWAR_DUP_MIN_WORDS)->read_int(); |
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| 317 | const char *excludedWords = awr->awar(AWAR_DUP_EXCLUDED_WORDS)->read_char_pntr(); |
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| 318 | const char *wordSeparators = awr->awar(AWAR_DUP_WORD_SEPARATORS)->read_char_pntr(); |
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| 319 | |
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| 320 | group_search->setDupCriteria(listDups, nametype, sens, minWords, excludedWords, wordSeparators, treetype, minClusterSize); |
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| 321 | } |
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| 322 | } |
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| 323 | } |
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| 324 | |
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| 325 | |
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| 326 | void GroupUIdata::remove_selected_result() { |
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| 327 | int selidx = result_list->get_index_of_selected(); |
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| 328 | if (selidx != -1) { // group is selected |
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| 329 | result_list->move_selection(1); |
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| 330 | result_list->delete_element_at(selidx); |
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| 331 | result_list->update(); |
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| 332 | group_search->remove_hit(selidx); |
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| 333 | } |
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| 334 | } |
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| 335 | void GroupUIdata::remove_all_results() { |
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| 336 | group_search->forget_results(); |
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| 337 | refill_result_list(); |
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| 338 | } |
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| 339 | |
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| 340 | void GroupUIdata::delete_selected_group() { |
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| 341 | int sel = result_list->get_index_of_selected(); |
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| 342 | if (sel != -1) { // group is selected |
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| 343 | result_list->select_default(); // avoid invalid access to group deleted below |
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| 344 | aw_message_if(group_search->delete_group(sel)); |
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| 345 | } |
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| 346 | } |
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| 347 | |
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| 348 | void GroupUIdata::delete_listed_groups() { |
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| 349 | if (group_search->has_results()) { |
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| 350 | result_list->select_default(); // avoid invalid access to group deleted below |
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| 351 | aw_message_if(group_search->delete_found_groups()); |
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| 352 | } |
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| 353 | } |
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| 354 | |
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| 355 | // callback wrappers: |
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| 356 | static void popdown_search_window_cb(AW_window*, GroupUIdata *data) { data->cleanup(); } |
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| 357 | static void runGroupSearch_cb(AW_window*, GroupUIdata *data) { data->run_search(); } |
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| 358 | static void remove_hit_cb(AW_window*, GroupUIdata *data) { data->remove_selected_result(); } |
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| 359 | static void clear_results_cb(AW_window*, GroupUIdata *data) { data->remove_all_results(); } |
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| 360 | static void delete_selected_group_cb(AW_window*, GroupUIdata *data) { data->delete_selected_group(); } |
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| 361 | static void delete_listed_groups_cb(AW_window*, GroupUIdata *data) { data->delete_listed_groups(); } |
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| 362 | static void rename_selected_group_cb(AW_window*, GroupUIdata *data) { data->rename_selected_group(); } |
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| 363 | static void rename_listed_groups_cb(AW_window*, GroupUIdata *data) { data->rename_listed_groups(); } |
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| 364 | static void double_click_group_cb(AW_window*, GroupUIdata *data) { data->toggle_selected_group_folding(); } |
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| 365 | static void listed_groups_folding_cb(AW_window*, GroupUIdata *data, GroupFoldingMode mode) { data->change_listed_groups_folding(mode); } |
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| 366 | static void group_mark_cb(AW_window*, GroupUIdata *data, GroupMarkMode mode) { data->mark_species(mode); } |
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| 367 | |
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| 368 | |
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| 369 | TREE_canvas *NT_get_canvas_showing_tree(const char *tree_name, bool forceDisplay) { |
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| 370 | // search whether any canvas shows the tree 'tree_name'. |
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| 371 | // if yes -> return that canvas |
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| 372 | // if no -> if forceDisplay==false -> return NULp |
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| 373 | // else -> search first visible canvas + switch tree -> return that canvas |
|---|
| 374 | |
|---|
| 375 | TREE_canvas *ntw = NULp; |
|---|
| 376 | { |
|---|
| 377 | TREE_canvas *first_vis = NULp; |
|---|
| 378 | |
|---|
| 379 | for (int ci = 0; ci<MAX_NT_WINDOWS && !ntw; ++ci) { |
|---|
| 380 | TREE_canvas *tc = NT_get_canvas_by_index(ci); |
|---|
| 381 | if (tc && tc->is_shown()) { // @@@ does not detect iconified windows |
|---|
| 382 | if (!first_vis) first_vis = tc; |
|---|
| 383 | if (strcmp(tc->get_awar_tree()->read_char_pntr(), tree_name) == 0) ntw = tc; |
|---|
| 384 | } |
|---|
| 385 | } |
|---|
| 386 | |
|---|
| 387 | if (!ntw && forceDisplay) { |
|---|
| 388 | if (!first_vis) { |
|---|
| 389 | first_vis = NT_get_canvas_by_index(0); |
|---|
| 390 | first_vis->aww->activate(); // popup first (if all windows hidden) |
|---|
| 391 | } |
|---|
| 392 | ntw = first_vis; |
|---|
| 393 | nt_assert(ntw); |
|---|
| 394 | ntw->get_awar_tree()->write_string(tree_name); |
|---|
| 395 | } |
|---|
| 396 | } |
|---|
| 397 | |
|---|
| 398 | return ntw; |
|---|
| 399 | } |
|---|
| 400 | |
|---|
| 401 | static TREE_canvas *get_canvas_able_to_show(GBDATA *gb_group) { |
|---|
| 402 | // detect tree containing group |
|---|
| 403 | // + use NT_get_canvas_showing_tree to force display of that tree |
|---|
| 404 | |
|---|
| 405 | TREE_canvas *ntw = NULp; |
|---|
| 406 | { |
|---|
| 407 | GB_transaction ta(gb_group); |
|---|
| 408 | |
|---|
| 409 | GBDATA *gb_tree = GB_get_father(gb_group); |
|---|
| 410 | char *tree_name = GB_read_key(gb_tree); |
|---|
| 411 | |
|---|
| 412 | ntw = NT_get_canvas_showing_tree(tree_name, true); // forces display of 'tree_name' |
|---|
| 413 | |
|---|
| 414 | free(tree_name); |
|---|
| 415 | } |
|---|
| 416 | |
|---|
| 417 | return ntw; |
|---|
| 418 | } |
|---|
| 419 | |
|---|
| 420 | static bool inside_group_selection = false; |
|---|
| 421 | |
|---|
| 422 | void GroupUIdata::result_list_awar_changed_cb(AW_root *awr) { |
|---|
| 423 | LocallyModify<bool> avoid_recursion(inside_group_selection, true); |
|---|
| 424 | |
|---|
| 425 | GBDATA *gb_group = awr->awar(AWAR_MAYBE_INVALID_GROUP)->read_pointer(); |
|---|
| 426 | TRACE(GBS_global_string("result_list_awar_changed_cb to %p", gb_group)); |
|---|
| 427 | |
|---|
| 428 | if (gb_group) { |
|---|
| 429 | TREE_canvas *ntw = get_canvas_able_to_show(gb_group); |
|---|
| 430 | |
|---|
| 431 | GB_transaction ta(gb_group); |
|---|
| 432 | ntw->get_graphic_tree()->select_group(gb_group); |
|---|
| 433 | |
|---|
| 434 | awr->awar(AWAR_SELECTED_RESULT_GROUP)->rewrite_pointer(get_selected_group()); |
|---|
| 435 | } |
|---|
| 436 | else { |
|---|
| 437 | // @@@ why need extra refresh here? |
|---|
| 438 | // @@@ does not auto-fold |
|---|
| 439 | // both should be handled by deselect_group?! |
|---|
| 440 | TREE_canvas *ntw = NT_get_canvas_by_index(0); // use any canvas here |
|---|
| 441 | AWT_auto_refresh force(ntw); |
|---|
| 442 | ntw->get_graphic_tree()->deselect_group(); |
|---|
| 443 | ntw->request_refresh(); |
|---|
| 444 | |
|---|
| 445 | awr->awar(AWAR_SELECTED_RESULT_GROUP)->rewrite_pointer(NULp); |
|---|
| 446 | } |
|---|
| 447 | } |
|---|
| 448 | |
|---|
| 449 | static void selected_group_changed_by_canvas_cb(AW_root *awr) { |
|---|
| 450 | if (!inside_group_selection) { |
|---|
| 451 | LocallyModify<bool> avoid_recursion(inside_group_selection, true); |
|---|
| 452 | |
|---|
| 453 | GBDATA *gb_group = awr->awar(AWAR_GROUP)->read_pointer(); |
|---|
| 454 | TRACE(GBS_global_string("selected_group_changed_by_canvas_cb to %p", gb_group)); |
|---|
| 455 | if (gb_group) { |
|---|
| 456 | awr->awar(AWAR_MAYBE_INVALID_GROUP)->write_pointer(gb_group); |
|---|
| 457 | } |
|---|
| 458 | } |
|---|
| 459 | } |
|---|
| 460 | |
|---|
| 461 | static bool nameChangedByGroupChange = false; |
|---|
| 462 | |
|---|
| 463 | void GroupUIdata::selected_group_changed_cb(AW_root *awr) { |
|---|
| 464 | GBDATA *gb_group = awr->awar(AWAR_SELECTED_RESULT_GROUP)->read_pointer(); |
|---|
| 465 | TRACE(GBS_global_string("selected_group_changed_cb to %p", gb_group)); |
|---|
| 466 | |
|---|
| 467 | LocallyModify<bool> ignoreNameChange(nameChangedByGroupChange, true); |
|---|
| 468 | |
|---|
| 469 | const char *name = ""; |
|---|
| 470 | if (gb_group) { |
|---|
| 471 | GB_transaction ta(gb_group); |
|---|
| 472 | name = FoundGroup(gb_group).get_name(); |
|---|
| 473 | } |
|---|
| 474 | awr->awar(AWAR_SELECTED_GROUP_NAME)->write_string(name); |
|---|
| 475 | // ensure update of rename-result even if a group-change did NOT change the name (because both groups have same name) |
|---|
| 476 | update_resulting_groupname_cb(awr); |
|---|
| 477 | } |
|---|
| 478 | |
|---|
| 479 | void GroupUIdata::update_resulting_groupname_cb(AW_root *awr) { |
|---|
| 480 | TRACE("update_resulting_groupname_cb"); |
|---|
| 481 | |
|---|
| 482 | char *curr_name = awr->awar(AWAR_SELECTED_GROUP_NAME)->read_string(); |
|---|
| 483 | char *acisrt = awr->awar(AWAR_RENAME_EXPRESSION)->read_string(); |
|---|
| 484 | |
|---|
| 485 | ARB_ERROR error; |
|---|
| 486 | int idx = result_list->get_index_of_selected(); |
|---|
| 487 | char *result = GS_calc_resulting_groupname(gb_main, group_search->get_results(), idx, curr_name, acisrt, error); |
|---|
| 488 | |
|---|
| 489 | if (result) { |
|---|
| 490 | error.expect_no_error(); |
|---|
| 491 | if (!result[0]) { // empty result (will be skipped in batch-rename) |
|---|
| 492 | result = strdup("<empty result> => group would be skipped in batch-rename"); |
|---|
| 493 | } |
|---|
| 494 | } |
|---|
| 495 | else { |
|---|
| 496 | result = strdup(error.deliver()); // show error in result field |
|---|
| 497 | } |
|---|
| 498 | awr->awar(AWAR_RESULTING_GROUP_NAME)->write_string(result); |
|---|
| 499 | |
|---|
| 500 | free(result); |
|---|
| 501 | free(acisrt); |
|---|
| 502 | free(curr_name); |
|---|
| 503 | } |
|---|
| 504 | |
|---|
| 505 | void GroupUIdata::selected_group_name_changed_cb(AW_root *awr) { |
|---|
| 506 | if (!nameChangedByGroupChange) { |
|---|
| 507 | GB_ERROR error = NULp; |
|---|
| 508 | AW_awar *awar_selected_result = awr->awar(AWAR_SELECTED_RESULT_GROUP); |
|---|
| 509 | GBDATA *gb_group = awar_selected_result->read_pointer(); |
|---|
| 510 | |
|---|
| 511 | if (!gb_group) error = "select a group to rename it"; |
|---|
| 512 | else { |
|---|
| 513 | char *new_name = GBS_trim(awr->awar(AWAR_SELECTED_GROUP_NAME)->read_char_pntr()); |
|---|
| 514 | if (!new_name[0]) error = "empty group name not allowed"; |
|---|
| 515 | else { |
|---|
| 516 | GB_transaction ta(gb_group); |
|---|
| 517 | error = GBT_write_name_to_groupData(gb_group, false, new_name, true); |
|---|
| 518 | } |
|---|
| 519 | } |
|---|
| 520 | |
|---|
| 521 | if (error) { |
|---|
| 522 | aw_message(error); |
|---|
| 523 | awar_selected_result->touch(); // refill groupname inputfield |
|---|
| 524 | } |
|---|
| 525 | } |
|---|
| 526 | } |
|---|
| 527 | |
|---|
| 528 | void GroupUIdata::rename_selected_group() { |
|---|
| 529 | int sel = result_list->get_index_of_selected(); |
|---|
| 530 | if (sel != -1) { // group is selected |
|---|
| 531 | const char *acisrt = AW_root::SINGLETON->awar(AWAR_RENAME_EXPRESSION)->read_char_pntr(); |
|---|
| 532 | aw_message_if(group_search->rename_group(sel, acisrt).deliver()); |
|---|
| 533 | // Note: no refresh needed here (triggered by taxonomy callbacks) |
|---|
| 534 | } |
|---|
| 535 | } |
|---|
| 536 | |
|---|
| 537 | void GroupUIdata::rename_listed_groups() { |
|---|
| 538 | if (group_search.isNull()) { |
|---|
| 539 | aw_message("Please rerun group search"); |
|---|
| 540 | return; |
|---|
| 541 | } |
|---|
| 542 | if (group_search->has_results()) { |
|---|
| 543 | const char *acisrt = AW_root::SINGLETON->awar(AWAR_RENAME_EXPRESSION)->read_char_pntr(); |
|---|
| 544 | aw_message_if(group_search->rename_found_groups(acisrt).deliver()); |
|---|
| 545 | // Note: no refresh needed here (triggered by taxonomy callbacks) |
|---|
| 546 | } |
|---|
| 547 | } |
|---|
| 548 | |
|---|
| 549 | void GroupUIdata::toggle_selected_group_folding() { |
|---|
| 550 | int sel = result_list->get_index_of_selected(); |
|---|
| 551 | if (sel != -1) { // group is selected |
|---|
| 552 | ARB_ERROR error = group_search->fold_group(sel, GFM_TOGGLE); |
|---|
| 553 | aw_message_if(error); |
|---|
| 554 | if (!error) AW_root::SINGLETON->awar(AWAR_GROUP)->touch(); // trigger recenter + refresh of changed group |
|---|
| 555 | } |
|---|
| 556 | } |
|---|
| 557 | |
|---|
| 558 | void GroupUIdata::change_listed_groups_folding(GroupFoldingMode foldmode) { |
|---|
| 559 | if (group_search->has_results() || (foldmode & GFM_COLLAPSE_REST)) { |
|---|
| 560 | ARB_ERROR error = group_search->fold_found_groups(foldmode); |
|---|
| 561 | aw_message_if(error); |
|---|
| 562 | if (!error) { |
|---|
| 563 | AW_root::SINGLETON->awar(AWAR_GROUP)->write_pointer(NULp); // deselect group (otherwise wont fold subtree containing selected) |
|---|
| 564 | AW_root::SINGLETON->awar(AWAR_TREE_REFRESH)->touch(); // force expose of all trees (triggers reload if DB-changes) |
|---|
| 565 | } |
|---|
| 566 | } |
|---|
| 567 | } |
|---|
| 568 | |
|---|
| 569 | enum GroupMarkTarget { |
|---|
| 570 | GMT_ALL_SPECIES, // targets all species in DB |
|---|
| 571 | GMT_SELECTED_GROUP, // targets all species contained in SELECTED group |
|---|
| 572 | GMT_ANY_GROUP, // targets all species contained in ANY listed group |
|---|
| 573 | GMT_ALL_GROUPS, // targets all species contained in ALL listed groups |
|---|
| 574 | }; |
|---|
| 575 | |
|---|
| 576 | void GroupUIdata::mark_species(GroupMarkMode mode) { |
|---|
| 577 | GroupMarkTarget target = GroupMarkTarget(AW_root::SINGLETON->awar(AWAR_MARK_TARGET)->read_int()); |
|---|
| 578 | bool anyGroup = false; |
|---|
| 579 | ARB_ERROR error; |
|---|
| 580 | GB_transaction ta(gb_main); |
|---|
| 581 | |
|---|
| 582 | switch (target) { |
|---|
| 583 | case GMT_ALL_SPECIES: |
|---|
| 584 | GBT_mark_all(gb_main, int(mode)); |
|---|
| 585 | break; |
|---|
| 586 | |
|---|
| 587 | case GMT_SELECTED_GROUP: { |
|---|
| 588 | int sel = result_list->get_index_of_selected(); |
|---|
| 589 | if (sel != -1) { |
|---|
| 590 | error = group_search->set_marks_in_group(sel, mode); |
|---|
| 591 | } |
|---|
| 592 | else { |
|---|
| 593 | error = "Please select a group"; |
|---|
| 594 | } |
|---|
| 595 | |
|---|
| 596 | break; |
|---|
| 597 | } |
|---|
| 598 | case GMT_ANY_GROUP: |
|---|
| 599 | anyGroup = true; |
|---|
| 600 | // fall-through |
|---|
| 601 | case GMT_ALL_GROUPS: |
|---|
| 602 | if (group_search->has_results()) { |
|---|
| 603 | error = group_search->set_marks_in_found_groups(mode, anyGroup ? UNITE : INTERSECT); |
|---|
| 604 | } |
|---|
| 605 | else { |
|---|
| 606 | error = "No results listed"; |
|---|
| 607 | } |
|---|
| 608 | break; |
|---|
| 609 | } |
|---|
| 610 | |
|---|
| 611 | error = ta.close(error); |
|---|
| 612 | aw_message_if(error.deliver()); |
|---|
| 613 | } |
|---|
| 614 | |
|---|
| 615 | void create_group_search_awars(AW_root *aw_root, AW_default props) { |
|---|
| 616 | aw_root->awar_pointer(AWAR_MAYBE_INVALID_GROUP, NULp, props); |
|---|
| 617 | aw_root->awar_pointer(AWAR_SELECTED_RESULT_GROUP, NULp, props); |
|---|
| 618 | |
|---|
| 619 | CriterionType deftype[MAX_CRITERIA] = { |
|---|
| 620 | CT_NAME, |
|---|
| 621 | CT_SIZE, |
|---|
| 622 | CT_MARKED_PC, |
|---|
| 623 | }; |
|---|
| 624 | |
|---|
| 625 | for (int crit = 1; crit<=MAX_CRITERIA; ++crit) { |
|---|
| 626 | if (crit>1) { |
|---|
| 627 | aw_root->awar_int(criterion_awar_name(AWARFORMAT_CRIT_OPERATOR, crit), CO_IGNORE, props); |
|---|
| 628 | } |
|---|
| 629 | aw_root->awar_int (criterion_awar_name(AWARFORMAT_CRIT_KEY, crit), deftype[crit-1], props); |
|---|
| 630 | aw_root->awar_int (criterion_awar_name(AWARFORMAT_CRIT_EQUALS, crit), CM_MATCH, props); |
|---|
| 631 | aw_root->awar_string(criterion_awar_name(AWARFORMAT_CRIT_MATCHES, crit), crit == 1 ? "*" : "", props); |
|---|
| 632 | } |
|---|
| 633 | |
|---|
| 634 | aw_root->awar_string(AWAR_SELECTED_GROUP_NAME, "", props); |
|---|
| 635 | aw_root->awar_string(AWAR_RENAME_EXPRESSION, "", props); |
|---|
| 636 | aw_root->awar_string(AWAR_RESULTING_GROUP_NAME, "???", props); |
|---|
| 637 | aw_root->awar_string(AWAR_TREE_SELECTED, "", props); |
|---|
| 638 | |
|---|
| 639 | aw_root->awar_string(AWAR_DUP_EXCLUDED_WORDS, |
|---|
| 640 | "and or" |
|---|
| 641 | " branch group clade subsection" |
|---|
| 642 | " order family genus" |
|---|
| 643 | " incertae sedis" |
|---|
| 644 | " other unknown unclassified miscellaneous" |
|---|
| 645 | , props); |
|---|
| 646 | aw_root->awar_string(AWAR_DUP_WORD_SEPARATORS, ",; /()[]_", props); |
|---|
| 647 | |
|---|
| 648 | aw_root->awar_int(AWAR_GROUP_HIT_COUNT, 0, props); |
|---|
| 649 | aw_root->awar_int(AWAR_SEARCH_WHICH_TREES, SEARCH_CURRENT_TREE, props); |
|---|
| 650 | aw_root->awar_int(AWAR_SEARCH_MODE, GSM_FIND, props); |
|---|
| 651 | aw_root->awar_int(AWAR_MATCH_MODE, GSM_MATCH, props); |
|---|
| 652 | aw_root->awar_int(AWAR_DUPLICATE_MODE, DONT_MIND_DUPLICATES, props); |
|---|
| 653 | aw_root->awar_int(AWAR_DUP_TREE_MODE, DLC_SAME_TREE, props); |
|---|
| 654 | aw_root->awar_int(AWAR_DUP_MIN_CLUSTER_SIZE, 2, props)->set_min(2); |
|---|
| 655 | aw_root->awar_int(AWAR_DUP_NAME_MATCH, DNC_WHOLENAME, props); |
|---|
| 656 | aw_root->awar_int(AWAR_DUP_IGNORE_CASE, 1, props); |
|---|
| 657 | aw_root->awar_int(AWAR_DUP_MIN_WORDS, 2, props)->set_min(1); |
|---|
| 658 | aw_root->awar_int(AWAR_RESULT_ORDER, GSC_NONE, props); |
|---|
| 659 | aw_root->awar_int(AWAR_MARK_TARGET, GMT_SELECTED_GROUP, props); |
|---|
| 660 | |
|---|
| 661 | // perma-callbacks: |
|---|
| 662 | aw_root->awar(AWAR_GROUP) ->add_callback(selected_group_changed_by_canvas_cb); |
|---|
| 663 | // more callbacks are installed above in .@install_callbacks |
|---|
| 664 | } |
|---|
| 665 | |
|---|
| 666 | static AW_window *create_tree_select_window_cb(AW_root *aw_root, GroupUIdata *data) { |
|---|
| 667 | AW_window_simple *aws = new AW_window_simple; |
|---|
| 668 | |
|---|
| 669 | aw_root->awar(AWAR_SEARCH_WHICH_TREES)->write_int(SEARCH_SELECTED_TREES); // switch target-range to 'selected trees' |
|---|
| 670 | |
|---|
| 671 | aws->init(aw_root, "GROUP_TREES", "Select trees to search"); |
|---|
| 672 | aws->load_xfig("group_trees.fig"); |
|---|
| 673 | |
|---|
| 674 | aws->callback(AW_POPDOWN); |
|---|
| 675 | aws->at("close"); |
|---|
| 676 | aws->create_button("CLOSE", "CLOSE", "C"); |
|---|
| 677 | |
|---|
| 678 | aws->callback(makeHelpCallback("group_trees.hlp")); |
|---|
| 679 | aws->at("help"); |
|---|
| 680 | aws->create_button("HELP", "HELP", "H"); |
|---|
| 681 | |
|---|
| 682 | aws->at("list"); |
|---|
| 683 | AW_DB_selection *all_trees = awt_create_TREE_selection_list(data->get_gb_main(), aws, AWAR_TREE_SELECTED); |
|---|
| 684 | AW_selection *selected_trees = awt_create_subset_selection_list(aws, all_trees->get_sellist(), "selected", "add", "sort"); |
|---|
| 685 | |
|---|
| 686 | data->announce_tree_select_list(selected_trees); |
|---|
| 687 | |
|---|
| 688 | return aws; |
|---|
| 689 | } |
|---|
| 690 | |
|---|
| 691 | static AW_window *create_group_rename_window_cb(AW_root *awr, GroupUIdata *data) { |
|---|
| 692 | AW_window_simple *aws = new AW_window_simple; |
|---|
| 693 | aws->init(awr, "RENAME_GROUPS", "Rename taxonomic groups"); |
|---|
| 694 | |
|---|
| 695 | const int PAD = 10; |
|---|
| 696 | |
|---|
| 697 | aws->at(PAD, PAD); |
|---|
| 698 | aws->auto_space(PAD/2, PAD/2); |
|---|
| 699 | |
|---|
| 700 | aws->button_length(7); |
|---|
| 701 | |
|---|
| 702 | aws->callback(AW_POPDOWN); |
|---|
| 703 | aws->create_button("CLOSE", "Close", "C"); |
|---|
| 704 | |
|---|
| 705 | aws->at_shift(450, 0); // defines minimum window width |
|---|
| 706 | |
|---|
| 707 | aws->at_attach(-PAD, 0); |
|---|
| 708 | aws->callback(makeHelpCallback("group_rename.hlp")); |
|---|
| 709 | aws->create_button("HELP", "Help", "H"); |
|---|
| 710 | aws->at_unattach(); |
|---|
| 711 | |
|---|
| 712 | const int IF_YSIZE = 32; // lineheight of attached input field |
|---|
| 713 | |
|---|
| 714 | const int LABEL_LENGTH = 27; |
|---|
| 715 | const int FIELD_LENGTH = 40; // startup-length (chars) |
|---|
| 716 | |
|---|
| 717 | aws->label_length(LABEL_LENGTH); |
|---|
| 718 | |
|---|
| 719 | aws->at_newline(); |
|---|
| 720 | int sy = aws->get_at_yposition(); |
|---|
| 721 | |
|---|
| 722 | aws->at_attach_to(true, false, -PAD, IF_YSIZE); |
|---|
| 723 | aws->label("Selected group name:"); |
|---|
| 724 | aws->create_input_field(AWAR_SELECTED_GROUP_NAME, FIELD_LENGTH); |
|---|
| 725 | |
|---|
| 726 | aws->at_newline(); |
|---|
| 727 | int inputlineHeight = aws->get_at_yposition()-sy; |
|---|
| 728 | |
|---|
| 729 | aws->at_attach_to(true, false, -PAD, IF_YSIZE); |
|---|
| 730 | aws->label("Modify using ACI/SRT:"); |
|---|
| 731 | aws->create_input_field(AWAR_RENAME_EXPRESSION, FIELD_LENGTH); |
|---|
| 732 | aws->at_unattach(); |
|---|
| 733 | |
|---|
| 734 | aws->at_newline(); |
|---|
| 735 | int rx, ry; |
|---|
| 736 | aws->get_at_position(&rx, &ry); |
|---|
| 737 | aws->at_shift(0, inputlineHeight); // reserve space for "Resulting group name" |
|---|
| 738 | |
|---|
| 739 | int by = aws->get_at_yposition(); |
|---|
| 740 | aws->at_attach(0, -PAD); |
|---|
| 741 | aws->callback(makeWindowCallback(rename_selected_group_cb, data)); |
|---|
| 742 | aws->create_autosize_button("SELECTED", "Apply to\nselected group"); |
|---|
| 743 | aws->at_attach(0, -PAD); |
|---|
| 744 | aws->callback(makeWindowCallback(rename_listed_groups_cb, data)); |
|---|
| 745 | aws->create_autosize_button("LISTED", "Apply to all\nlisted groups"); |
|---|
| 746 | aws->at_unattach(); |
|---|
| 747 | |
|---|
| 748 | aws->at_newline(); |
|---|
| 749 | int bheight = aws->get_at_yposition()-by; |
|---|
| 750 | |
|---|
| 751 | aws->at(rx, ry); |
|---|
| 752 | aws->at_attach_to(true, true, -PAD, -(PAD+bheight)); |
|---|
| 753 | aws->label("Resulting group name:"); |
|---|
| 754 | aws->create_button(NULp, AWAR_RESULTING_GROUP_NAME, NULp, "+"); |
|---|
| 755 | aws->at_unattach(); |
|---|
| 756 | |
|---|
| 757 | aws->window_fit(); |
|---|
| 758 | |
|---|
| 759 | return aws; |
|---|
| 760 | } |
|---|
| 761 | |
|---|
| 762 | static AW_window *create_dup_config_window_cb(AW_root *awr) { |
|---|
| 763 | AW_window_simple *aws = new AW_window_simple; |
|---|
| 764 | aws->init(awr, "DUP_CONFIG", "Configure group duplicate search"); |
|---|
| 765 | |
|---|
| 766 | const int PAD = 10; |
|---|
| 767 | const int IF_YSIZE = 32; // lineheight of attached input field |
|---|
| 768 | |
|---|
| 769 | aws->at(PAD, PAD); |
|---|
| 770 | aws->auto_space(PAD/2, PAD/2); |
|---|
| 771 | |
|---|
| 772 | aws->button_length(7); |
|---|
| 773 | |
|---|
| 774 | aws->callback(AW_POPDOWN); |
|---|
| 775 | aws->create_button("CLOSE", "Close", "C"); |
|---|
| 776 | |
|---|
| 777 | const int LONG_LABEL_LENGTH = 30; |
|---|
| 778 | const int SHORT_LABEL_LENGTH = 15; |
|---|
| 779 | const int LONG_FIELD_LENGTH = 40; // used for string input field |
|---|
| 780 | const int SHORT_FIELD_LENGTH = 7; // used for numeric input fields |
|---|
| 781 | |
|---|
| 782 | aws->label_length(LONG_LABEL_LENGTH); |
|---|
| 783 | |
|---|
| 784 | aws->at_newline(); |
|---|
| 785 | aws->label("Min. size of duplicate cluster:"); |
|---|
| 786 | aws->create_input_field(AWAR_DUP_MIN_CLUSTER_SIZE, SHORT_FIELD_LENGTH); |
|---|
| 787 | |
|---|
| 788 | aws->at_newline(); |
|---|
| 789 | aws->label("Search duplicates"); |
|---|
| 790 | aws->create_option_menu(AWAR_DUP_TREE_MODE); |
|---|
| 791 | aws->insert_default_option("inside same tree", "s", DLC_SAME_TREE); |
|---|
| 792 | aws->insert_option ("in different trees", "d", DLC_DIFF_TREE); |
|---|
| 793 | aws->insert_option ("anywhere", "a", DLC_ANYWHERE); |
|---|
| 794 | aws->update_option_menu(); |
|---|
| 795 | |
|---|
| 796 | aws->at_newline(); |
|---|
| 797 | aws->label("Ignore case?"); |
|---|
| 798 | aws->create_toggle(AWAR_DUP_IGNORE_CASE); |
|---|
| 799 | |
|---|
| 800 | aws->at_newline(); |
|---|
| 801 | aws->create_toggle_field(AWAR_DUP_NAME_MATCH, "Duplicates are names that"); |
|---|
| 802 | aws->insert_default_toggle("match whole name", "n", DNC_WHOLENAME); |
|---|
| 803 | aws->insert_toggle ("match wordwise", "w", DNC_WORDWISE); |
|---|
| 804 | aws->update_toggle_field(); |
|---|
| 805 | |
|---|
| 806 | aws->at_newline(); |
|---|
| 807 | aws->label("Min. number of matching words"); |
|---|
| 808 | aws->create_input_field(AWAR_DUP_MIN_WORDS, SHORT_FIELD_LENGTH); |
|---|
| 809 | |
|---|
| 810 | aws->at_newline(); |
|---|
| 811 | aws->label("Word separators"); |
|---|
| 812 | aws->create_input_field(AWAR_DUP_WORD_SEPARATORS, 2*SHORT_FIELD_LENGTH); |
|---|
| 813 | |
|---|
| 814 | aws->at_newline(); |
|---|
| 815 | aws->label_length(SHORT_LABEL_LENGTH); |
|---|
| 816 | aws->at_attach_to(true, false, -PAD, IF_YSIZE); |
|---|
| 817 | aws->label("Ignored words"); |
|---|
| 818 | aws->create_input_field(AWAR_DUP_EXCLUDED_WORDS, LONG_FIELD_LENGTH); |
|---|
| 819 | |
|---|
| 820 | aws->window_fit(); |
|---|
| 821 | return aws; |
|---|
| 822 | } |
|---|
| 823 | |
|---|
| 824 | static AWT_config_mapping_def group_search_config_mapping[] = { |
|---|
| 825 | { AWAR_SEARCH_WHICH_TREES, "searched_trees" }, |
|---|
| 826 | { AWAR_SEARCH_MODE, "search_mode" }, |
|---|
| 827 | { AWAR_MATCH_MODE, "match_mode" }, |
|---|
| 828 | |
|---|
| 829 | { AWAR_DUPLICATE_MODE, "dup_mode" }, |
|---|
| 830 | { AWAR_DUP_TREE_MODE, "dup_tree_mode" }, |
|---|
| 831 | { AWAR_DUP_MIN_CLUSTER_SIZE, "dup_min_size" }, |
|---|
| 832 | { AWAR_DUP_NAME_MATCH, "dup_match_mode" }, |
|---|
| 833 | { AWAR_DUP_IGNORE_CASE, "dup_ignore_case" }, |
|---|
| 834 | { AWAR_DUP_MIN_WORDS, "dup_min_words" }, |
|---|
| 835 | { AWAR_DUP_EXCLUDED_WORDS, "dup_excluded_words" }, |
|---|
| 836 | { AWAR_DUP_WORD_SEPARATORS, "dup_word_separators" }, |
|---|
| 837 | |
|---|
| 838 | { AWAR_MARK_TARGET, "mark_target" }, |
|---|
| 839 | { AWAR_RENAME_EXPRESSION, "rename_script" }, |
|---|
| 840 | |
|---|
| 841 | { NULp, NULp }, |
|---|
| 842 | }; |
|---|
| 843 | |
|---|
| 844 | static void create_search_config_setup_cb(AWT_config_definition& def) { |
|---|
| 845 | def.add(group_search_config_mapping); // fixed parameters |
|---|
| 846 | |
|---|
| 847 | for (int crit = 1; crit<=MAX_CRITERIA; ++crit) { |
|---|
| 848 | if (crit>1) { |
|---|
| 849 | def.add(criterion_awar_name(AWARFORMAT_CRIT_OPERATOR, crit), "op", crit); |
|---|
| 850 | } |
|---|
| 851 | def.add(criterion_awar_name(AWARFORMAT_CRIT_KEY, crit), "sel", crit); |
|---|
| 852 | def.add(criterion_awar_name(AWARFORMAT_CRIT_EQUALS, crit), "eq", crit); |
|---|
| 853 | def.add(criterion_awar_name(AWARFORMAT_CRIT_MATCHES, crit), "expr", crit); |
|---|
| 854 | } |
|---|
| 855 | } |
|---|
| 856 | |
|---|
| 857 | static AWT_predefined_config predefined_group_search[] = { |
|---|
| 858 | { "*tagged_find", "Search expression for \"tagged\" groupnames", "dup_mode='0';eq1='0';expr1='*[*]*';match_mode='0';op2='2';op3='2';sel1='0'" }, |
|---|
| 859 | { "*tags_remove_all", "Expression for batch-rename:\n- removes any prefix(es) in \"[..]\" from groupnames", "rename_script='/\\\\[.*\\\\]//'" }, |
|---|
| 860 | { "*tag_prefix", "Expression for batch-rename:\n- adds prefix \"[TAG] \" to groupnames", "rename_script='\"[TAG] \";dd'" }, |
|---|
| 861 | { "*swap_AND_names", "Batch-rename:\n \"X and Y\" -> \"Y and X\"\n \"X, Y and Z\" -> \"Z, X and Y\" ...", "rename_script=':* and *=*2 and *1:* and *, *=*1, *2 and *3:*, * and *, *=*1, *2, *3 and *4'" }, |
|---|
| 862 | { "*rename_enumerated", "Batch-rename:\n- appends running number to group-name\n (using duplicate search + hitlist order)", "dup_mode='1';rename_script='dd;\"~\";dupidx|merge|srt(~~=~)'" }, |
|---|
| 863 | { "*remove_numeric_suffix", "Batch-rename:\n- removes numeric suffixes \n like \"~1\", \"~003\"", "rename_script='/~[0-9]+$//'" }, |
|---|
| 864 | |
|---|
| 865 | { "*undo_groupXfer_report", "undo group rename applied by \"Move groups\":\n * remove prefix \"XFRD_\"\n * remove penalty suffix", "rename_script='command(\"/^XFRD_//\")|command(\"/\\\\\\\\{penalty.*\\\\\\\\}$//\")'" }, |
|---|
| 866 | |
|---|
| 867 | { NULp, NULp, NULp } |
|---|
| 868 | }; |
|---|
| 869 | |
|---|
| 870 | void popup_group_search_window(AW_window *aw_parent, GBDATA *gb_main) { |
|---|
| 871 | static AW_window *awgs = NULp; |
|---|
| 872 | static GroupUIdata data(gb_main); |
|---|
| 873 | |
|---|
| 874 | data.initialize(); |
|---|
| 875 | |
|---|
| 876 | if (!awgs) { |
|---|
| 877 | AW_window_simple *aws = new AW_window_simple; |
|---|
| 878 | AW_root *aw_root = aw_parent->get_root(); |
|---|
| 879 | |
|---|
| 880 | aws->init(aw_root, "GROUP_SEARCH", "Search taxonomic groups"); |
|---|
| 881 | aws->load_xfig("group_search.fig"); |
|---|
| 882 | |
|---|
| 883 | aws->button_length(7); |
|---|
| 884 | |
|---|
| 885 | aws->at("close"); |
|---|
| 886 | aws->callback(AW_POPDOWN); |
|---|
| 887 | aws->create_button("CLOSE", "Close", "C"); |
|---|
| 888 | |
|---|
| 889 | aws->at("help"); |
|---|
| 890 | aws->callback(makeHelpCallback("group_search.hlp")); |
|---|
| 891 | aws->create_button("HELP", "Help", "H"); |
|---|
| 892 | |
|---|
| 893 | aws->at("config"); |
|---|
| 894 | AWT_insert_config_manager(aws, AW_ROOT_DEFAULT, "group_search", makeConfigSetupCallback(create_search_config_setup_cb), NULp, predefined_group_search); |
|---|
| 895 | |
|---|
| 896 | aws->at("trees"); |
|---|
| 897 | aws->create_option_menu(AWAR_SEARCH_WHICH_TREES); |
|---|
| 898 | aws->insert_default_option("current tree", "c", SEARCH_CURRENT_TREE); |
|---|
| 899 | aws->insert_option ("selected trees", "s", SEARCH_SELECTED_TREES); |
|---|
| 900 | aws->insert_option ("all trees", "a", SEARCH_ALL_TREES); |
|---|
| 901 | aws->update_option_menu(); |
|---|
| 902 | |
|---|
| 903 | aws->at("select"); |
|---|
| 904 | aws->callback(makeCreateWindowCallback(create_tree_select_window_cb, &data)); |
|---|
| 905 | aws->create_autosize_button("select_trees", "(select)"); |
|---|
| 906 | |
|---|
| 907 | aws->at("mode"); |
|---|
| 908 | aws->create_option_menu(AWAR_SEARCH_MODE); |
|---|
| 909 | aws->insert_default_option("list", "l", GSM_FIND); |
|---|
| 910 | aws->insert_option ("add", "a", GSM_ADD); |
|---|
| 911 | aws->insert_option ("keep", "k", GSM_KEEP); |
|---|
| 912 | aws->insert_option ("remove", "r", GSM_REMOVE); |
|---|
| 913 | aws->update_option_menu(); |
|---|
| 914 | |
|---|
| 915 | aws->at("not"); |
|---|
| 916 | aws->create_option_menu(AWAR_MATCH_MODE); |
|---|
| 917 | aws->insert_default_option("match", "m", GSM_MATCH); |
|---|
| 918 | aws->insert_option ("don't match", "d", GSM_MISMATCH); |
|---|
| 919 | aws->update_option_menu(); |
|---|
| 920 | |
|---|
| 921 | aws->at("dups"); |
|---|
| 922 | aws->create_option_menu(AWAR_DUPLICATE_MODE); |
|---|
| 923 | aws->insert_default_option("No", "n", DONT_MIND_DUPLICATES); |
|---|
| 924 | aws->insert_option ("duplicate groups only", "d", ONLY_DUPLICATES); |
|---|
| 925 | aws->insert_option ("unique groups only", "u", ONLY_UNIQUE); |
|---|
| 926 | aws->update_option_menu(); |
|---|
| 927 | |
|---|
| 928 | aws->at("dupconf"); |
|---|
| 929 | aws->callback(create_dup_config_window_cb); |
|---|
| 930 | aws->create_autosize_button("config_dup", "Configure"); |
|---|
| 931 | |
|---|
| 932 | WindowCallback search_wcb = makeWindowCallback(runGroupSearch_cb, &data); |
|---|
| 933 | |
|---|
| 934 | for (int crit = 1; crit<=MAX_CRITERIA; ++crit) { |
|---|
| 935 | if (crit>1) { |
|---|
| 936 | aws->at(GBS_global_string("op%i", crit)); |
|---|
| 937 | aws->create_option_menu(criterion_awar_name(AWARFORMAT_CRIT_OPERATOR, crit)); |
|---|
| 938 | aws->insert_option ("and", "a", CO_AND); |
|---|
| 939 | aws->insert_option ("or", "o", CO_OR); |
|---|
| 940 | aws->insert_default_option("ign", "i", CO_IGNORE); |
|---|
| 941 | aws->update_option_menu(); |
|---|
| 942 | } |
|---|
| 943 | |
|---|
| 944 | aws->at(GBS_global_string("crit%i", crit)); |
|---|
| 945 | aws->create_option_menu(criterion_awar_name(AWARFORMAT_CRIT_KEY, crit)); |
|---|
| 946 | aws->insert_default_option("groupname", "g", CT_NAME); |
|---|
| 947 | aws->insert_option ("parent", "p", CT_PARENT_DIRECT); |
|---|
| 948 | aws->insert_option ("parent (any)", "a", CT_PARENT_ANY); |
|---|
| 949 | aws->insert_option ("parent (all)", "l", CT_PARENT_ALL); |
|---|
| 950 | aws->insert_option ("nesting", "n", CT_NESTING_LEVEL); |
|---|
| 951 | aws->insert_option ("folded", "f", CT_FOLDED); |
|---|
| 952 | aws->insert_option ("size", "s", CT_SIZE); |
|---|
| 953 | aws->insert_option ("marked", "m", CT_MARKED); |
|---|
| 954 | aws->insert_option ("marked%", "%", CT_MARKED_PC); |
|---|
| 955 | aws->insert_option ("zombies", "z", CT_ZOMBIES); |
|---|
| 956 | aws->insert_option ("AID", "A", CT_AID); |
|---|
| 957 | aws->insert_option ("keeled", "k", CT_KEELED); |
|---|
| 958 | aws->update_option_menu(); |
|---|
| 959 | |
|---|
| 960 | aws->at(GBS_global_string("eq%i", crit)); |
|---|
| 961 | aws->create_toggle(criterion_awar_name(AWARFORMAT_CRIT_EQUALS, crit), "#equal.xpm", "#notEqual.xpm"); |
|---|
| 962 | |
|---|
| 963 | aws->at(GBS_global_string("content%i", crit)); |
|---|
| 964 | aws->d_callback(search_wcb); // ENTER in search field |
|---|
| 965 | aws->create_input_field(criterion_awar_name(AWARFORMAT_CRIT_MATCHES, crit)); |
|---|
| 966 | } |
|---|
| 967 | |
|---|
| 968 | aws->button_length(18); |
|---|
| 969 | |
|---|
| 970 | aws->at("doquery"); |
|---|
| 971 | aws->callback(search_wcb); |
|---|
| 972 | aws->create_button("SEARCH", "Search", "S", "+"); |
|---|
| 973 | |
|---|
| 974 | aws->button_length(13); |
|---|
| 975 | |
|---|
| 976 | aws->at("count"); |
|---|
| 977 | aws->label("Hits:"); |
|---|
| 978 | aws->create_button(NULp, AWAR_GROUP_HIT_COUNT, NULp, "+"); |
|---|
| 979 | |
|---|
| 980 | aws->at("result"); |
|---|
| 981 | aws->d_callback(makeWindowCallback(double_click_group_cb, &data)); |
|---|
| 982 | AW_selection_list *result_list = aws->create_selection_list(AWAR_MAYBE_INVALID_GROUP); |
|---|
| 983 | data.announce_result_list(result_list); |
|---|
| 984 | data.clear_result_list(); |
|---|
| 985 | |
|---|
| 986 | aws->at("order"); |
|---|
| 987 | aws->create_option_menu(AWAR_RESULT_ORDER); |
|---|
| 988 | aws->insert_default_option("unsorted", "u", GSC_NONE); |
|---|
| 989 | aws->insert_option ("by name", "n", GSC_NAME); |
|---|
| 990 | aws->insert_option ("by nesting", "g", GSC_NESTING); |
|---|
| 991 | aws->insert_option ("by size", "s", GSC_SIZE); |
|---|
| 992 | aws->insert_option ("by marked", "m", GSC_MARKED); |
|---|
| 993 | aws->insert_option ("by marked%", "%", GSC_MARKED_PC); |
|---|
| 994 | aws->insert_option ("by treename", "t", GSC_TREENAME); |
|---|
| 995 | aws->insert_option ("by treeorder", "o", GSC_TREEORDER); |
|---|
| 996 | aws->insert_option ("by hit", "h", GSC_HIT_REASON); |
|---|
| 997 | aws->insert_option ("by cluster", "c", GSC_CLUSTER); |
|---|
| 998 | aws->insert_option ("by AID", "A", GSC_AID); |
|---|
| 999 | aws->insert_option ("by keeled", "k", GSC_KEELED); |
|---|
| 1000 | aws->insert_option ("reverse", "r", GSC_REVERSE); |
|---|
| 1001 | aws->update_option_menu(); |
|---|
| 1002 | |
|---|
| 1003 | // actions (results): |
|---|
| 1004 | aws->button_length(6); |
|---|
| 1005 | |
|---|
| 1006 | aws->at("remhit"); |
|---|
| 1007 | aws->callback(makeWindowCallback(remove_hit_cb, &data)); |
|---|
| 1008 | aws->create_button("rm_sel", "Remove"); |
|---|
| 1009 | |
|---|
| 1010 | aws->at("clear"); |
|---|
| 1011 | aws->callback(makeWindowCallback(clear_results_cb, &data)); |
|---|
| 1012 | aws->create_button("clear", "Clear"); |
|---|
| 1013 | |
|---|
| 1014 | // actions (groups): |
|---|
| 1015 | // ..... rename |
|---|
| 1016 | aws->at("rename"); |
|---|
| 1017 | aws->callback(makeCreateWindowCallback(create_group_rename_window_cb, &data)); |
|---|
| 1018 | aws->create_button("rename", "Rename ..."); |
|---|
| 1019 | |
|---|
| 1020 | // ..... expand/collapse |
|---|
| 1021 | aws->at("expand"); |
|---|
| 1022 | aws->callback(makeWindowCallback(listed_groups_folding_cb, &data, GFM_EXPANDREC)); |
|---|
| 1023 | aws->create_button("expand_listed", "Expand listed"); |
|---|
| 1024 | |
|---|
| 1025 | aws->at("expcol"); |
|---|
| 1026 | aws->callback(makeWindowCallback(listed_groups_folding_cb, &data, GFM_EXPANDREC_COLLREST)); |
|---|
| 1027 | aws->create_button("explst_collrest", "Expand listed\ncollapse rest"); |
|---|
| 1028 | |
|---|
| 1029 | aws->at("expparent"); |
|---|
| 1030 | aws->callback(makeWindowCallback(listed_groups_folding_cb, &data, GFM_EXPANDPARENTS)); |
|---|
| 1031 | aws->create_button("expand_parents", "Expand parents"); |
|---|
| 1032 | |
|---|
| 1033 | aws->at("collapse"); |
|---|
| 1034 | aws->callback(makeWindowCallback(listed_groups_folding_cb, &data, GFM_COLLAPSE)); |
|---|
| 1035 | aws->create_button("collapse_listed", "Collapse listed"); |
|---|
| 1036 | |
|---|
| 1037 | // ..... delete |
|---|
| 1038 | aws->at("delete"); |
|---|
| 1039 | aws->callback(makeWindowCallback(delete_selected_group_cb, &data)); |
|---|
| 1040 | aws->create_button("del_sel", "Destroy\nselected group"); |
|---|
| 1041 | |
|---|
| 1042 | aws->at("dellisted"); |
|---|
| 1043 | aws->callback(makeWindowCallback(delete_listed_groups_cb, &data)); |
|---|
| 1044 | aws->create_button("del_listed", "Destroy all\nlisted groups"); |
|---|
| 1045 | |
|---|
| 1046 | // ..... mark/unmark |
|---|
| 1047 | aws->at("mark"); |
|---|
| 1048 | aws->callback(makeWindowCallback(group_mark_cb, &data, GMM_MARK)); |
|---|
| 1049 | aws->create_button("mark", "Mark"); |
|---|
| 1050 | aws->at("unmark"); |
|---|
| 1051 | aws->callback(makeWindowCallback(group_mark_cb, &data, GMM_UNMARK)); |
|---|
| 1052 | aws->create_button("unmark", "Unmark"); |
|---|
| 1053 | aws->at("inv"); |
|---|
| 1054 | aws->callback(makeWindowCallback(group_mark_cb, &data, GMM_INVERT)); |
|---|
| 1055 | aws->create_button("invert", "Inv"); |
|---|
| 1056 | |
|---|
| 1057 | aws->at("mwhich"); // needs to be created AFTER delete buttons |
|---|
| 1058 | aws->create_option_menu(AWAR_MARK_TARGET); |
|---|
| 1059 | aws->insert_default_option("selected", "s", GMT_SELECTED_GROUP); |
|---|
| 1060 | aws->insert_option ("any listed", "l", GMT_ANY_GROUP); |
|---|
| 1061 | aws->insert_option ("all listed", "a", GMT_ALL_GROUPS); |
|---|
| 1062 | aws->insert_option ("database", "d", GMT_ALL_SPECIES); |
|---|
| 1063 | aws->update_option_menu(); |
|---|
| 1064 | |
|---|
| 1065 | // trigger cleanup on popdown: |
|---|
| 1066 | aws->on_hide(makeWindowCallback(popdown_search_window_cb, &data)); |
|---|
| 1067 | awgs = aws; |
|---|
| 1068 | } |
|---|
| 1069 | |
|---|
| 1070 | awgs->activate(); |
|---|
| 1071 | } |
|---|
| 1072 | |
|---|