1 | GBRNA.SEQ Genetic Sequence Data Bank |
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2 | 15 August 1993 |
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3 | |
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4 | NCBI-GenBank Flat File Release 78 |
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5 | |
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6 | Structural RNA Sequences |
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7 | |
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8 | 3348 loci, 1987296 bases, from 3348 reported sequences |
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9 | |
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10 | LOCUS AAURRA 118 bp ss-rRNA RNA 16-JUN-1986 |
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11 | DEFINITION A.auricula-judae (mushroom) 5S ribosomal RNA. |
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12 | ACCESSION K03160 |
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13 | KEYWORDS 5S ribosomal RNA; ribosomal RNA. |
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14 | SOURCE A.auricula-judae (mushroom) ribosomal RNA. |
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15 | ORGANISM Auricularia auricula-judae |
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16 | Eukaryota; Fungi; Eumycota; Basidiomycotina; Phragmobasidiomycetes; |
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17 | Heterobasidiomycetidae; Auriculariales; Auriculariaceae. |
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18 | REFERENCE 1 (bases 1 to 118) |
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19 | AUTHORS Huysmans,E., Dams,E., Vandenberghe,A. and De Wachter,R. |
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20 | TITLE The nucleotide sequences of the 5S rRNAs of four mushrooms and |
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21 | their use in studying the phylogenetic position of basidiomycetes |
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22 | among the eukaryotes |
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23 | JOURNAL Nucleic Acids Res. 11, 2871-2880 (1983) |
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24 | STANDARD full automatic |
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25 | FEATURES Location/Qualifiers |
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26 | rRNA 1..118 |
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27 | /note="5S ribosomal RNA" |
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28 | source 1..118 |
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29 | /organism="Auricularia auricula-judae" |
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30 | BASE COUNT 27 a 34 c 34 g 23 t |
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31 | ORIGIN 5' end of mature rRNA. |
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32 | 1 atccacggcc ataggactct gaaagcactg catcccgtcc gatctgcaaa gttaaccaga |
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33 | 61 gtaccgccca gttagtacca cggtggggga ccacgcggga atcctgggtg ctgtggtt |
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34 | // |
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35 | LOCUS ABCRR5SA 120 bp ss-rRNA RNA 08-DEC-1992 |
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36 | DEFINITION Acetobacter pasteurianus 5S ribosomal RNA. |
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37 | ACCESSION M76569 |
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38 | KEYWORDS 5S ribosomal RNA. |
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39 | SOURCE Acetobacter pasteurianus (library: NCIB 12228) rRNA. |
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40 | ORGANISM Acetobacter pasteurianus |
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41 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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42 | Azotobacteraceae. |
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43 | REFERENCE 1 (bases 1 to 120) |
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44 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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45 | Tourova,T.P. and Chumakov,K.M. |
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46 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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47 | Gluconobacter by 5S ribosomal RNA sequencing |
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48 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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49 | STANDARD full automatic |
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50 | FEATURES Location/Qualifiers |
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51 | rRNA 1..120 |
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52 | /product="5S ribosomal RNA" |
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53 | /gene="5S rRNA" |
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54 | source 1..120 |
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55 | /organism="Acetobacter pasteurianus" |
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56 | BASE COUNT 25 a 40 c 34 g 19 t 2 others |
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57 | ORIGIN |
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58 | 1 rracctggtg gccatggcgg gagagatcca cccgatccca tcccgaactc ggccgtgaaa |
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59 | 61 acccccagcg cctatgatac gttggcttaa gccacgggaa agtcggtcgc cgccaggtct |
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60 | // |
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61 | LOCUS ABCRR5SC 120 bp ss-rRNA RNA 08-DEC-1992 |
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62 | DEFINITION Acetobacter methanolicus 5S ribosomal RNA. |
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63 | ACCESSION M76571 |
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64 | KEYWORDS 5S ribosomal RNA. |
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65 | SOURCE Acetobacter methanolicus (strain MB58) rRNA. |
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66 | ORGANISM Acetobacter methanolicus |
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67 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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68 | Azotobacteraceae. |
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69 | REFERENCE 1 (bases 1 to 120) |
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70 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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71 | Tourova,T.P. and Chumakov,K.M. |
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72 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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73 | Gluconobacter by 5S ribosomal RNA sequencing |
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74 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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75 | STANDARD full automatic |
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76 | FEATURES Location/Qualifiers |
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77 | rRNA 1..120 |
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78 | /product="5S ribosomal RNA" |
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79 | /gene="5S rRNA" |
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80 | source 1..120 |
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81 | /organism="Acetobacter methanolicus" |
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82 | BASE COUNT 27 a 41 c 32 g 18 t 2 others |
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83 | ORIGIN |
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84 | 1 ngatctggtg gccatggcgg gagcaaatca gccgatccca tcccgaactc ggccgtcaaa |
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85 | 61 tgccccagcg cccatgatac tctgcctcaa ggcacggaaa agtcggtcgc cgccagatcy |
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86 | // |
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87 | LOCUS ABCRR5SD 120 bp ss-rRNA RNA 08-DEC-1992 |
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88 | DEFINITION Acetobacter xylinum 5S ribosomal RNA. |
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89 | ACCESSION M76572 |
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90 | KEYWORDS 5S ribosomal RNA. |
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91 | SOURCE Acetobacter xylinum (strain VKM 820) rRNA. |
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92 | ORGANISM Acetobacter xylinum |
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93 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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94 | Azotobacteraceae. |
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95 | REFERENCE 1 (bases 1 to 120) |
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96 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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97 | Tourova,T.P. and Chumakov,K.M. |
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98 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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99 | Gluconobacter by 5S ribosomal RNA sequencing |
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100 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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101 | STANDARD full automatic |
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102 | FEATURES Location/Qualifiers |
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103 | rRNA 1..120 |
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104 | /product="5S ribosomal RNA" |
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105 | /gene="5S rRNA" |
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106 | source 1..120 |
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107 | /organism="Acetobacter xylinum" |
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108 | BASE COUNT 26 a 39 c 35 g 20 t |
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109 | ORIGIN |
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110 | 1 agacctggtg gcaatggcgg ggaatatcca cccgatccca tcccgaactc ggccgtgaaa |
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111 | 61 tgccccagcg cccatgatac tgtgccttaa ggcacgggaa agtcggtcgc cgccaggtct |
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112 | // |
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113 | LOCUS ABCRR5SE 120 bp ss-rRNA RNA 08-DEC-1992 |
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114 | DEFINITION Acetobacter aceti (NCIB 8621) 5S ribosomal RNA. |
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115 | ACCESSION M76573 |
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116 | KEYWORDS 5S ribosomal RNA. |
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117 | SOURCE Acetobacter aceti (library: NCIB 8621) rRNA. |
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118 | ORGANISM Acetobacter aceti |
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119 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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120 | Azotobacteraceae. |
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121 | REFERENCE 1 (bases 1 to 120) |
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122 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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123 | Tourova,T.P. and Chumakov,K.M. |
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124 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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125 | Gluconobacter by 5S ribosomal RNA sequencing |
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126 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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127 | STANDARD full automatic |
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128 | FEATURES Location/Qualifiers |
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129 | rRNA 1..120 |
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130 | /product="5S ribosomal RNA" |
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131 | /gene="5S rRNA" |
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132 | source 1..120 |
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133 | /organism="Acetobacter aceti" |
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134 | BASE COUNT 24 a 39 c 36 g 20 t 1 others |
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135 | ORIGIN |
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136 | 1 rgacctggtg gctatggcgg gagagatcca cccgatccca tcccgaactc ggccgtgaaa |
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137 | 61 acccccagcg cctatgatac tgcggcttaa gccgtgggaa agtcggtcgc cgccaggtct |
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138 | // |
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139 | LOCUS ABCRR5SF 120 bp ss-rRNA RNA 08-DEC-1992 |
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140 | DEFINITION Acetobacter sp. (strain 867) 5S ribosomal RNA. |
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141 | ACCESSION M76574 |
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142 | KEYWORDS 5S ribosomal RNA. |
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143 | SOURCE Acetobacter sp. (strain 867) rRNA. |
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144 | ORGANISM Acetobacter sp. |
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145 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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146 | Azotobacteraceae. |
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147 | REFERENCE 1 (bases 1 to 120) |
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148 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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149 | Tourova,T.P. and Chumakov,K.M. |
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150 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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151 | Gluconobacter by 5S ribosomal RNA sequencing |
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152 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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153 | STANDARD full automatic |
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154 | FEATURES Location/Qualifiers |
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155 | rRNA 1..120 |
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156 | /product="5S ribosomal RNA" |
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157 | /gene="5S rRNA" |
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158 | source 1..120 |
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159 | /organism="Acetobacter sp." |
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160 | BASE COUNT 27 a 42 c 31 g 18 t 2 others |
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161 | ORIGIN |
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162 | 1 ngatctggtg gccatggcgg cagcaaatca cccgatccca tgccgaactc ggccgtcaaa |
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163 | 61 tgccccagcg cccatgatac tctgcctcaa ggcacggaaa agtcggtcgc cgccagatcy |
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164 | // |
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165 | LOCUS ABCRR5SG 120 bp ss-rRNA RNA 08-DEC-1992 |
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166 | DEFINITION Acetobacter sp. (strain 913) 5S ribosomal RNA. |
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167 | ACCESSION M76575 |
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168 | KEYWORDS 5S ribosomal RNA. |
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169 | SOURCE Acetobacter sp. (strain 913) rRNA. |
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170 | ORGANISM Acetobacter sp. |
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171 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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172 | Azotobacteraceae. |
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173 | REFERENCE 1 (bases 1 to 120) |
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174 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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175 | Tourova,T.P. and Chumakov,K.M. |
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176 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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177 | Gluconobacter by 5S ribosomal RNA sequencing |
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178 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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179 | STANDARD full automatic |
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180 | FEATURES Location/Qualifiers |
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181 | rRNA 1..120 |
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182 | /product="5S ribosomal RNA" |
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183 | /gene="5S rRNA" |
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184 | source 1..120 |
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185 | /organism="Acetobacter sp." |
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186 | BASE COUNT 28 a 41 c 30 g 20 t 1 others |
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187 | ORIGIN |
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188 | 1 ngatctggtg gtcatagcgg gagtaaatca cccgatccca tcccgaactc ggccgtcaaa |
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189 | 61 tgcctcagcg cccatgatac tctgcctcaa ggcacggaaa agtcggtcgc cgccagaccc |
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190 | // |
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191 | LOCUS ABCRR5SH 120 bp ss-rRNA RNA 08-DEC-1992 |
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192 | DEFINITION Acetobacter sp. (strain 924) 5S ribosomal RNA. |
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193 | ACCESSION M76576 |
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194 | KEYWORDS 5S ribosomal RNA. |
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195 | SOURCE Acetobacter sp. (strain 924) rRNA. |
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196 | ORGANISM Acetobacter sp. |
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197 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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198 | Azotobacteraceae. |
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199 | REFERENCE 1 (bases 1 to 120) |
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200 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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201 | Tourova,T.P. and Chumakov,K.M. |
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202 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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203 | Gluconobacter by 5S ribosomal RNA sequencing |
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204 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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205 | STANDARD full automatic |
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206 | FEATURES Location/Qualifiers |
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207 | rRNA 1..120 |
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208 | /product="5S ribosomal RNA" |
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209 | /gene="5S rRNA" |
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210 | source 1..120 |
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211 | /organism="Acetobacter sp." |
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212 | BASE COUNT 29 a 42 c 29 g 18 t 2 others |
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213 | ORIGIN |
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214 | 1 ngatctgatg accatggcgg gagcaaatca cccgatccca tcccgaactc ggccgtcaaa |
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215 | 61 tgccccagcg cccatgatac tctgcctcaa ggcacggaaa agtcggtcgc cgccagatcy |
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216 | // |
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217 | LOCUS ABCRR5SI 120 bp ss-rRNA RNA 08-DEC-1992 |
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218 | DEFINITION Acetobacter aceti (strain VKM 879) 5S ribosomal RNA. |
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219 | ACCESSION M76578 |
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220 | KEYWORDS 5S ribosomal RNA. |
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221 | SOURCE Acetobacter aceti (strain VKM 879) rRNA. |
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222 | ORGANISM Acetobacter aceti |
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223 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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224 | Azotobacteraceae. |
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225 | REFERENCE 1 (bases 1 to 120) |
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226 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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227 | Tourova,T.P. and Chumakov,K.M. |
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228 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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229 | Gluconobacter by 5S ribosomal RNA sequencing |
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230 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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231 | STANDARD full automatic |
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232 | FEATURES Location/Qualifiers |
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233 | rRNA 1..120 |
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234 | /product="5S ribosomal RNA" |
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235 | /gene="5S rRNA" |
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236 | source 1..120 |
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237 | /organism="Acetobacter aceti" |
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238 | BASE COUNT 24 a 40 c 37 g 19 t |
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239 | ORIGIN |
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240 | 1 ggacctggtg gctatggcgg gagagatcca cccgatccca tcccgaactc ggccgtgaaa |
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241 | 61 acccccagcg cctatgatac tgcggcttaa gccgtgggaa agtcggtcgc cgccaggtcc |
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242 | // |
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243 | LOCUS ABCRR5SJ 120 bp ss-rRNA RNA 08-DEC-1992 |
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244 | DEFINITION Acetobacter sp. (strain 914) 5S ribosomal RNA. |
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245 | ACCESSION M76580 |
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246 | KEYWORDS 5S ribosomal RNA. |
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247 | SOURCE Acetobacter sp. (strain 914) rRNA. |
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248 | ORGANISM Acetobacter sp. |
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249 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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250 | Azotobacteraceae. |
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251 | REFERENCE 1 (bases 1 to 120) |
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252 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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253 | Tourova,T.P. and Chumakov,K.M. |
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254 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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255 | Gluconobacter by 5S ribosomal RNA sequencing |
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256 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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257 | STANDARD full automatic |
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258 | FEATURES Location/Qualifiers |
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259 | rRNA 1..120 |
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260 | /product="5S ribosomal RNA" |
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261 | /gene="5S rRNA" |
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262 | source 1..120 |
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263 | /organism="Acetobacter sp." |
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264 | BASE COUNT 28 a 42 c 30 g 18 t 2 others |
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265 | ORIGIN |
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266 | 1 ngatctgatg gccatggcgg gagcaaatca cccgatccca tcccgaactc ggccgtcaaa |
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267 | 61 tgccccagcg cccatgatac tctgcctcaa ggcacggaaa agtcggtcgc cgccagatcy |
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268 | // |
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269 | LOCUS ABCRRAA 118 bp ss-rRNA RNA 15-SEP-1990 |
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270 | DEFINITION Acetobacter sp. (strain MB 58) 5S ribosomal RNA, complete sequence. |
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271 | ACCESSION M34766 |
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272 | KEYWORDS 5S ribosomal RNA. |
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273 | SOURCE Acetobacter sp. (strain MB 58) rRNA. |
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274 | ORGANISM Acetobacter sp. |
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275 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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276 | Azotobacteraceae. |
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277 | REFERENCE 1 (bases 1 to 118) |
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278 | AUTHORS Bulygina,E.S., Galchenko,V.F., Govorukhina,N.I., Netrusov,A.I., |
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279 | Nikitin,D.I., Trotsenko,Y.A. and Chumakov,K.M. |
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280 | TITLE Taxonomic studies of methylotrophic bacteria by 5S ribosomal RNA |
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281 | sequencing |
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282 | JOURNAL J. Gen. Microbiol. 136, 441-446 (1990) |
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283 | STANDARD full automatic |
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284 | FEATURES Location/Qualifiers |
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285 | rRNA 1..118 |
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286 | /note="5S ribosomal RNA" |
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287 | source 1..118 |
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288 | /organism="Acetobacter sp." |
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289 | BASE COUNT 27 a 40 c 32 g 17 t 2 others |
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290 | ORIGIN |
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291 | 1 gatctggtgg ccatggcggg agcaaatcag ccgatcccat cccgaactcg gccgtcaaat |
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292 | 61 gccccagcgc ccatgatact ctgcctcaag gcacggaaaa gtcggtcgcc gccagayy |
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293 | // |
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294 | LOCUS ABCRRAB 118 bp ss-rRNA RNA 15-SEP-1990 |
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295 | DEFINITION Acetobacter sp. (strain 914) 5S ribosomal RNA, complete sequence. |
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296 | ACCESSION M34767 |
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297 | KEYWORDS 5S ribosomal RNA. |
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298 | SOURCE Acetobacter sp. (strain 914) rRNA. |
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299 | ORGANISM Acetobacter sp. |
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300 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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301 | Azotobacteraceae. |
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302 | REFERENCE 1 (bases 1 to 118) |
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303 | AUTHORS Bulygina,E.S., Galchenko,V.F., Govorukhina,N.I., Netrusov,A.I., |
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304 | Nikitin,D.I., Trotsenko,Y.A. and Chumakov,K.M. |
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305 | TITLE Taxonomic studies of methylotrophic bacteria by 5S ribosomal RNA |
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306 | sequencing |
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307 | JOURNAL J. Gen. Microbiol. 136, 441-446 (1990) |
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308 | STANDARD full automatic |
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309 | FEATURES Location/Qualifiers |
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310 | rRNA 1..118 |
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311 | /note="5S ribosomal RNA" |
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312 | source 1..118 |
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313 | /organism="Acetobacter sp." |
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314 | BASE COUNT 27 a 42 c 29 g 18 t 2 others |
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315 | ORIGIN |
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316 | 1 nntctgatgg ccatggcggg agcaaatcac ccgatcccat cccgaactcg gccgtcaaat |
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317 | 61 gccccagcgc ccatgatact ctgcctcaag gcacggaaaa gtcggtcgcc gccagatc |
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318 | // |
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319 | LOCUS ABCRRS5B 120 bp ss-rRNA RNA 08-DEC-1992 |
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320 | DEFINITION Acetobacter sp. (strain MB 58/4) 5S ribosomal RNA. |
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321 | ACCESSION M76570 |
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322 | KEYWORDS 5S ribosomal RNA. |
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323 | SOURCE Acetobacter sp. (strain MB 58/4) rRNA. |
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324 | ORGANISM Acetobacter sp. |
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325 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
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326 | Azotobacteraceae. |
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327 | REFERENCE 1 (bases 1 to 120) |
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328 | AUTHORS Bulygina,E.S., Gulikova,O.M., Dikanskaya,E.M., Netrusov,A.I., |
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329 | Tourova,T.P. and Chumakov,K.M. |
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330 | TITLE Taxonomic studies of the genera Acidomonas, Acetobacter and |
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331 | Gluconobacter by 5S ribosomal RNA sequencing |
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332 | JOURNAL J. Gen. Microbiol. 138, 2283-2286 (1992) |
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333 | STANDARD full automatic |
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334 | FEATURES Location/Qualifiers |
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335 | rRNA 1..120 |
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336 | /product="5S ribosomal RNA" |
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337 | /gene="5S rRNA" |
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338 | source 1..120 |
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339 | /organism="Acetobacter sp." |
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340 | BASE COUNT 25 a 44 c 32 g 18 t 1 others |
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341 | ORIGIN |
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342 | 1 ngatctggtg gccatggcgg ggcgcaatca cccgatccca tcccgaactc ggccgtcaaa |
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343 | 61 tgccccagcg cccatgatac tctgcctcaa ggcacggaaa agtcggtcgc cgccagatcc |
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344 | // |
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345 | LOCUS ABLREAA 1441 bp ss-rRNA RNA 17-OCT-1991 |
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346 | DEFINITION Amblyomma americanum 18S rRNA sequence. |
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347 | ACCESSION M60487 |
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348 | KEYWORDS ribosomal RNA. |
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349 | SOURCE Amblyomma americanum rRNA. |
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350 | ORGANISM Amblyomma americanum |
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351 | Eukaryota; Animalia; Metazoa; Arthropoda; Chelicerata; Arachnida; |
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352 | Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae. |
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353 | REFERENCE 1 (bases 1 to 1441) |
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354 | AUTHORS Turbeville,J.M., Pfeifer,D.M., Field,K.G. and Raff,R.A. |
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355 | TITLE The phylogenetic status of arthropods, as inferred 18S rRNA |
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356 | sequences |
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357 | JOURNAL Mol. Biol. Evol. 8, 669-686 (1991) |
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358 | STANDARD full automatic |
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359 | FEATURES Location/Qualifiers |
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360 | rRNA <1..>1441 |
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361 | source 1..1441 |
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362 | /organism="Amblyomma americanum" |
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363 | BASE COUNT 357 a 330 c 393 g 351 t 10 others |
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364 | ORIGIN |
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365 | 1 tggcggccgc tctagagcta atacatgcat tgagcctgaa ggcctttggc tgacgggcgc |
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366 | 61 ttttattaga ccaagaccca tcgggttctg cccgtactct gtggtgactc tggataactt |
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367 | 121 tgtgctgatc gcatggccat gagccggcga cgtttctttc aagtgtctgc cttatcaact |
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368 | 181 ttcgatggta ggttacttgc ctaccatggt tgttacgggt aacggagaat cagggttcga |
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369 | 241 ttccggagag ggagcctgag aaacggctac cacatccaag gaaggcagca ggcgcgcaaa |
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370 | 301 ttacccactc ccggcacggg gaggtagtga cgaaaaataa caatacggga ctcttttgag |
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371 | 361 gccccgtaat tgaaatgagt acactctaaa tcctttaacg aggatcaatt ggagggcaag |
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372 | 421 tctggtgcca gcanccgcgg taattccagc tccaatagcg tatattaann ctgctgcggt |
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373 | 481 taaaaagctc gtagttggat ctcagttcca gactgagtag tgcatctacc cgatgcgacg |
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374 | 541 gctcggactg aacatcatgc cggtcctctc ttggtgccct tcattggtgc gtctcgagga |
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375 | 601 ggcctgcgct tttactttga aaaaattaga gtgctcaacg cagcgagtcg cctgaataaa |
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376 | 661 cttgcatgga ataatagaac aagaccccgt ttctgttctg ttggtttttg gaatacgggg |
---|
377 | 721 taatgattaa gagggacaga cgggggcatt cgtattgcgg cgctagaggt gaaattcttg |
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378 | 781 gaccgtcgca agacgaacta ctgcgaaagc atttgccaag aatgttttct ttgatcaaga |
---|
379 | 841 acgaaagtca gaggttcgaa ggcgatcaga taccgcccta gttctgacca taaacgatgc |
---|
380 | 901 caaccagcga tccgcctgag ttactcaaat gactcggcgg gcagcttccg ggaaaccaaa |
---|
381 | 961 gtatttgggt tccgggggaa gtatggttgc aaagctgaaa cttaaaggaa ttgacngann |
---|
382 | 1021 ggcaccacca ggagtggagc ctgcgcttaa tttgactcaa cacgggaaaa cttacncgnn |
---|
383 | 1081 ncggacactg ggaggattga cagattgaga gctctttctt gattcggtgg atggtggtgc |
---|
384 | 1141 atggccgttc ttagttggtg gagcgatttg tctggttaat tccgataacg aacgagactc |
---|
385 | 1201 tagcctatta atagtgcggg ttcccagcac cttacaacct tcttagaggg acaacgctcc |
---|
386 | 1261 tagccgcacg aaacagagca ataacaggtc tgtgatgccc ttagatgtcc ggggccgcac |
---|
387 | 1321 gcgcgctaca ctgaaggaag cagcgtgtct ttatccctgt ctgaaaagac tgggtaaccc |
---|
388 | 1381 gtggaacttc cttcgtgatt gggatagggg cttgcaattg ttccccttga acgaggaatt |
---|
389 | 1441 c |
---|
390 | // |
---|
391 | LOCUS ABYMTRR12S 952 bp ss-rRNA RNA 10-DEC-1992 |
---|
392 | DEFINITION Amblysomus hottentotus mitochondrial 12S ribosomal RNA. |
---|
393 | ACCESSION M95108 |
---|
394 | KEYWORDS 12S ribosomal RNA. |
---|
395 | SOURCE Amblysomus hottentotus (organelle Mitochondrion Amblysomus |
---|
396 | hottentotus) liver rRNA. |
---|
397 | ORGANISM Amblysomus hottentotus |
---|
398 | Eukaryota; Animalia; Chordata; Vertebrata; Mammalia; Theria; |
---|
399 | Eutheria; Insectivora; Lipotyphla; Chrysochloridae. |
---|
400 | REFERENCE 1 (bases 1 to 952) |
---|
401 | AUTHORS Allard,M.W. and Miyamoto,M.M. |
---|
402 | TITLE Testing phylogenetic approaches with empirical data as illustrated |
---|
403 | with the parsimony method |
---|
404 | JOURNAL Mol. Biol. Evol. 9, 778-786 (1992) |
---|
405 | STANDARD full automatic |
---|
406 | FEATURES Location/Qualifiers |
---|
407 | rRNA 1..952 |
---|
408 | /product="12S ribosomal RNA" |
---|
409 | /gene="12S rRNA" |
---|
410 | source 1..952 |
---|
411 | /organism="Amblysomus hottentotus" |
---|
412 | BASE COUNT 347 a 187 c 161 g 257 t |
---|
413 | ORIGIN |
---|
414 | 1 taaaggtttg gtcctggcct ttttattagt tggtagtaaa attatacatg caagtttcag |
---|
415 | 61 caacccagtg agaataccct ttaaatctgc tagattaata ggagtaggta tcaagcacac |
---|
416 | 121 cattaggtag ctaataacac cttgcttagc cacaccccca cgggttacag cagtaacaaa |
---|
417 | 181 aatttagcaa ttaacgaaag ttagactaag ttatactact ctagggttgg taaatttcgt |
---|
418 | 241 gccagccacc gcggtcatac gattaaccca aactaataaa taccggcgta aagcgtgttc |
---|
419 | 301 aggggaaaca aaacaataaa gatgaaatat ttctacactg taaaaagtta tagaagtact |
---|
420 | 361 aaaaatatac tacgaaagtg actttattac accttacaac acgatagcta agacacaaac |
---|
421 | 421 tgggattaga taccccacta tgcttagccc taaactttaa taatttaaaa caaaattatt |
---|
422 | 481 cgccagagaa ctactagcaa tagcctaaaa cttaaaggac ttggcggtgc tttatatcca |
---|
423 | 541 cctagaggag cctgttatat aatcgataaa ccccgataaa cctcaccact tcttgctaat |
---|
424 | 601 ccagtctata taccgccatc ttcagcaaac ccttaaaagg caaaacagta agcttaataa |
---|
425 | 661 tttccataaa aacgttaggt caaggtgtag cctatgtagt ggtattcaat gggctacatt |
---|
426 | 721 ttctgatcca gaacattctt aacggatatt tttatgaaat taaaaattaa aggaggattt |
---|
427 | 781 agtagtaaac taagaataga gagcttagtt gaattaggcc atgaagcacg tacacaccgc |
---|
428 | 841 ccgtcaccct cctcaagtaa ctatattcta ttaaacatat tttatcctaa taaatacaag |
---|
429 | 901 aggagataag tcgtaacaag gtaagcatac tggaaagtgt gcttggaaaa ct |
---|
430 | // |
---|
431 | LOCUS ACARR58S 162 bp ss-rRNA RNA 15-MAR-1989 |
---|
432 | DEFINITION A.castellanii (amoeba) 5.8S ribosomal RNA. |
---|
433 | ACCESSION K00471 |
---|
434 | KEYWORDS 5.8S ribosomal RNA; ribosomal RNA. |
---|
435 | SOURCE A.castellani (amoeba; strain ATCC 30010) rRNA. |
---|
436 | ORGANISM Acanthamoeba castellanii |
---|
437 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
438 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
439 | Acanthamoebidae. |
---|
440 | REFERENCE 1 (bases 1 to 162) |
---|
441 | AUTHORS Mackay,R.M. and Doolittle,W.F. |
---|
442 | TITLE Nucleotide sequences of AcanthamoebA.castellanii 5S and 5.8S |
---|
443 | ribosomal ribonucleic acids: Phylogenetic and comparative |
---|
444 | structural analyses |
---|
445 | JOURNAL Nucleic Acids Res. 9, 3321-3334 (1981) |
---|
446 | STANDARD full automatic |
---|
447 | COMMENT [1] also sequenced A.castellanii 5S rRNA <K03160>. |
---|
448 | FEATURES Location/Qualifiers |
---|
449 | rRNA 1..162 |
---|
450 | /note="5.8S rRNA" |
---|
451 | source 1..162 |
---|
452 | /organism="Acanthamoeba castellanii" |
---|
453 | BASE COUNT 40 a 39 c 44 g 39 t |
---|
454 | ORIGIN 5' end of mature rRNA. |
---|
455 | 1 aactcctaac aacggatatc ttggttctcg cgaggatgaa gaacgcagcg aaatgcgata |
---|
456 | 61 cgtagtgtga atcgcaggga tcagtgaatc atcgaatctt tgaacgcaag ttgcgctctc |
---|
457 | 121 gtggtttaac cccccgggag cacgttcgct tgagtgccgc tt |
---|
458 | // |
---|
459 | LOCUS ACARRDX 119 bp ss-rRNA RNA 15-SEP-1990 |
---|
460 | DEFINITION A.castellani 5S ribosomal RNA. |
---|
461 | ACCESSION M28984 |
---|
462 | KEYWORDS 5S ribosomal RNA. |
---|
463 | SOURCE A.castellani ribosomal RNA from Viluy encephalomyelitis patient |
---|
464 | KPN.. |
---|
465 | ORGANISM Acanthamoeba castellanii |
---|
466 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
467 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
468 | Acanthamoebidae. |
---|
469 | REFERENCE 1 (bases 1 to 119) |
---|
470 | AUTHORS Chumakov,K.M. and Karavanov,A.S. |
---|
471 | TITLE Preliminary characterization of an organism isolated from a case of |
---|
472 | Viluy encephalomyelitis indicates a protozoal, rather than viral, |
---|
473 | aetiology |
---|
474 | JOURNAL J. Gen. Microbiol. 132, 1127-1133 (1986) |
---|
475 | STANDARD full automatic |
---|
476 | FEATURES Location/Qualifiers |
---|
477 | rRNA 1..119 |
---|
478 | /note="5S ribosomal RNA" |
---|
479 | source 1..119 |
---|
480 | /organism="Acanthamoeba castellanii" |
---|
481 | BASE COUNT 26 a 36 c 37 g 20 t |
---|
482 | ORIGIN |
---|
483 | 1 ggatacggcc atactgcgca gaaagcaccg cttcccatcc gaacagcgaa gttaagctgc |
---|
484 | 61 gcgaggcggt gttagtactg gggtgggcga ccacccggga atccaccgtg ccgtatcct |
---|
485 | // |
---|
486 | LOCUS ACARRJJE 241 bp ss-rRNA RNA 05-NOV-1990 |
---|
487 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
488 | ACCESSION M57865 M33241 |
---|
489 | KEYWORDS 18S ribosomal RNA. |
---|
490 | SOURCE A.castellanii (strain 013) ribosomal RNA. |
---|
491 | ORGANISM Acanthamoeba castellanii |
---|
492 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
493 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
494 | Acanthamoebidae. |
---|
495 | REFERENCE 1 (bases 1 to 241) |
---|
496 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
497 | Baverstock,P.R. |
---|
498 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
499 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
500 | STANDARD full automatic |
---|
501 | FEATURES Location/Qualifiers |
---|
502 | source 1..241 |
---|
503 | /organism="Acanthamoeba castellanii" |
---|
504 | BASE COUNT 60 a 39 c 57 g 48 t 37 others |
---|
505 | ORIGIN A region. |
---|
506 | 1 ccctatnaac tttngatggt ngatagaggc ctncatggtc gtaangcggt annggagaat |
---|
507 | 61 tagggttnga ttgcnggann anngagccgt gagaaatcgg ctnnccatct tntaaggnng |
---|
508 | 121 gcagcaggng cnnnnattac ccnatccgac nnggggagng nntgacaata aataacaata |
---|
509 | 181 caggcgctcg ataagagnct tgtaattgga atgagtacaa tttaancccc ttancnnntn |
---|
510 | 241 n |
---|
511 | // |
---|
512 | LOCUS ACARRJJEA 258 bp ss-rRNA RNA 05-NOV-1990 |
---|
513 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
514 | ACCESSION M57866 M33242 |
---|
515 | KEYWORDS 18S ribosomal RNA. |
---|
516 | SOURCE A.castellanii (strain 010) ribosomal RNA. |
---|
517 | ORGANISM Acanthamoeba castellanii |
---|
518 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
519 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
520 | Acanthamoebidae. |
---|
521 | REFERENCE 1 (bases 1 to 258) |
---|
522 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
523 | Baverstock,P.R. |
---|
524 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
525 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
526 | STANDARD full automatic |
---|
527 | FEATURES Location/Qualifiers |
---|
528 | source 1..258 |
---|
529 | /organism="Acanthamoeba castellanii" |
---|
530 | BASE COUNT 67 a 43 c 66 g 56 t 26 others |
---|
531 | ORIGIN A region. |
---|
532 | 1 aaaatttctn ccctatacaa ctttngatgg tagnatagag gcctacnatg gtcagtaang |
---|
533 | 61 cggtancgnn naattagggt tcgattnccc gagannnnng agctctgaga aatcggctnc |
---|
534 | 121 catcttgcta nangggnngg cagcaggcgc nnnaattngc ccagagtcgc agacnngggg |
---|
535 | 181 aggtgatgtg agctatataa agtgagatca atacaggcgg cctcgataag agtcttgtaa |
---|
536 | 241 ttggaatgag tacaattt |
---|
537 | // |
---|
538 | LOCUS ACARRJJEB 257 bp ss-rRNA RNA 05-NOV-1990 |
---|
539 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
540 | ACCESSION M57867 M33243 |
---|
541 | KEYWORDS 18S ribosomal RNA. |
---|
542 | SOURCE A.castellanii (strain 102) ribosomal RNA. |
---|
543 | ORGANISM Acanthamoeba castellanii |
---|
544 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
545 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
546 | Acanthamoebidae. |
---|
547 | REFERENCE 1 (bases 1 to 257) |
---|
548 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
549 | Baverstock,P.R. |
---|
550 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
551 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
552 | STANDARD full automatic |
---|
553 | FEATURES Location/Qualifiers |
---|
554 | source 1..257 |
---|
555 | /organism="Acanthamoeba castellanii" |
---|
556 | BASE COUNT 66 a 50 c 66 g 56 t 19 others |
---|
557 | ORIGIN A region. |
---|
558 | 1 acggcgacga ttcattacaa atttctgccc tatcancttt cgatggtagg atagaggtcc |
---|
559 | 61 taccatggtc gtaacgcggt aacggagaat tagggttcga ttnccggann anngagccgt |
---|
560 | 121 gagaaatcgg ctnccntctt gcntgaaggg nnggcagcag gcgcnnnaat tncccaatcc |
---|
561 | 181 gacnngggga ggtngtgnca ataaataatc aatacaggcc ctcgataaga gtcttgtaat |
---|
562 | 241 tggaatgagt gacaatt |
---|
563 | // |
---|
564 | LOCUS ACARRJJEC 261 bp ss-rRNA RNA 05-NOV-1990 |
---|
565 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
566 | ACCESSION M57868 M33244 |
---|
567 | KEYWORDS 18S ribosomal RNA. |
---|
568 | SOURCE A.castellanii (strain 014) ribosomal RNA. |
---|
569 | ORGANISM Acanthamoeba castellanii |
---|
570 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
571 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
572 | Acanthamoebidae. |
---|
573 | REFERENCE 1 (bases 1 to 261) |
---|
574 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
575 | Baverstock,P.R. |
---|
576 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
577 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
578 | STANDARD full automatic |
---|
579 | FEATURES Location/Qualifiers |
---|
580 | source 1..261 |
---|
581 | /organism="Acanthamoeba castellanii" |
---|
582 | BASE COUNT 71 a 46 c 69 g 55 t 20 others |
---|
583 | ORIGIN A region. |
---|
584 | 1 ggcgacgatt cattacaaat ttctgcccta tcaactttcg atggtaggat agaggcctac |
---|
585 | 61 catggtcgta angcggtaac ggngaatata gggttcgatt ncnnnagann nngagcctga |
---|
586 | 121 gaaatcggct nccatcttnc taagggnngg cagcaggcgc nnnaattacc caagtccaga |
---|
587 | 181 cnnggggagg tgagtgagca atanaagtga gatcaataca ggcgctcgat aagagtcttg |
---|
588 | 241 taattggaat gagtgacaat t |
---|
589 | // |
---|
590 | LOCUS ACARRJJED 223 bp ss-rRNA RNA 05-NOV-1990 |
---|
591 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
592 | ACCESSION M57869 M33245 |
---|
593 | KEYWORDS 18S ribosomal RNA. |
---|
594 | SOURCE A.castellanii (strain 001) ribosomal RNA. |
---|
595 | ORGANISM Acanthamoeba castellanii |
---|
596 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
597 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
598 | Acanthamoebidae. |
---|
599 | REFERENCE 1 (bases 1 to 223) |
---|
600 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
601 | Baverstock,P.R. |
---|
602 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
603 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
604 | STANDARD full automatic |
---|
605 | FEATURES Location/Qualifiers |
---|
606 | source 1..223 |
---|
607 | /organism="Acanthamoeba castellanii" |
---|
608 | BASE COUNT 61 a 42 c 55 g 43 t 22 others |
---|
609 | ORIGIN A region. |
---|
610 | 1 ncctgcccta tnaacttcga tggtaggata gaggcctacn tngtcgtaag gggnancgnn |
---|
611 | 61 naattagggn tncnattccg gaaanngagc ctgagaaatc ggctaccact tctaaggnng |
---|
612 | 121 gcagcaggcg cnnnaattac ccaatccgac nnggggaggt agtgacaata aataacnata |
---|
613 | 181 caggcgctcg acaagagtct tgtaattgga atgagtacaa ttt |
---|
614 | // |
---|
615 | LOCUS ACARRJJEE 209 bp ss-rRNA RNA 05-NOV-1990 |
---|
616 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
617 | ACCESSION M57870 M33246 |
---|
618 | KEYWORDS 18S ribosomal RNA. |
---|
619 | SOURCE A.castellanii (strain 151) ribosomal RNA. |
---|
620 | ORGANISM Acanthamoeba castellanii |
---|
621 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
622 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
623 | Acanthamoebidae. |
---|
624 | REFERENCE 1 (bases 1 to 209) |
---|
625 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
626 | Baverstock,P.R. |
---|
627 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
628 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
629 | STANDARD full automatic |
---|
630 | FEATURES Location/Qualifiers |
---|
631 | source 1..209 |
---|
632 | /organism="Acanthamoeba castellanii" |
---|
633 | BASE COUNT 50 a 40 c 51 g 40 t 28 others |
---|
634 | ORIGIN A region. |
---|
635 | 1 atggtaggat agaggcctac acatcggtcg taaccgggnn ccgnnnaatt agggttcgat |
---|
636 | 61 tccggaannn agcctgagaa atggctaccc acttctaagg nggcagcagg cgcnnnnatt |
---|
637 | 121 ccnnatccgn nncggggagn tagtgacaat aaataacnat acaggtctcg annngagtct |
---|
638 | 181 tgtnattggn atgagtacaa tttnnnccc |
---|
639 | // |
---|
640 | LOCUS ACARRJJEF 187 bp ss-rRNA RNA 05-NOV-1990 |
---|
641 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
642 | ACCESSION M57871 M33247 |
---|
643 | KEYWORDS 18S ribosomal RNA. |
---|
644 | SOURCE A.castellanii (strain 009) ribosomal RNA. |
---|
645 | ORGANISM Acanthamoeba castellanii |
---|
646 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
647 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
648 | Acanthamoebidae. |
---|
649 | REFERENCE 1 (bases 1 to 187) |
---|
650 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
651 | Baverstock,P.R. |
---|
652 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
653 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
654 | STANDARD full automatic |
---|
655 | FEATURES Location/Qualifiers |
---|
656 | source 1..187 |
---|
657 | /organism="Acanthamoeba castellanii" |
---|
658 | BASE COUNT 44 a 32 c 43 g 35 t 33 others |
---|
659 | ORIGIN A region. |
---|
660 | 1 gtcgtaancg ggnnncgnnn aatagggttc gattccggan nnngagcctg agaaatggct |
---|
661 | 61 nccacttcta agnnggcagc aggcgnnnnn attncccaat gccgnnnngg ggaantagtg |
---|
662 | 121 aacaataaat aacnatacag gtctcgannn gagtcttgta attggnatga gtacaatttn |
---|
663 | 181 nccccnt |
---|
664 | // |
---|
665 | LOCUS ACARRJJEG 247 bp ss-rRNA RNA 05-NOV-1990 |
---|
666 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
667 | ACCESSION M57872 M33248 |
---|
668 | KEYWORDS 18S ribosomal RNA. |
---|
669 | SOURCE A.castellanii (strain 013) ribosomal RNA. |
---|
670 | ORGANISM Acanthamoeba castellanii |
---|
671 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
672 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
673 | Acanthamoebidae. |
---|
674 | REFERENCE 1 (bases 1 to 247) |
---|
675 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
676 | Baverstock,P.R. |
---|
677 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
678 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
679 | STANDARD full automatic |
---|
680 | FEATURES Location/Qualifiers |
---|
681 | source 1..247 |
---|
682 | /organism="Acanthamoeba castellanii" |
---|
683 | BASE COUNT 49 a 41 c 58 g 47 t 52 others |
---|
684 | ORIGIN B region. |
---|
685 | 1 ganagttann nnatngaann cnatnngata annntcgtag tnnnnaccat aagaactgat |
---|
686 | 61 gtcnnagcgc agactgactt aatgnggagc agcgtgtgnt agtntcataa tactatccac |
---|
687 | 121 nantcggcgc ggtngtcctt ggcgtcngtc cnnttcaacg ggnnnnggcg nnaggncggt |
---|
688 | 181 ttagcnggtn nnaccggtga atgactcccc nngcngcttg tgagaaatca taagnnnntg |
---|
689 | 241 ggnnnnn |
---|
690 | // |
---|
691 | LOCUS ACARRJJEH 278 bp ss-rRNA RNA 05-NOV-1990 |
---|
692 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
693 | ACCESSION M57873 M33249 |
---|
694 | KEYWORDS 18S ribosomal RNA. |
---|
695 | SOURCE A.castellanii (strain 010) ribosomal RNA. |
---|
696 | ORGANISM Acanthamoeba castellanii |
---|
697 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
698 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
699 | Acanthamoebidae. |
---|
700 | REFERENCE 1 (bases 1 to 278) |
---|
701 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
702 | Baverstock,P.R. |
---|
703 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
704 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
705 | STANDARD full automatic |
---|
706 | FEATURES Location/Qualifiers |
---|
707 | source 1..278 |
---|
708 | /organism="Acanthamoeba castellanii" |
---|
709 | BASE COUNT 63 a 56 c 65 g 57 t 37 others |
---|
710 | ORIGIN B region. |
---|
711 | 1 ctgccaagca ctnnnttcaa ttantnaann nnganagtta agggaatacg aaggactgat |
---|
712 | 61 cagataacng tcgtaggtcn nnatctctat tacagacgaa ttgcnnagcg nancgattaa |
---|
713 | 121 ggaggangtg tggcatagtc atcaatacat acnccacnat cggcgcngtn gtccttggcg |
---|
714 | 181 gtgtctcngc ttcacggccn ngncgcgcna nggncggttt acgcnggtnn naccggtgaa |
---|
715 | 241 tgnctcccct agcagtcgtt gtgagaaatc ataagnnt |
---|
716 | // |
---|
717 | LOCUS ACARRJJEI 250 bp ss-rRNA RNA 05-NOV-1990 |
---|
718 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
719 | ACCESSION M57874 M33250 |
---|
720 | KEYWORDS 18S ribosomal RNA. |
---|
721 | SOURCE A.castellanii (strain 102) ribosomal RNA. |
---|
722 | ORGANISM Acanthamoeba castellanii |
---|
723 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
724 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
725 | Acanthamoebidae. |
---|
726 | REFERENCE 1 (bases 1 to 250) |
---|
727 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
728 | Baverstock,P.R. |
---|
729 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
730 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
731 | STANDARD full automatic |
---|
732 | FEATURES Location/Qualifiers |
---|
733 | source 1..250 |
---|
734 | /organism="Acanthamoeba castellanii" |
---|
735 | BASE COUNT 59 a 47 c 61 g 51 t 32 others |
---|
736 | ORIGIN B region. |
---|
737 | 1 ccattaatca aanngacaag ttgatgggga tcngaagaac gactcagact acngtgcgta |
---|
738 | 61 gtcnnnacca taaacgatgc ngacnagcga ttaggagaag cgttgagatc atcgacataa |
---|
739 | 121 ctacccacca tccggtgcgg tcggttcttn gnnngtcgtt ggnctcgcnn gnnnatggng |
---|
740 | 181 tnnnggggcn atttanctga tgnnatnggt gaatgnctcc cctagcagct tgtgagaaat |
---|
741 | 241 cataagnntn |
---|
742 | // |
---|
743 | LOCUS ACARRJJEJ 271 bp ss-rRNA RNA 05-NOV-1990 |
---|
744 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
745 | ACCESSION M57875 M33251 |
---|
746 | KEYWORDS 18S ribosomal RNA. |
---|
747 | SOURCE A.castellanii (strain 014) ribosomal RNA. |
---|
748 | ORGANISM Acanthamoeba castellanii |
---|
749 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
750 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
751 | Acanthamoebidae. |
---|
752 | REFERENCE 1 (bases 1 to 271) |
---|
753 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
754 | Baverstock,P.R. |
---|
755 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
756 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
757 | STANDARD full automatic |
---|
758 | FEATURES Location/Qualifiers |
---|
759 | source 1..271 |
---|
760 | /organism="Acanthamoeba castellanii" |
---|
761 | BASE COUNT 81 a 51 c 63 g 58 t 18 others |
---|
762 | ORIGIN B region. |
---|
763 | 1 atttagtgaa agattaccgt tctgcnagac acgcatctag ccaagagatg nnttcagtta |
---|
764 | 61 atcaaggnng aagacgtgta gcgggatcga gagacgatca gatacngtcg tagtcnnnag |
---|
765 | 121 cgcataaacg atgccgacca gcgattagga gacgttgaat acaaaacacc accatacata |
---|
766 | 181 attcagtaca tggccagtca aatggttgtg natnnnttgt gtatgnnacc ggtgaatgnc |
---|
767 | 241 tcccctagca gcttgtgaga aatcataagn n |
---|
768 | // |
---|
769 | LOCUS ACARRJJEK 248 bp ss-rRNA RNA 05-NOV-1990 |
---|
770 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
771 | ACCESSION M57876 M33252 |
---|
772 | KEYWORDS 18S ribosomal RNA. |
---|
773 | SOURCE A.castellanii (strain 001) ribosomal RNA. |
---|
774 | ORGANISM Acanthamoeba castellanii |
---|
775 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
776 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
777 | Acanthamoebidae. |
---|
778 | REFERENCE 1 (bases 1 to 248) |
---|
779 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
780 | Baverstock,P.R. |
---|
781 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
782 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
783 | STANDARD full automatic |
---|
784 | FEATURES Location/Qualifiers |
---|
785 | source 1..248 |
---|
786 | /organism="Acanthamoeba castellanii" |
---|
787 | BASE COUNT 70 a 47 c 56 g 58 t 17 others |
---|
788 | ORIGIN B region. |
---|
789 | 1 gcgaaagcat ctgccaagga ngnnttcatt aatcaagnng aaagttaggg gatcgaagac |
---|
790 | 61 gancagatnc ngtcgtagtc nnaccataaa cgatgccgac cagcgattag gagacgttga |
---|
791 | 121 atacaaaaca ccatccattt agcatggtcg ntttcaaata ttcctttttg cgaaggttgt |
---|
792 | 181 ttgggaacnn ttcgtcctga tgnatctggn gaatgactcc cctagcagct tgtgagaaat |
---|
793 | 241 cataagnn |
---|
794 | // |
---|
795 | LOCUS ACARRJJEL 217 bp ss-rRNA RNA 05-NOV-1990 |
---|
796 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
797 | ACCESSION M57877 M33253 |
---|
798 | KEYWORDS 18S ribosomal RNA. |
---|
799 | SOURCE A.castellanii (strain 151) ribosomal RNA. |
---|
800 | ORGANISM Acanthamoeba castellanii |
---|
801 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
802 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
803 | Acanthamoebidae. |
---|
804 | REFERENCE 1 (bases 1 to 217) |
---|
805 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
806 | Baverstock,P.R. |
---|
807 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
808 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
809 | STANDARD full automatic |
---|
810 | FEATURES Location/Qualifiers |
---|
811 | source 1..217 |
---|
812 | /organism="Acanthamoeba castellanii" |
---|
813 | BASE COUNT 49 a 48 c 52 g 43 t 25 others |
---|
814 | ORIGIN B region. |
---|
815 | 1 cattcaatca annnaaagta ggatcgaagt cgattagatn nngtcgtagt cttaaccata |
---|
816 | 61 aaccatgcca ccagcgattg ggcgacgttt cacnnggaag tggnnccggn ggggggcgcc |
---|
817 | 121 nctttgctct gtnnnnnagn ncngagcaga gcnnnnntcc tttgggctgc ttccactaaa |
---|
818 | 181 ggatgactcc cccagcagct tgtgagaaat catcaag |
---|
819 | // |
---|
820 | LOCUS ACARRJJEM 255 bp ss-rRNA RNA 05-NOV-1990 |
---|
821 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
822 | ACCESSION M57878 M33254 |
---|
823 | KEYWORDS 18S ribosomal RNA. |
---|
824 | SOURCE A.castellanii (strain 009) ribosomal RNA. |
---|
825 | ORGANISM Acanthamoeba castellanii |
---|
826 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
827 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
828 | Acanthamoebidae. |
---|
829 | REFERENCE 1 (bases 1 to 255) |
---|
830 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
831 | Baverstock,P.R. |
---|
832 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
833 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
834 | STANDARD full automatic |
---|
835 | FEATURES Location/Qualifiers |
---|
836 | source 1..255 |
---|
837 | /organism="Acanthamoeba castellanii" |
---|
838 | BASE COUNT 62 a 53 c 67 g 56 t 17 others |
---|
839 | ORIGIN B region. |
---|
840 | 1 ttatgaaaga ttacttctgc gaaagcatct gccaaggatg ttttcattaa tcaagnngaa |
---|
841 | 61 agttagggga tcgaagacga ttagatacng tcgtagtctt aaccataaac catgccgacc |
---|
842 | 121 agcgattggg ngacgtttca cacggaggtt ggcncgggcg ccgtgccnnt gtcgcgcaag |
---|
843 | 181 cggcaggcgc gannnntttt gggcngcttc cnctnaagga tgactccnnn agcagcttgt |
---|
844 | 241 gagaaatcat caagt |
---|
845 | // |
---|
846 | LOCUS ACARRJJEN 108 bp ss-rRNA RNA 05-NOV-1990 |
---|
847 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
848 | ACCESSION M57879 M33255 |
---|
849 | KEYWORDS 18S ribosomal RNA. |
---|
850 | SOURCE A.castellanii (strain 013) ribosomal RNA. |
---|
851 | ORGANISM Acanthamoeba castellanii |
---|
852 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
853 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
854 | Acanthamoebidae. |
---|
855 | REFERENCE 1 (bases 1 to 108) |
---|
856 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
857 | Baverstock,P.R. |
---|
858 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
859 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
860 | STANDARD full automatic |
---|
861 | FEATURES Location/Qualifiers |
---|
862 | source 1..108 |
---|
863 | /organism="Acanthamoeba castellanii" |
---|
864 | BASE COUNT 20 a 17 c 16 g 30 t 25 others |
---|
865 | ORIGIN C region. |
---|
866 | 1 cngnnnnann tnttgcaaan tttnatcgtn ctncngatng ctcnntgtaa ttnttagatg |
---|
867 | 61 ctatcganan gnnnnattcc tngtaatncc gagtactatg cagtcgtc |
---|
868 | // |
---|
869 | LOCUS ACARRJJEO 131 bp ss-rRNA RNA 05-NOV-1990 |
---|
870 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
871 | ACCESSION M57880 M33256 |
---|
872 | KEYWORDS 18S ribosomal RNA. |
---|
873 | SOURCE A.castellanii (strain 010) ribosomal RNA. |
---|
874 | ORGANISM Acanthamoeba castellanii |
---|
875 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
876 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
877 | Acanthamoebidae. |
---|
878 | REFERENCE 1 (bases 1 to 131) |
---|
879 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
880 | Baverstock,P.R. |
---|
881 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
882 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
883 | STANDARD full automatic |
---|
884 | FEATURES Location/Qualifiers |
---|
885 | source 1..131 |
---|
886 | /organism="Acanthamoeba castellanii" |
---|
887 | BASE COUNT 26 a 16 c 32 g 37 t 20 others |
---|
888 | ORIGIN C region. |
---|
889 | 1 gncggctgan tcnnnnatnt ggcagcntgg gcnnanaggt ctgnnnnatc tttgcaaatt |
---|
890 | 61 taatcgtgct tggggataga tcattgtaat tattgatgnt tcgaagnngg nattcctagt |
---|
891 | 121 tatangcgag t |
---|
892 | // |
---|
893 | LOCUS ACARRJJEP 111 bp ss-rRNA RNA 05-NOV-1990 |
---|
894 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
895 | ACCESSION M57881 M33257 |
---|
896 | KEYWORDS 18S ribosomal RNA. |
---|
897 | SOURCE A.castellanii (strain 102) ribosomal RNA. |
---|
898 | ORGANISM Acanthamoeba castellanii |
---|
899 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
900 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
901 | Acanthamoebidae. |
---|
902 | REFERENCE 1 (bases 1 to 111) |
---|
903 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
904 | Baverstock,P.R. |
---|
905 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
906 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
907 | STANDARD full automatic |
---|
908 | FEATURES Location/Qualifiers |
---|
909 | source 1..111 |
---|
910 | /organism="Acanthamoeba castellanii" |
---|
911 | BASE COUNT 24 a 15 c 22 g 32 t 18 others |
---|
912 | ORIGIN C region. |
---|
913 | 1 gtngtcnnng atngncctgg gcnnataggt cagnnnnatc tttncaaatt taatcgtgct |
---|
914 | 61 ggggatanat cattgtaatt attgatcttc aannnggnat tcctagtaag c |
---|
915 | // |
---|
916 | LOCUS ACARRJJEQ 141 bp ss-rRNA RNA 05-NOV-1990 |
---|
917 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
918 | ACCESSION M57882 M33258 |
---|
919 | KEYWORDS 18S ribosomal RNA. |
---|
920 | SOURCE A.castellanii (strain 014) ribosomal RNA. |
---|
921 | ORGANISM Acanthamoeba castellanii |
---|
922 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
923 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
924 | Acanthamoebidae. |
---|
925 | REFERENCE 1 (bases 1 to 141) |
---|
926 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
927 | Baverstock,P.R. |
---|
928 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
929 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
930 | STANDARD full automatic |
---|
931 | FEATURES Location/Qualifiers |
---|
932 | source 1..141 |
---|
933 | /organism="Acanthamoeba castellanii" |
---|
934 | BASE COUNT 28 a 24 c 33 g 42 t 14 others |
---|
935 | ORIGIN C region. |
---|
936 | 1 ggngtcaanc cgtatcgtat gttgctgtcc nngatntgcg cctgggccga taggtccgnn |
---|
937 | 61 nnatctttnc aaatttaatc gtgcttgggg atagatcatt gtaattattg atcttcaann |
---|
938 | 121 nggnattcct agtaagcgag t |
---|
939 | // |
---|
940 | LOCUS ACARRJJER 237 bp ss-rRNA RNA 05-NOV-1990 |
---|
941 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
942 | ACCESSION M57883 M33259 |
---|
943 | KEYWORDS 18S ribosomal RNA. |
---|
944 | SOURCE A.castellanii (strain 001) ribosomal RNA. |
---|
945 | ORGANISM Acanthamoeba castellanii |
---|
946 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
947 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
948 | Acanthamoebidae. |
---|
949 | REFERENCE 1 (bases 1 to 237) |
---|
950 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
951 | Baverstock,P.R. |
---|
952 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
953 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
954 | STANDARD full automatic |
---|
955 | FEATURES Location/Qualifiers |
---|
956 | source 1..237 |
---|
957 | /organism="Acanthamoeba castellanii" |
---|
958 | BASE COUNT 49 a 43 c 46 g 67 t 32 others |
---|
959 | ORIGIN C region. |
---|
960 | 1 nnnnagatnt nctcgggnnc angcgcgcta cactgattaa ttcaacgagt cnncttcaan |
---|
961 | 61 cnaggcgtag atnngttttg gtttgtgtna gncatcaacc aanactattt ctgcncttcc |
---|
962 | 121 nnnatcgcgc ctgggccgat aggttctggn naatctttgc aaatttaact nctgtgctng |
---|
963 | 181 gggatagatc tacttgtaat tattgatctt caantnggna ttcctagtaa ngnnagt |
---|
964 | // |
---|
965 | LOCUS ACARRJJES 174 bp ss-rRNA RNA 05-NOV-1990 |
---|
966 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
967 | ACCESSION M57884 M33260 |
---|
968 | KEYWORDS 18S ribosomal RNA. |
---|
969 | SOURCE A.castellanii (strain 151) ribosomal RNA. |
---|
970 | ORGANISM Acanthamoeba castellanii |
---|
971 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
972 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
973 | Acanthamoebidae. |
---|
974 | REFERENCE 1 (bases 1 to 174) |
---|
975 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
976 | Baverstock,P.R. |
---|
977 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
978 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
979 | STANDARD full automatic |
---|
980 | FEATURES Location/Qualifiers |
---|
981 | source 1..174 |
---|
982 | /organism="Acanthamoeba castellanii" |
---|
983 | BASE COUNT 33 a 30 c 45 g 42 t 24 others |
---|
984 | ORIGIN C region. |
---|
985 | 1 gcttgcgctc anaaggactg ggtccttcgt ncangnnagc ggggaggcgg cngnnctngt |
---|
986 | 61 ccctgggccg ataggatcta gnnnaatcct tgtgaaattt aatccgtgct ggggatagat |
---|
987 | 121 cattgtaatt attgatcttc annnnggnat tcctagtaan gnnagtnnnn agct |
---|
988 | // |
---|
989 | LOCUS ACARRJJET 210 bp ss-rRNA RNA 05-NOV-1990 |
---|
990 | DEFINITION A.castellanii 18S ribosomal RNA. |
---|
991 | ACCESSION M57885 M33261 |
---|
992 | KEYWORDS 18S ribosomal RNA. |
---|
993 | SOURCE A.castellanii (strain 009) ribosomal RNA. |
---|
994 | ORGANISM Acanthamoeba castellanii |
---|
995 | Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina; |
---|
996 | Rhizopoda; Lobosa; Gymnamoeba; Amoebida; Acanthopodina; |
---|
997 | Acanthamoebidae. |
---|
998 | REFERENCE 1 (bases 1 to 210) |
---|
999 | AUTHORS Johnson,A.M., Fielke,R., Christy,P.E., Robinson,B. and |
---|
1000 | Baverstock,P.R. |
---|
1001 | TITLE Small subunit ribosomal RNA evolution in the genus Acanthamoeba |
---|
1002 | JOURNAL J. Gen. Microbiol. 136, 1689-1698 (1990) |
---|
1003 | STANDARD full automatic |
---|
1004 | FEATURES Location/Qualifiers |
---|
1005 | source 1..210 |
---|
1006 | /organism="Acanthamoeba castellanii" |
---|
1007 | BASE COUNT 36 a 40 c 52 g 57 t 25 others |
---|
1008 | ORIGIN C region. |
---|
1009 | 1 attaattcca cgagttccac tgcnncntng tacgtgggtg gngcgtcgtn ctctgagatc |
---|
1010 | 61 gacaaggctg gtngtgcggc ntcgtnntgc ggcngcnctn tccctgggcc gataggtctg |
---|
1011 | 121 nnnnatcttt gtgaaattta atcgtgctcg gggatagatc attgtaatta ttgatcttca |
---|
1012 | 181 nnnnggnatt cctagtaang nnagtcatca |
---|
1013 | // |
---|
1014 | LOCUS ACCRRSAA 1536 bp ss-rRNA RNA 15-SEP-1990 |
---|
1015 | DEFINITION A.calcoaceticus 16S ribosomal RNA. |
---|
1016 | ACCESSION M34139 |
---|
1017 | KEYWORDS 16S ribosomal RNA. |
---|
1018 | SOURCE A.calcoaceticus (strain 33604) ribosomal RNA. |
---|
1019 | ORGANISM Acinetobacter calcoaceticus |
---|
1020 | Prokaryotae; Gracilicutes; Scotobacteria; Neisseriaceae. |
---|
1021 | REFERENCE 1 (bases 1 to 1536) |
---|
1022 | AUTHORS Woese,C.R. |
---|
1023 | JOURNAL Unpublished (1990) |
---|
1024 | STANDARD full automatic |
---|
1025 | COMMENT Draft entry and computer-readable sequence for [1] kindly submitted |
---|
1026 | by C.R.Woese, 09-MAY-1990. |
---|
1027 | |
---|
1028 | Author address: C.R.Woese |
---|
1029 | University of Illinois |
---|
1030 | Dept. Microbiology |
---|
1031 | 131 Burrill Hall |
---|
1032 | 407 S. Goodwin Ave. |
---|
1033 | Urbana, IL 61801 |
---|
1034 | (217) 333-9369. |
---|
1035 | FEATURES Location/Qualifiers |
---|
1036 | rRNA 1..1536 |
---|
1037 | /note="16S ribosomal RNA" |
---|
1038 | source 1..1536 |
---|
1039 | /organism="Acinetobacter calcoaceticus" |
---|
1040 | BASE COUNT 387 a 329 c 460 g 330 t 30 others |
---|
1041 | ORIGIN |
---|
1042 | 1 ttaactgaag agtttgatca tggctcagat tgaacgctgg cggcaggctt aacacatgca |
---|
1043 | 61 agtcgagcgg ggaaggttgc ttcggtaact gactagcggc ggacgggtga gtaatgctta |
---|
1044 | 121 ggaatctgcc atttagtggg ggacaacatt ccgaanggaa tgctaatacc gcatacgtcc |
---|
1045 | 181 tacaggagaa agcaggggat ctccggacct tgcgctaaat gatgagccta agtcggatta |
---|
1046 | 241 gctagttggt ggggtaaagg cctaccaagg cgacgatctg tagcgggtct gagaggatga |
---|
1047 | 301 tccgccacac tgggactgag acacggccca gactcctacg ggaggcagca gtggggaata |
---|
1048 | 361 ttggacaatg ggcgcaagcc ngatccagcc atgccgcgtg tgtgaagaag gccttttggt |
---|
1049 | 421 tgtaaagcac tttaagcgag gaggaggctc tcttagttaa tacctaagat gagtggacgt |
---|
1050 | 481 tactcgcaga ataagcaccg gctaactctg tgccagcagc cgcggtaata cagagngtgc |
---|
1051 | 541 gagcgttaat cggatttact gggcgtaaag cgtgcgtagg cggcttttta agtcggatgt |
---|
1052 | 601 gaaatccccg agcttaactt gggaattgca ttcgatactg ggaagctaga gtatgggaga |
---|
1053 | 661 ggatggtaga attccaggtg tagcggtgaa atgcgtagag atctggagga ataccgatgg |
---|
1054 | 721 cgaaggcagc catctggcct aatactgacg ctgaggtacg naagcatggg gagcaaacag |
---|
1055 | 781 gattagatac cctggtagtc catgccgtaa acgatgtcta ctagccgttg gggcctttga |
---|
1056 | 841 ggctttagtg gcgcagctaa cgcgataagt agactgcctg gggagtacgg tcgcaagact |
---|
1057 | 901 aaaactcaaa tgaattgacg ggggcncgca caagcggtgg agcatgtggt ttaattcgat |
---|
1058 | 961 gcaacgcgaa gaaccttacc tggccttgac atactagaaa ctttccagag atggattggt |
---|
1059 | 1021 gccttcggga atctagatac aggtgctgca tggctgtcgt cagctcgtgt cgtgagatgt |
---|
1060 | 1081 tgggttaagt cccgcaacga gcgcaaccct tttccttact tgccagcatt tcggatggga |
---|
1061 | 1141 actttaagga tactgccagt gacaaactgg aggaaggcgg ggacgacgtc aagtcatcat |
---|
1062 | 1201 ggcccttacg gctagggcta cacacgtgct acaatggtcg gtacaaaggg ttgctaccta |
---|
1063 | 1261 gcgataggat gctaatctca aaaagccgat cgtagttcgg attggagtct gcaactcgac |
---|
1064 | 1321 tccatgaagt cggaatcgct agtaatcgcg gatcagaatg ccgcggtgaa tacgttcccg |
---|
1065 | 1381 ggccttgtac acaccgcccg tcacaccatg ggagtttgtt gcaccagaag tagctagcct |
---|
1066 | 1441 aactgcaaag agggcggtta ccacggtgtg gccgatgact agggnnnnnn ngtaacaagn |
---|
1067 | 1501 nnnnnnnnnn ngaacctgnn nnnngatcac ctcctt |
---|
1068 | // |
---|
1069 | LOCUS ACDRRAAC 122 bp ss-rRNA RNA 15-MAR-1988 |
---|
1070 | DEFINITION Acidiphilium cryptum 5S ribosomal RNA. |
---|
1071 | ACCESSION M11545 |
---|
1072 | KEYWORDS 5S ribosomal RNA. |
---|
1073 | SOURCE Acidiphilium cryptum (ATCC 33463) ribosomal RNA. |
---|
1074 | ORGANISM Acidiphilium cryptum |
---|
1075 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1076 | Alcaligenaceae. |
---|
1077 | REFERENCE 1 (bases 1 to 122) |
---|
1078 | AUTHORS Lane,D.J., Stahl,D.A., Olsen,G.J., Heller,D.J. and Pace,N.R. |
---|
1079 | TITLE Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira |
---|
1080 | by 5S rRNA sequences |
---|
1081 | JOURNAL J. Bacteriol. 163, 75-81 (1985) |
---|
1082 | STANDARD full automatic |
---|
1083 | FEATURES Location/Qualifiers |
---|
1084 | rRNA 1..122 |
---|
1085 | /note="5S ribosomal RNA" |
---|
1086 | source 1..122 |
---|
1087 | /organism="Acidiphilium cryptum" |
---|
1088 | BASE COUNT 22 a 44 c 37 g 19 t |
---|
1089 | ORIGIN 5' end of mature 5S rRNA. |
---|
1090 | 1 cgacctggtg gccattgcgg ggagcctgca cccgatccca tcccgaactc ggccgtgaaa |
---|
1091 | 61 atccccagcg cccatggtac tgtgcctcaa ggcacgggag agtaggtcgc cgccaggtcc |
---|
1092 | 121 tc |
---|
1093 | // |
---|
1094 | LOCUS ACDRRDA01 316 bp ss-rRNA RNA 24-JUN-1993 |
---|
1095 | DEFINITION Acidiphilium angustum 16S rRNA sequence. |
---|
1096 | ACCESSION M79363 |
---|
1097 | KEYWORDS 16S ribosomal RNA. |
---|
1098 | SEGMENT 1 of 3 |
---|
1099 | SOURCE Acidiphilium angustum (library: ATCC 35903) rRNA. |
---|
1100 | ORGANISM Acidiphilium angustum |
---|
1101 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1102 | Alcaligenaceae. |
---|
1103 | REFERENCE 1 (bases 1 to 316) |
---|
1104 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1105 | Olsen,G.J. and Pace,N.R. |
---|
1106 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1107 | eubacteria |
---|
1108 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1109 | STANDARD full automatic |
---|
1110 | FEATURES Location/Qualifiers |
---|
1111 | rRNA 1..316 |
---|
1112 | /product="16S ribosomal RNA" |
---|
1113 | /gene="16S rRNA" |
---|
1114 | /partial |
---|
1115 | source 1..316 |
---|
1116 | /organism="Acidiphilium angustum" |
---|
1117 | /sequenced_mol="rRNA" |
---|
1118 | /tissue_lib="ATCC 35903" |
---|
1119 | BASE COUNT 77 a 65 c 98 g 58 t 18 others |
---|
1120 | ORIGIN |
---|
1121 | 1 aanctacggc taatacngca taatgcctga gggcnaaaga cgtaagtcgt cttggnagga |
---|
1122 | 61 gcctgcgtct gattaggtag ttggtggggt aaaggcctac nnagccnncg atcagtagct |
---|
1123 | 121 ngtctgagag gatgatcagc cacattggga ctgagacacg gccnnaactc ctacgggagg |
---|
1124 | 181 cagcagtggg gaatattgga caatgggggc aacccnnatc cagcaatgcc gcgtgggtga |
---|
1125 | 241 agaaggtntt cggattgtaa agccnntttg gcggggacga tgatgacggt acccgcagaa |
---|
1126 | 301 taagctccgg cnnact |
---|
1127 | // |
---|
1128 | LOCUS ACDRRDA02 321 bp ss-rRNA RNA 24-JUN-1993 |
---|
1129 | DEFINITION Acidiphilium angustum 16S rRNA sequence. |
---|
1130 | ACCESSION M79364 |
---|
1131 | KEYWORDS 16S ribosomal RNA. |
---|
1132 | SEGMENT 2 of 3 |
---|
1133 | SOURCE Acidiphilium angustum (library: ATCC 35903) rRNA. |
---|
1134 | ORGANISM Acidiphilium angustum |
---|
1135 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1136 | Alcaligenaceae. |
---|
1137 | REFERENCE 1 (bases 1 to 321) |
---|
1138 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1139 | Olsen,G.J. and Pace,N.R. |
---|
1140 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1141 | eubacteria |
---|
1142 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1143 | STANDARD full automatic |
---|
1144 | FEATURES Location/Qualifiers |
---|
1145 | rRNA 1..321 |
---|
1146 | /product="16S ribosomal RNA" |
---|
1147 | /gene="16S rRNA" |
---|
1148 | /partial |
---|
1149 | source 1..321 |
---|
1150 | /organism="Acidiphilium angustum" |
---|
1151 | /sequenced_mol="rRNA" |
---|
1152 | /tissue_lib="ATCC 35903" |
---|
1153 | BASE COUNT 76 a 63 c 98 g 71 t 13 others |
---|
1154 | ORIGIN |
---|
1155 | 1 cgtaggcgct tacatagtta ggcgtgaaat tcctnggctc aacctgggnc tgcgtctnat |
---|
1156 | 61 acatgtagcn ygagtgtgaa agagggtcgt sgaatttcca gtgtagaggt gaaattcgta |
---|
1157 | 121 gatattggaa agaacaccgg tggcgaaggc ggcgacctng ttcattactg acgctgaggc |
---|
1158 | 181 gcnaaagcgt ggggagcaaa caggattaga taccctngta gtccacgctg taaacgatgt |
---|
1159 | 241 gtsctsgatg ttggggtgct tagcacttca gtgtcgtast aacgcggtaa gcacaccgcc |
---|
1160 | 301 tngggagtac ggccgcaagg t |
---|
1161 | // |
---|
1162 | LOCUS ACDRRDA03 339 bp ss-rRNA RNA 24-JUN-1993 |
---|
1163 | DEFINITION Acidiphilium angustum 16S rRNA sequence. |
---|
1164 | ACCESSION M79365 |
---|
1165 | KEYWORDS 16S ribosomal RNA. |
---|
1166 | SEGMENT 3 of 3 |
---|
1167 | SOURCE Acidiphilium angustum (library: ATCC 35903) rRNA. |
---|
1168 | ORGANISM Acidiphilium angustum |
---|
1169 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1170 | Alcaligenaceae. |
---|
1171 | REFERENCE 1 (bases 1 to 339) |
---|
1172 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1173 | Olsen,G.J. and Pace,N.R. |
---|
1174 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1175 | eubacteria |
---|
1176 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1177 | STANDARD full automatic |
---|
1178 | FEATURES Location/Qualifiers |
---|
1179 | rRNA 1..339 |
---|
1180 | /product="16S ribosomal RNA" |
---|
1181 | /gene="16S rRNA" |
---|
1182 | /partial |
---|
1183 | source 1..339 |
---|
1184 | /organism="Acidiphilium angustum" |
---|
1185 | /sequenced_mol="rRNA" |
---|
1186 | /tissue_lib="ATCC 35903" |
---|
1187 | BASE COUNT 72 a 83 c 103 g 74 t 7 others |
---|
1188 | ORIGIN |
---|
1189 | 1 acaggtgctg catggctgtc gtcagctcgt gtcgtgagat gttgggttaa gtcccgcaac |
---|
1190 | 61 gagcgcaacc ctcgccttta gttgccagca cgtttgggtg ggnactctag aggaactgcc |
---|
1191 | 121 ggtgacaagc cggaggaagg tgggnatgac gtcaagtcct catggccctt atgtcctggg |
---|
1192 | 181 ctacacacgt gctacaatgg cggtgacagt gggaagccaa gcagcgatgc tnagctnatc |
---|
1193 | 241 ctgaaaagcc gtctcagttc ggattgcact ctgcaactcg ggtgcatgaa ggtggaatcg |
---|
1194 | 301 ctagtaatcg cggatcagca tgccgcngtn aatacnttc |
---|
1195 | // |
---|
1196 | LOCUS ACDRRDD01 315 bp ss-rRNA RNA 24-JUN-1993 |
---|
1197 | DEFINITION Acidiphilium cryptum 16S rRNA sequence. |
---|
1198 | ACCESSION M79366 |
---|
1199 | KEYWORDS 16S ribosomal RNA. |
---|
1200 | SEGMENT 1 of 3 |
---|
1201 | SOURCE Acidiphilium cryptum (library: ATCC 33463) rRNA. |
---|
1202 | ORGANISM Acidiphilium cryptum |
---|
1203 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1204 | Alcaligenaceae. |
---|
1205 | REFERENCE 1 (bases 1 to 315) |
---|
1206 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1207 | Olsen,G.J. and Pace,N.R. |
---|
1208 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1209 | eubacteria |
---|
1210 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1211 | STANDARD full automatic |
---|
1212 | FEATURES Location/Qualifiers |
---|
1213 | rRNA 1..315 |
---|
1214 | /product="16S ribosomal RNA" |
---|
1215 | /gene="16S rRNA" |
---|
1216 | /partial |
---|
1217 | source 1..315 |
---|
1218 | /organism="Acidiphilium cryptum" |
---|
1219 | /sequenced_mol="rRNA" |
---|
1220 | /tissue_lib="ATCC 33463" |
---|
1221 | BASE COUNT 78 a 68 c 99 g 57 t 13 others |
---|
1222 | ORIGIN |
---|
1223 | 1 aaactacgnc taatacngca tgatcctgag gggcaaagnn nnaagtcgcc tgaggaggag |
---|
1224 | 61 cctgcgtctg attaggtagt tggtggggta aaggcctacc aagcctncga tcagtagctg |
---|
1225 | 121 gtctgagagg atgatcagcc acactgggac tgagacacgg cccngactcc tacgggaggc |
---|
1226 | 181 agcagtgggg aatattggac aatgggcgaa agcctnatcc agcaatgccg cgtggatgaa |
---|
1227 | 241 gaaggtcttc ggattgtaaa gtccntttgg cggggacgat gatgacggta cccgcagaat |
---|
1228 | 301 aagctccggc nnnct |
---|
1229 | // |
---|
1230 | LOCUS ACDRRDD02 350 bp ss-rRNA RNA 24-JUN-1993 |
---|
1231 | DEFINITION Acidiphilium cryptum 16S rRNA sequence. |
---|
1232 | ACCESSION M79367 |
---|
1233 | KEYWORDS 16S ribosomal RNA. |
---|
1234 | SEGMENT 2 of 3 |
---|
1235 | SOURCE Acidiphilium cryptum (library: ATCC 33463) rRNA. |
---|
1236 | ORGANISM Acidiphilium cryptum |
---|
1237 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1238 | Alcaligenaceae. |
---|
1239 | REFERENCE 1 (bases 1 to 350) |
---|
1240 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1241 | Olsen,G.J. and Pace,N.R. |
---|
1242 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1243 | eubacteria |
---|
1244 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1245 | STANDARD full automatic |
---|
1246 | FEATURES Location/Qualifiers |
---|
1247 | rRNA 1..350 |
---|
1248 | /product="16S ribosomal RNA" |
---|
1249 | /gene="16S rRNA" |
---|
1250 | /partial |
---|
1251 | source 1..350 |
---|
1252 | /organism="Acidiphilium cryptum" |
---|
1253 | /sequenced_mol="rRNA" |
---|
1254 | /tissue_lib="ATCC 33463" |
---|
1255 | BASE COUNT 79 a 71 c 122 g 74 t 4 others |
---|
1256 | ORIGIN |
---|
1257 | 1 agcgttgctc ggaatgactg ggcgtaaagg gcgcgtaggc ggacggcaca gtcaggcgtg |
---|
1258 | 61 aaattcctgg gctcaacctg ggnctgcgtc tgagacgtgt tgtcttgagt atggaagagg |
---|
1259 | 121 gttgtggaat ttccagtgta gaggtgaaat tcgtagatat tggaaagaac accggtggcg |
---|
1260 | 181 aaggcggcaa cctggtccat tnctgacgct gaggcgcgaa agcgtgggga gcaaacagga |
---|
1261 | 241 ttagataccc tggtagtcca cgctgtaaac gatgtgtgct ggatgttggg gtgcttagca |
---|
1262 | 301 cttcagtgtc gtacgtaacg cggtaagcac accgccnngg gagtacggcc |
---|
1263 | // |
---|
1264 | LOCUS ACDRRDD03 303 bp ss-rRNA RNA 24-JUN-1993 |
---|
1265 | DEFINITION Acidiphilium cryptum 16S rRNA sequence. |
---|
1266 | ACCESSION M79368 |
---|
1267 | KEYWORDS 16S ribosomal RNA. |
---|
1268 | SEGMENT 3 of 3 |
---|
1269 | SOURCE Acidiphilium cryptum (library: ATCC 33463) rRNA. |
---|
1270 | ORGANISM Acidiphilium cryptum |
---|
1271 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1272 | Alcaligenaceae. |
---|
1273 | REFERENCE 1 (bases 1 to 303) |
---|
1274 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1275 | Olsen,G.J. and Pace,N.R. |
---|
1276 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1277 | eubacteria |
---|
1278 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1279 | STANDARD full automatic |
---|
1280 | FEATURES Location/Qualifiers |
---|
1281 | rRNA 1..303 |
---|
1282 | /product="16S ribosomal RNA" |
---|
1283 | /gene="16S rRNA" |
---|
1284 | /partial |
---|
1285 | source 1..303 |
---|
1286 | /organism="Acidiphilium cryptum" |
---|
1287 | /sequenced_mol="rRNA" |
---|
1288 | /tissue_lib="ATCC 33463" |
---|
1289 | BASE COUNT 62 a 72 c 97 g 66 t 6 others |
---|
1290 | ORIGIN |
---|
1291 | 1 tgtcgtgaga tgttgggtta agtccgcaac gagcgcaacc ctcgccntca gttgccagca |
---|
1292 | 61 tgtttgggtg ggcactctga aggaactgcc ggtgacaagc cggaggaagg tggggatgac |
---|
1293 | 121 gtcaagtcct catggcccnt atgtcctggg ctacacacgt gctactatgg cggtgacwgt |
---|
1294 | 181 gggaagccag gtggtgacac cgagctgatc tcaaaaagcc gnctcwgttc ggattgcact |
---|
1295 | 241 ctgctactcg agtgcatgaa ggtggaatcg ctagttatcg cggatctgca tgcngcggtg |
---|
1296 | 301 aat |
---|
1297 | // |
---|
1298 | LOCUS ACDRRDG01 264 bp ss-rRNA RNA 24-JUN-1993 |
---|
1299 | DEFINITION Acidiphilium facilis 16S rRNA sequence. |
---|
1300 | ACCESSION M79369 |
---|
1301 | KEYWORDS 16S ribosomal RNA. |
---|
1302 | SEGMENT 1 of 3 |
---|
1303 | SOURCE Acidiphilium facilis (library: ATCC 35904) rRNA. |
---|
1304 | ORGANISM Acidiphilium facilis |
---|
1305 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1306 | Alcaligenaceae. |
---|
1307 | REFERENCE 1 (bases 1 to 264) |
---|
1308 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1309 | Olsen,G.J. and Pace,N.R. |
---|
1310 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1311 | eubacteria |
---|
1312 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1313 | STANDARD full automatic |
---|
1314 | FEATURES Location/Qualifiers |
---|
1315 | rRNA 1..264 |
---|
1316 | /product="16S ribosomal RNA" |
---|
1317 | /gene="16S rRNA" |
---|
1318 | /partial |
---|
1319 | source 1..264 |
---|
1320 | /organism="Acidiphilium facilis" |
---|
1321 | /sequenced_mol="rRNA" |
---|
1322 | /tissue_lib="ATCC 35904" |
---|
1323 | BASE COUNT 60 a 54 c 75 g 46 t 29 others |
---|
1324 | ORIGIN |
---|
1325 | 1 aggagcctgc gtctgattag ctkgttggtg gggtnaaggc ctaccaagnn nnckatcagt |
---|
1326 | 61 agctggtctg agaggatgat cagccacatt gggactgaga cacggccnna actcctacgg |
---|
1327 | 121 gaggcagcag tgggmmatat tggacaatgg gcgcaagcch matccagcaa tgccgmgtgt |
---|
1328 | 181 gtgaagaagg hmhhcnnatt gtaaagcach httggcangg mctgattgat gacggtacch |
---|
1329 | 241 mcagaataag ccccvgchma cttc |
---|
1330 | // |
---|
1331 | LOCUS ACDRRDG02 313 bp ss-rRNA RNA 24-JUN-1993 |
---|
1332 | DEFINITION Acidiphilium facilis 16S rRNA sequence. |
---|
1333 | ACCESSION M79370 |
---|
1334 | KEYWORDS 16S ribosomal RNA. |
---|
1335 | SEGMENT 2 of 3 |
---|
1336 | SOURCE Acidiphilium facilis (library: ATCC 35904) rRNA. |
---|
1337 | ORGANISM Acidiphilium facilis |
---|
1338 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1339 | Alcaligenaceae. |
---|
1340 | REFERENCE 1 (bases 1 to 313) |
---|
1341 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1342 | Olsen,G.J. and Pace,N.R. |
---|
1343 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1344 | eubacteria |
---|
1345 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1346 | STANDARD full automatic |
---|
1347 | FEATURES Location/Qualifiers |
---|
1348 | rRNA 1..313 |
---|
1349 | /product="16S ribosomal RNA" |
---|
1350 | /partial |
---|
1351 | source 1..313 |
---|
1352 | /organism="Acidiphilium facilis" |
---|
1353 | /sequenced_mol="rRNA" |
---|
1354 | /tissue_lib="ATCC 35904" |
---|
1355 | BASE COUNT 83 a 59 c 97 g 69 t 5 others |
---|
1356 | ORIGIN |
---|
1357 | 1 tgtacagtca gaagtgaaat tcctggctca acctgggnac tgcttttgat acgtgcaagc |
---|
1358 | 61 tagagtgagg aagagggttg tggaatttcc agtgtagagg tgaaattcgt agatattgga |
---|
1359 | 121 aagaacaccg gtggcgaagg cggcaacctg gtcctnaact gacgctgagg cgcnaaagcg |
---|
1360 | 181 tggggagcaa acaggattag ataccctrgt agtccacgct gtaaacgatg tgtgctagat |
---|
1361 | 241 gttggggaac ttagtttctc agtgtcgtac gtaacgcgat aagcacacag cctrgggagt |
---|
1362 | 301 acggccgcaa ggt |
---|
1363 | // |
---|
1364 | LOCUS ACDRRDG03 345 bp ss-rRNA RNA 24-JUN-1993 |
---|
1365 | DEFINITION Acidiphilium facilis 16S rRNA sequence. |
---|
1366 | ACCESSION M79371 |
---|
1367 | KEYWORDS 16S ribosomal RNA. |
---|
1368 | SEGMENT 3 of 3 |
---|
1369 | SOURCE Acidiphilium facilis (library: ATCC 35904) rRNA. |
---|
1370 | ORGANISM Acidiphilium facilis |
---|
1371 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1372 | Alcaligenaceae. |
---|
1373 | REFERENCE 1 (bases 1 to 345) |
---|
1374 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1375 | Olsen,G.J. and Pace,N.R. |
---|
1376 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1377 | eubacteria |
---|
1378 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1379 | STANDARD full automatic |
---|
1380 | FEATURES Location/Qualifiers |
---|
1381 | rRNA 1..345 |
---|
1382 | /product="16S ribosomal RNA" |
---|
1383 | /partial |
---|
1384 | source 1..345 |
---|
1385 | /organism="Acidiphilium facilis" |
---|
1386 | /sequenced_mol="rRNA" |
---|
1387 | /tissue_lib="ATCC 35904" |
---|
1388 | BASE COUNT 76 a 84 c 97 g 86 t 2 others |
---|
1389 | ORIGIN |
---|
1390 | 1 ccttccgaca ggtgctgcat ggctgtcgtc agctcgtgtc gtgagatgtt gggttaagtc |
---|
1391 | 61 ccgcaacgag cgcaaccctt gcctttagtt gccatcattt agttgggcac tctacaggaa |
---|
1392 | 121 ctgccggtga caagccggag gaaggtgggg atgacgtcaa gtcctcatgg cccttatgtc |
---|
1393 | 181 ctgggctaca cacgtgctac aatggtggtg acagtgggaa gctaggtagt gataccgtgc |
---|
1394 | 241 tcatctctaa aagccatctc agttcagatt gtactctgca actcgagtmc atgaaggtgg |
---|
1395 | 301 aatcgctagt aatcgtggat cagcatgcca cggtnaatac gttcc |
---|
1396 | // |
---|
1397 | LOCUS ACDRRDJ01 363 bp ss-rRNA RNA 24-JUN-1993 |
---|
1398 | DEFINITION Acidiphilium rubrum 16S rRNA sequence. |
---|
1399 | ACCESSION M79377 |
---|
1400 | KEYWORDS 16S ribosomal RNA. |
---|
1401 | SEGMENT 1 of 3 |
---|
1402 | SOURCE Acidiphilium rubrum (library: ATCC 35905) rRNA. |
---|
1403 | ORGANISM Acidiphilium rubrum |
---|
1404 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1405 | Alcaligenaceae. |
---|
1406 | REFERENCE 1 (bases 1 to 363) |
---|
1407 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1408 | Olsen,G.J. and Pace,N.R. |
---|
1409 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1410 | eubacteria |
---|
1411 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1412 | STANDARD full automatic |
---|
1413 | FEATURES Location/Qualifiers |
---|
1414 | rRNA 1..363 |
---|
1415 | /product="16S ribosomal RNA" |
---|
1416 | /gene="16S rRNA" |
---|
1417 | /partial |
---|
1418 | source 1..363 |
---|
1419 | /organism="Acidiphilium rubrum" |
---|
1420 | /sequenced_mol="rRNA" |
---|
1421 | /tissue_lib="ATCC 35905" |
---|
1422 | BASE COUNT 83 a 71 c 110 g 64 t 35 others |
---|
1423 | ORIGIN |
---|
1424 | 1 ggtagtacgc gtaggaatct atccnnnnnn nnnnnnnnnn nnnnggaaac tacggctaat |
---|
1425 | 61 accgcataat sctgagggcg aaagacgtaa gtcgtctggg gaggagcctg cgtctgatta |
---|
1426 | 121 ggtagttggt ggggtnaagg cctacnnagc cnncgatcag tagctggtct gagaggatga |
---|
1427 | 181 tcagccacat tgggactgag acacggccnn aactcctacg ggaggcagca gtggggaata |
---|
1428 | 241 ttggacaatg ggggcaaccc tnatccagca atgccgcgtg ggtgaagaag gtnttcggat |
---|
1429 | 301 tgtaaagccn nnttggcggg gacgatgatg acggtacccg cagaataagc tccggcnnac |
---|
1430 | 361 ttc |
---|
1431 | // |
---|
1432 | LOCUS ACDRRDJ02 347 bp ss-rRNA RNA 24-JUN-1993 |
---|
1433 | DEFINITION Acidiphilium rubrum 16S rRNA sequence. |
---|
1434 | ACCESSION M79378 |
---|
1435 | KEYWORDS 16S ribosomal RNA. |
---|
1436 | SEGMENT 2 of 3 |
---|
1437 | SOURCE Acidiphilium rubrum (library: ATCC 35905) rRNA. |
---|
1438 | ORGANISM Acidiphilium rubrum |
---|
1439 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1440 | Alcaligenaceae. |
---|
1441 | REFERENCE 1 (bases 1 to 347) |
---|
1442 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1443 | Olsen,G.J. and Pace,N.R. |
---|
1444 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1445 | eubacteria |
---|
1446 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1447 | STANDARD full automatic |
---|
1448 | FEATURES Location/Qualifiers |
---|
1449 | rRNA 1..347 |
---|
1450 | /product="16S ribosomal RNA" |
---|
1451 | /gene="16S rRNA" |
---|
1452 | /partial |
---|
1453 | source 1..347 |
---|
1454 | /organism="Acidiphilium rubrum" |
---|
1455 | /sequenced_mol="rRNA" |
---|
1456 | /tissue_lib="ATCC 35905" |
---|
1457 | BASE COUNT 83 a 67 c 114 g 78 t 5 others |
---|
1458 | ORIGIN |
---|
1459 | 1 tctgaatgac tgggcgtaaa gggncgtagg cgcttacata gttaggcgtg aaattcctgg |
---|
1460 | 61 gctcaacctg gggctgcgtc taatacatgt aggcttgagt gtgaaagagg gtcgtggaat |
---|
1461 | 121 ttccagtgta gaggtgaaat tcgtagatat tggaaagaac accggtggcg aaggcggcga |
---|
1462 | 181 cctngttcat tactgacgct gaggcgcnaa agcgtgggga gcaaacagga ttagataccc |
---|
1463 | 241 tngtagtcca cgctgtaaac gatgtgtgct ggatgttggg gtgcttagca cttcagtgtc |
---|
1464 | 301 gtagctaacg cggtaagcac accgcctngg gagtacggcc gcaaggt |
---|
1465 | // |
---|
1466 | LOCUS ACDRRDJ03 383 bp ss-rRNA RNA 24-JUN-1993 |
---|
1467 | DEFINITION Acidiphilium rubrum 16S rRNA sequence. |
---|
1468 | ACCESSION M79379 |
---|
1469 | KEYWORDS 16S ribosomal RNA. |
---|
1470 | SEGMENT 3 of 3 |
---|
1471 | SOURCE Acidiphilium rubrum (library: ATCC 35905) rRNA. |
---|
1472 | ORGANISM Acidiphilium rubrum |
---|
1473 | Prokaryotae; Gracilicutes; Scotobacteria; Aerobic rods and cocci; |
---|
1474 | Alcaligenaceae. |
---|
1475 | REFERENCE 1 (bases 1 to 383) |
---|
1476 | AUTHORS Lane,D.J., Harrison,A.P., Stahl,D.A., Pace,B., Giovannoni,S.J., |
---|
1477 | Olsen,G.J. and Pace,N.R. |
---|
1478 | TITLE Evolutionary relationships among sulfur- and iron-oxidizing |
---|
1479 | eubacteria |
---|
1480 | JOURNAL J. Bacteriol. 174, 269-278 (1992) |
---|
1481 | STANDARD full automatic |
---|
1482 | FEATURES Location/Qualifiers |
---|
1483 | rRNA 1..383 |
---|
1484 | /product="16S ribosomal RNA" |
---|
1485 | /gene="16S rRNA" |
---|
1486 | /partial |
---|
1487 | source 1..383 |
---|
1488 | /organism="Acidiphilium rubrum" |
---|
1489 | /sequenced_mol="rRNA" |
---|
1490 | /tissue_lib="ATCC 35905" |
---|
1491 | BASE COUNT 79 a 92 c 120 g 84 t 8 others |
---|
1492 | ORIGIN |
---|
1493 | 1 ttgacatgag agcgtgccag agatnnnttc cgcaggnnct ttgcacaggt gctgcatggc |
---|
1494 | 61 tgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg caacgagcgc aaccctcgcc |
---|
1495 | 121 tttagttgcc agcacgtttg ggtgggnact ctagaggrac tgccggtgac aagccggagg |
---|
1496 | 181 aaggtgggna tgacgtcaag tcctcatggc ccttatgtcc tgggctacac acgtgctaca |
---|
1497 | 241 atggcggtga cagtgggaag ccaagcagcg atgctgagct gatcctgaaa agccgtctca |
---|
1498 | 301 gttcggattg cactctgcaa ctcgggtgca tgaaggtgga atcgctagta atcgcggatc |
---|
1499 | 361 agcatgccgc ggtgaatacg ttc |
---|
1500 | // |
---|