| 1 | #ifndef PS_PG_TREE_FUNCTIONS_HXX |
|---|
| 2 | #define PS_PG_TREE_FUNCTIONS_HXX |
|---|
| 3 | |
|---|
| 4 | #ifndef PS_DEFS_HXX |
|---|
| 5 | #include "ps_defs.hxx" |
|---|
| 6 | #endif |
|---|
| 7 | #ifndef PS_ASSERT_HXX |
|---|
| 8 | #include "ps_assert.hxx" |
|---|
| 9 | #endif |
|---|
| 10 | #ifndef ARBDB_H |
|---|
| 11 | #include <arbdb.h> |
|---|
| 12 | #endif |
|---|
| 13 | |
|---|
| 14 | // API for Probe-Group-Database format |
|---|
| 15 | |
|---|
| 16 | // db-structure of group_tree: |
|---|
| 17 | // |
|---|
| 18 | // <root> |
|---|
| 19 | // | |
|---|
| 20 | // | |
|---|
| 21 | // "group_tree" |
|---|
| 22 | // | |
|---|
| 23 | // | |
|---|
| 24 | // "node" <more nodes...> |
|---|
| 25 | // | | | |
|---|
| 26 | // | | | |
|---|
| 27 | // | | "group" (contains all probes for this group; may be missing) |
|---|
| 28 | // | | |
|---|
| 29 | // | "num" (contains species-number (created by PG_SpeciesName2SpeciesID)) |
|---|
| 30 | // | |
|---|
| 31 | // "node" <more nodes...> |
|---|
| 32 | // |
|---|
| 33 | // Notes: - the "node"s contained in the path from "group_tree" to any "group" |
|---|
| 34 | // describes the members of the group |
|---|
| 35 | |
|---|
| 36 | |
|---|
| 37 | |
|---|
| 38 | inline GBDATA *PG_get_first_probe(GBDATA *pb_group) { |
|---|
| 39 | return GB_entry(pb_group, "probe"); |
|---|
| 40 | } |
|---|
| 41 | |
|---|
| 42 | inline GBDATA *PG_get_next_probe(GBDATA *pb_probe) { |
|---|
| 43 | ps_assert(GB_has_key(pb_probe, "probe")); |
|---|
| 44 | return GB_nextEntry(pb_probe); |
|---|
| 45 | } |
|---|
| 46 | |
|---|
| 47 | inline const char *PG_read_probe(GBDATA *pb_probe) { |
|---|
| 48 | return GB_read_char_pntr(pb_probe); |
|---|
| 49 | } |
|---|
| 50 | |
|---|
| 51 | inline GBDATA *PS_get_first_node(GBDATA *pb_nodecontainer) { |
|---|
| 52 | return GB_entry(pb_nodecontainer, "node"); |
|---|
| 53 | } |
|---|
| 54 | |
|---|
| 55 | inline GBDATA *PS_get_next_node(GBDATA *pb_node) { |
|---|
| 56 | ps_assert(GB_has_key(pb_node, "node")); |
|---|
| 57 | return GB_nextEntry(pb_node); |
|---|
| 58 | } |
|---|
| 59 | |
|---|
| 60 | #else |
|---|
| 61 | #error ps_pg_tree_functions.hxx included twice |
|---|
| 62 | #endif // PS_PG_TREE_FUNCTIONS_HXX |
|---|