| 1 | // ========================================================= // |
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| 2 | // // |
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| 3 | // File : nds.h // |
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| 4 | // Purpose : Node Display Setup // |
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| 5 | // // |
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| 6 | // Institute of Microbiology (Technical University Munich) // |
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| 7 | // http://www.arb-home.de/ // |
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| 8 | // // |
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| 9 | // ========================================================= // |
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| 10 | |
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| 11 | #ifndef NDS_H |
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| 12 | #define NDS_H |
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| 13 | |
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| 14 | #ifndef ARBDB_BASE_H |
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| 15 | #include <arbdb_base.h> |
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| 16 | #endif |
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| 17 | #ifndef AW_BASE_HXX |
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| 18 | #include <aw_base.hxx> |
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| 19 | #endif |
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| 20 | #ifndef ARB_ASSERT_H |
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| 21 | #include <arb_assert.h> |
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| 22 | #endif |
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| 23 | #ifndef ARBTOOLS_H |
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| 24 | #include <arbtools.h> |
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| 25 | #endif |
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| 26 | #ifndef TREELABELER_H |
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| 27 | #include <TreeLabeler.h> |
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| 28 | #endif |
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| 29 | |
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| 30 | #define AWAR_SELECT_ACISRT "tmp/acisrt/select" |
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| 31 | #define AWAR_SELECT_ACISRT_PRE "tmp/acisrt/select_pre" |
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| 32 | |
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| 33 | // -------------------------------------------------------------------------------- |
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| 34 | |
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| 35 | enum NDS_Type { |
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| 36 | NDS_OUTPUT_LEAFTEXT = 0, // compress info (no tabbing, separate single fields by comma, completely skip empty fields); used in: ARB_NTREE-tree-display |
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| 37 | NDS_OUTPUT_LEAFTEXT_UNLIMITED = 1, // like NDS_OUTPUT_LEAFTEXT, but unlimited used in: ARB_NTREE-tree-export + ARB_DIST-matrix-export |
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| 38 | NDS_OUTPUT_TAB_SEPARATED = 2, // format info (using 1 tab per column - for easy import into star-calc, excel, etc. ); used in: ARB_NTREE-nds-export + -nds-list-display |
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| 39 | NDS_OUTPUT_COMMA_SEPARATED = 3, // like NDS_OUTPUT_TAB_SEPARATED, but using commas; used in: ARB_NTREE-nds-export |
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| 40 | }; |
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| 41 | |
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| 42 | class NDS_Labeler FINAL_TYPE : public TreeLabeler, virtual Noncopyable { |
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| 43 | NDS_Type type; |
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| 44 | |
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| 45 | mutable class NodeTextBuilder *builder; // pimpl |
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| 46 | NodeTextBuilder& theBuilder(GBDATA *gb_main) const; |
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| 47 | |
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| 48 | public: |
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| 49 | |
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| 50 | explicit NDS_Labeler(NDS_Type type_); |
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| 51 | virtual ~NDS_Labeler(); |
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| 52 | |
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| 53 | const char *speciesLabel(GBDATA *gb_main, GBDATA *gb_species, TreeNode *species, const char *tree_name) const OVERRIDE; |
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| 54 | const char *groupLabel(GBDATA *gb_main, GBDATA *gb_group, TreeNode *species, const char *tree_name) const OVERRIDE; |
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| 55 | |
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| 56 | NDS_Type get_NDS_Type() const { return type; } |
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| 57 | |
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| 58 | long max_columns(GBDATA *gb_main) const; |
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| 59 | }; |
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| 60 | |
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| 61 | // -------------------------------------------------------------------------------- |
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| 62 | |
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| 63 | AW_window *NDS_create_window(AW_root *aw_root, GBDATA *gb_main); |
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| 64 | void NDS_create_vars(AW_root *aw_root, AW_default awdef, GBDATA *gb_main); |
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| 65 | void NDS_popup_select_srtaci_window(AW_window *aww, const char *acisrt_awarname); |
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| 66 | char *NDS_mask_nonprintable_chars(char *inStr); |
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| 67 | |
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| 68 | #else |
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| 69 | #error nds.h included twice |
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| 70 | #endif // NDS_H |
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