|
Last change
on this file was
2254,
checked in by westram, 21 years ago
|
- many changes to run tasks in seperate directories
- removed deprecated stuff
|
-
Property svn:eol-style set to
native
-
Property svn:keywords set to
Author Date Id Revision
|
|
File size:
700 bytes
|
| Line | |
|---|
| 1 | item:Export sequences to foreign format (Readseq) ... |
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| 2 | itemmeta: R |
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| 3 | itemmethod:arb_readseq in1 -pipe -all -form=$FORMAT > $OUTPUTFILE |
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| 4 | itemhelp:readseq.help |
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| 5 | |
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| 6 | arg:FORMAT |
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| 7 | argtype:choice_menu |
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| 8 | argchoice:GenBank:genbank |
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| 9 | argchoice:IG/Stanford:ig |
|---|
| 10 | argchoice:NBRF:nbrf |
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| 11 | argchoice:EMBL:embl |
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| 12 | argchoice:GCG:gcg |
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| 13 | argchoice:DNA Strider:strider |
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| 14 | argchoice:Fitch:fitch |
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| 15 | argchoice:Pearson/Fasta:pearson |
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| 16 | argchoice:Zuker:zuker |
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| 17 | argchoice:Olsen:olsen |
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| 18 | argchoice:Phylip:phylip |
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| 19 | argchoice:Plain text:raw |
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| 20 | argchoice:ASN.1:asn |
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| 21 | argchoice:PIR:pir |
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| 22 | argchoice:MSF:msf |
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| 23 | argchoice:PAUP/NEXUS:paup |
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| 24 | argchoice:Pretty:pretty -nametop -nameleft=3 -numright -nameright -numtop |
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| 25 | |
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| 26 | arg:OUTPUTFILE |
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| 27 | argtype:text |
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| 28 | arglabel:Save as? |
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| 29 | |
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| 30 | in:in1 |
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| 31 | informat:genbank |
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