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| 1 | // ============================================================= // |
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| 2 | // // |
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| 3 | // File : PT_global_defs.h // |
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| 4 | // Purpose : global defines for pt-server and its clients // |
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| 5 | // // |
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| 6 | // Coded by Ralf Westram (coder@reallysoft.de) in March 2012 // |
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| 7 | // Institute of Microbiology (Technical University Munich) // |
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| 8 | // http://www.arb-home.de/ // |
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| 9 | // // |
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| 10 | // ============================================================= // |
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| 11 | |
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| 12 | #ifndef PT_GLOBAL_DEFS_H |
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| 13 | #define PT_GLOBAL_DEFS_H |
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| 14 | |
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| 15 | enum FF_complement { |
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| 16 | FF_FORWARD = 1, |
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| 17 | FF_REVERSE = 2, |
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| 18 | FF_REVERSE_COMPLEMENT = 4, |
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| 19 | FF_COMPLEMENT = 8, |
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| 20 | |
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| 21 | // do NOT change the order here w/o fixing ../PROBE/PT_family.cxx@FF_complement_dep |
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| 22 | }; |
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| 23 | |
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| 24 | enum RelativeScoreScaling { |
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| 25 | RSS_BOTH_MIN = 0, // scale versus minimum basecount of source+target seq (hardcoded before [8520]) |
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| 26 | RSS_BOTH_MAX, // scale versus maximum basecount of source+target seq |
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| 27 | RSS_SOURCE, // scale versus source basecount |
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| 28 | RSS_TARGET, // scale versus target basecount |
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| 29 | }; |
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| 30 | |
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| 31 | #else |
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| 32 | #error PT_global_defs.h included twice |
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| 33 | #endif // PT_GLOBAL_DEFS_H |
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