1 | // Copyright (c) 2004 - 2005 Kai Bader <baderk@in.tum.de> |
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2 | // |
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3 | // THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR |
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4 | // IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, |
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5 | // FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE |
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6 | // AUTHORS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN |
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7 | // AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN |
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8 | // CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
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9 | |
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10 | // CVS REVISION TAG -- $Revision: 5725 $ |
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11 | |
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12 | |
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13 | #include "import_dialog.hxx" |
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14 | #include "selection_dialog.hxx" |
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15 | #include "entry_sel_dialog.hxx" |
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16 | #include "arb_interface.hxx" |
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17 | |
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18 | |
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19 | // CALLBACK WRAPPER FUNCTIONS (STATIC) |
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20 | void staticGetFilenameCallback(Widget, XtPointer, XtPointer); |
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21 | void staticFileDialogCloseCallback(Widget parent, XtPointer, XtPointer); |
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22 | void staticFileDialogCallback(Widget parent, XtPointer, XtPointer call_data); |
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23 | void staticARBdestinationCallback(Widget, XtPointer, XtPointer); |
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24 | void staticSpeciesChangedCallback(Widget, XtPointer, XtPointer); |
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25 | void staticExperimentChangedCallback(Widget, XtPointer, XtPointer); |
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26 | void staticProteomeChangedCallback(Widget, XtPointer, XtPointer); |
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27 | void staticClearEntriesButtonCallback(Widget, XtPointer, XtPointer); |
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28 | void staticOpenFileButtonCallback(Widget, XtPointer, XtPointer); |
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29 | void staticColumnDownCallback(Widget, XtPointer, XtPointer); |
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30 | void staticColumnUpCallback(Widget, XtPointer, XtPointer); |
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31 | void staticHeaderChangedCallback(Widget, XtPointer, XtPointer); |
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32 | void staticResetHeaderButtonCallback(Widget, XtPointer, XtPointer); |
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33 | void staticImportDataCallback(Widget, XtPointer, XtPointer); |
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34 | void staticChangedDatatypeCallback(Widget, XtPointer, XtPointer); |
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35 | void staticSampleListEntryCallback(Widget, XtPointer, XtPointer); |
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36 | void staticExternHeaderSelectionCallback(Widget, XtPointer, XtPointer); |
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37 | void staticExternHeaderChangedCallback(Widget, XtPointer, XtPointer); |
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38 | |
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39 | |
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40 | /**************************************************************************** |
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41 | * MAIN DIALOG - CONSTRUCTOR |
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42 | ****************************************************************************/ |
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43 | importDialog::importDialog(MDialog *d) |
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44 | : MDialog(d) |
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45 | { |
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46 | // PRESET CLASS VARIABLES |
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47 | m_species= get_species_AWAR(); |
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48 | m_experiment= get_experiment_AWAR(); |
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49 | m_proteome= get_proteom_AWAR(); |
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50 | // |
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51 | m_table= NULL; |
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52 | m_xslt= NULL; |
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53 | |
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54 | m_hasFileDialog= false; |
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55 | m_hasSelectionDialog= false; |
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56 | m_hasTableData = false; |
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57 | |
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58 | // CREATE TYPE STRINGS |
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59 | m_str_int= CreateDlgString("INT"); |
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60 | m_str_float= CreateDlgString("FLOAT"); |
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61 | m_str_string= CreateDlgString("STRING"); |
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62 | |
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63 | // SHOW DIALOG |
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64 | createShell(""); |
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65 | |
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66 | // CALL CREATE WINDOW FUNCTION |
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67 | createWindow(); |
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68 | |
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69 | // SET WINDOW WIDTH |
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70 | XtVaSetValues(m_shell, |
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71 | XmNwidth, 600, |
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72 | NULL); |
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73 | |
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74 | // REALIZE WINDOW |
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75 | realizeShell(); |
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76 | |
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77 | // SET WINDOW LABEL |
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78 | setDialogTitle("PGT - Proteome Data Importer"); |
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79 | } |
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80 | |
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81 | |
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82 | /**************************************************************************** |
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83 | * MAIN DIALOG - DESTRUCTOR |
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84 | ****************************************************************************/ |
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85 | importDialog::~importDialog() |
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86 | { |
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87 | // FREE ENTRIES |
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88 | if(m_species) free(m_species); |
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89 | if(m_experiment) free(m_experiment); |
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90 | if(m_proteome) free(m_proteome); |
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91 | if(m_table) free(m_table); |
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92 | if(m_xslt) free(m_xslt); |
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93 | } |
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94 | |
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95 | |
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96 | /**************************************************************************** |
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97 | * MAIN DIALOG - CREATE WINDOW |
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98 | ****************************************************************************/ |
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99 | void importDialog::createWindow() |
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100 | { |
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101 | // CREATE TOP LEVEL WIDGET |
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102 | m_top= XtVaCreateManagedWidget("top", |
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103 | xmRowColumnWidgetClass, m_shell, |
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104 | XmNorientation, XmVERTICAL, |
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105 | XmNmarginHeight, 0, |
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106 | XmNmarginWidth, 0, |
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107 | NULL); |
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108 | |
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109 | // CREATE SELECTION AREA |
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110 | createSelectionArea(); |
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111 | |
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112 | // CREATE HORIZONTAL SEPARATOR WIDGET |
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113 | XtVaCreateManagedWidget("separator", |
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114 | xmSeparatorWidgetClass, m_top, |
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115 | XmNorientation, XmHORIZONTAL, |
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116 | NULL); |
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117 | |
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118 | // CREATE IMPORT AREA |
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119 | createImportArea(); |
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120 | |
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121 | // FILL THE IMPORT TYPE COMBOBOX |
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122 | fillImportTypeCombobox(); |
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123 | |
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124 | // UPDATE ARB ENTRY FIELD |
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125 | updateARBText(); |
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126 | } |
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127 | |
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128 | |
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129 | /**************************************************************************** |
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130 | * MAIN DIALOG - CREATE WINDOW |
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131 | ****************************************************************************/ |
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132 | void importDialog::createSelectionArea() |
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133 | { |
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134 | // CREATE STRINGS |
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135 | XmString str_01= CreateDlgString("..."); |
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136 | XmString str_02= CreateDlgString("Source File:"); |
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137 | XmString str_03= CreateDlgString("ARB Destination:"); |
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138 | XmString str_04= CreateDlgString("Import Filter:"); |
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139 | XmString str_05= CreateDlgString("Clear Entries"); |
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140 | XmString str_06= CreateDlgString("Open File"); |
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141 | |
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142 | // CREATE LOCAL MANAGER WIDGET |
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143 | Widget manager= XtVaCreateManagedWidget("mainarea", |
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144 | xmFormWidgetClass, m_top, |
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145 | // XmNmarginHeight, 0, |
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146 | // XmNmarginWidth, 0, |
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147 | NULL); |
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148 | |
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149 | // CREATE FILENAME SELECTION BUTTON |
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150 | Widget fileButtonWidget= XtVaCreateManagedWidget("fileselectbutton", |
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151 | xmPushButtonWidgetClass, manager, |
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152 | XmNlabelString, str_01, |
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153 | XmNwidth, 40, |
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154 | XmNheight, 30, |
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155 | XmNtopAttachment, XmATTACH_FORM, |
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156 | XmNrightAttachment, XmATTACH_FORM, |
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157 | NULL); |
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158 | XtAddCallback(fileButtonWidget, XmNactivateCallback, staticGetFilenameCallback, this); |
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159 | |
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160 | // CREATE DATASET SELECTION BUTTON |
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161 | Widget datasetButtonWidget= XtVaCreateManagedWidget("datasetbuttonwidget", |
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162 | xmPushButtonWidgetClass, manager, |
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163 | XmNlabelString, str_01, |
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164 | XmNwidth, 40, |
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165 | XmNheight, 30, |
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166 | XmNtopAttachment, XmATTACH_WIDGET, |
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167 | XmNtopWidget, fileButtonWidget, |
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168 | XmNrightAttachment, XmATTACH_FORM, |
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169 | NULL); |
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170 | XtAddCallback(datasetButtonWidget, XmNactivateCallback, staticARBdestinationCallback, this); |
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171 | |
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172 | // CREATE FIRST ROW LABEL |
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173 | Widget upperLabel= XtVaCreateManagedWidget("label", |
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174 | xmLabelWidgetClass, manager, |
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175 | XmNlabelString, str_02, |
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176 | XmNwidth, 110, |
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177 | XmNheight, 30, |
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178 | XmNalignment, XmALIGNMENT_BEGINNING, |
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179 | XmNtopAttachment, XmATTACH_FORM, |
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180 | XmNleftAttachment, XmATTACH_FORM, |
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181 | NULL); |
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182 | |
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183 | // CREATE SECOND ROW LABEL |
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184 | Widget lowerLabel= XtVaCreateManagedWidget("label", |
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185 | xmLabelWidgetClass, manager, |
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186 | XmNlabelString, str_03, |
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187 | XmNwidth, 110, |
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188 | XmNheight, 30, |
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189 | XmNalignment, XmALIGNMENT_BEGINNING, |
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190 | XmNtopAttachment, XmATTACH_WIDGET, |
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191 | XmNtopWidget, upperLabel, |
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192 | XmNleftAttachment, XmATTACH_FORM, |
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193 | NULL); |
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194 | |
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195 | // CREATE THIRD ROW LABEL |
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196 | Widget typeLabel= XtVaCreateManagedWidget("label", |
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197 | xmLabelWidgetClass, manager, |
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198 | XmNlabelString, str_04, |
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199 | XmNwidth, 110, |
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200 | XmNheight, 30, |
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201 | XmNalignment, XmALIGNMENT_BEGINNING, |
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202 | XmNtopAttachment, XmATTACH_WIDGET, |
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203 | XmNtopWidget, lowerLabel, |
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204 | XmNleftAttachment, XmATTACH_FORM, |
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205 | NULL); |
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206 | |
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207 | // CREATE FILENAME TEXT FIELD |
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208 | m_filenameWidget= XtVaCreateManagedWidget("filenamewidget", |
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209 | xmTextWidgetClass, manager, |
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210 | XmNheight, 30, |
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211 | XmNtopAttachment, XmATTACH_FORM, |
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212 | XmNrightAttachment, XmATTACH_WIDGET, |
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213 | XmNrightWidget, fileButtonWidget, |
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214 | XmNleftAttachment, XmATTACH_WIDGET, |
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215 | XmNleftWidget, upperLabel, |
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216 | NULL); |
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217 | |
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218 | // CREATE ARB DATASET TEXT FIELD |
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219 | m_datasetWidget= XtVaCreateManagedWidget("arbdatasetwidget", |
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220 | xmTextWidgetClass, manager, |
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221 | XmNeditable, false, |
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222 | XmNheight, 30, |
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223 | XmNtopAttachment, XmATTACH_WIDGET, |
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224 | XmNtopWidget, m_filenameWidget, |
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225 | XmNrightAttachment, XmATTACH_WIDGET, |
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226 | XmNrightWidget, datasetButtonWidget, |
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227 | XmNleftAttachment, XmATTACH_WIDGET, |
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228 | XmNleftWidget, lowerLabel, |
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229 | NULL); |
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230 | |
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231 | // CREATE COMBOBOX FOR FILE TYPE SELECTION |
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232 | m_fileTypeWidget= XtVaCreateManagedWidget("filetypecombobox", |
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233 | xmComboBoxWidgetClass, manager, |
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234 | XmNcomboBoxType, XmDROP_DOWN_COMBO_BOX, |
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235 | XmNmarginWidth, 1, |
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236 | XmNmarginHeight, 1, |
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237 | // XmNheight, 30, |
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238 | XmNtopAttachment, XmATTACH_WIDGET, |
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239 | XmNtopWidget, m_datasetWidget, |
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240 | XmNleftAttachment, XmATTACH_WIDGET, |
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241 | XmNleftWidget, typeLabel, |
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242 | NULL); |
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243 | |
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244 | // CREATE RESET BUTTON |
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245 | Widget resetButtonWidget= XtVaCreateManagedWidget("resetbutton", |
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246 | xmPushButtonWidgetClass, manager, |
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247 | XmNlabelString, str_05, |
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248 | XmNtopAttachment, XmATTACH_WIDGET, |
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249 | XmNtopWidget, datasetButtonWidget, |
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250 | // XmNbottomAttachment, XmATTACH_FORM, |
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251 | XmNrightAttachment, XmATTACH_FORM, |
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252 | // XmNbottomAttachment, XmATTACH_FORM, |
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253 | // XmNrightAttachment, XmATTACH_WIDGET, |
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254 | // XmNrightWidget, openButtonWidget, |
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255 | XmNwidth, 100, |
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256 | XmNheight, 30, |
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257 | NULL); |
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258 | XtAddCallback(resetButtonWidget, XmNactivateCallback, staticClearEntriesButtonCallback, this); |
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259 | |
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260 | // CREATE IMPORT BUTTON |
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261 | Widget openButtonWidget= XtVaCreateManagedWidget("openbutton", |
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262 | xmPushButtonWidgetClass, manager, |
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263 | XmNlabelString, str_06, |
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264 | XmNtopAttachment, XmATTACH_WIDGET, |
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265 | XmNtopWidget, resetButtonWidget, |
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266 | XmNbottomAttachment, XmATTACH_FORM, |
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267 | XmNrightAttachment, XmATTACH_FORM, |
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268 | // XmNbottomAttachment, XmATTACH_FORM, |
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269 | // XmNrightAttachment, XmATTACH_WIDGET, |
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270 | // XmNrightWidget, openButtonWidget, |
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271 | XmNwidth, 100, |
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272 | XmNheight, 30, |
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273 | NULL); |
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274 | XtAddCallback(openButtonWidget, XmNactivateCallback, staticOpenFileButtonCallback, this); |
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275 | } |
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276 | |
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277 | |
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278 | /**************************************************************************** |
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279 | * MAIN DIALOG - CREATE IMPORT AREA |
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280 | ****************************************************************************/ |
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281 | void importDialog::createImportArea() |
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282 | { |
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283 | // CREATE STRINGS |
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284 | XmString str_01= CreateDlgString("Select Data Column:"); |
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285 | XmString str_02= CreateDlgString("New ARB Container Type:"); |
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286 | XmString str_03= CreateDlgString("Original Column Header:"); |
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287 | XmString str_04= CreateDlgString("New ARB Container Name:"); |
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288 | XmString str_05= CreateDlgString("ARB entry IDs"); |
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289 | XmString str_06= CreateDlgString("Import -> ARB"); |
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290 | XmString str_07= CreateDlgString("New Proteome Content:"); |
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291 | XmString str_08= CreateDlgString("Reset Names"); |
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292 | |
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293 | // CREATE LOCAL MANAGER WIDGET |
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294 | Widget manager= XtVaCreateManagedWidget("importarea", |
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295 | xmFormWidgetClass, m_top, |
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296 | // XmNmarginHeight, 0, |
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297 | // XmNmarginWidth, 0, |
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298 | NULL); |
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299 | |
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300 | // CREATE LABEL |
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301 | Widget typeLabel= XtVaCreateManagedWidget("label", |
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302 | xmLabelWidgetClass, manager, |
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303 | XmNlabelString, str_01, |
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304 | XmNalignment, XmALIGNMENT_BEGINNING, |
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305 | XmNleftAttachment, XmATTACH_FORM, |
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306 | XmNtopAttachment, XmATTACH_FORM, |
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307 | XmNwidth, 150, |
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308 | XmNheight, 30, |
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309 | NULL); |
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310 | |
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311 | // CREATE LABEL |
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312 | Widget columnTypeLabel= XtVaCreateManagedWidget("label", |
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313 | xmLabelWidgetClass, manager, |
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314 | XmNlabelString, str_02, |
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315 | XmNwidth, 150, |
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316 | XmNheight, 30, |
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317 | XmNalignment, XmALIGNMENT_BEGINNING, |
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318 | XmNleftAttachment, XmATTACH_FORM, |
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319 | XmNtopAttachment, XmATTACH_WIDGET, |
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320 | XmNtopWidget, typeLabel, |
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321 | NULL); |
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322 | |
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323 | // CREATE LABEL |
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324 | Widget columnLabel= XtVaCreateManagedWidget("label", |
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325 | xmLabelWidgetClass, manager, |
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326 | XmNlabelString, str_03, |
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327 | XmNwidth, 150, |
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328 | XmNheight, 30, |
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329 | XmNalignment, XmALIGNMENT_BEGINNING, |
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330 | XmNleftAttachment, XmATTACH_FORM, |
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331 | XmNtopAttachment, XmATTACH_WIDGET, |
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332 | XmNtopWidget, columnTypeLabel, |
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333 | NULL); |
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334 | |
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335 | // CREATE LABEL |
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336 | Widget containerLabel= XtVaCreateManagedWidget("label", |
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337 | xmLabelWidgetClass, manager, |
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338 | XmNlabelString, str_04, |
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339 | XmNwidth, 150, |
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340 | XmNheight, 30, |
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341 | XmNalignment, XmALIGNMENT_BEGINNING, |
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342 | XmNleftAttachment, XmATTACH_FORM, |
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343 | XmNtopAttachment, XmATTACH_WIDGET, |
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344 | XmNtopWidget, columnLabel, |
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345 | NULL); |
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346 | |
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347 | // CREATE LEFT ARROW WIDGET |
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348 | Widget selector_l= XtVaCreateManagedWidget("arrowleft", |
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349 | xmArrowButtonGadgetClass, manager, |
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350 | XmNarrowDirection, XmARROW_LEFT, |
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351 | XmNtopAttachment, XmATTACH_FORM, |
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352 | XmNleftAttachment, XmATTACH_WIDGET, |
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353 | XmNleftWidget, typeLabel, |
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354 | XmNwidth, 24, |
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355 | XmNheight, 30, |
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356 | NULL); |
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357 | XtAddCallback(selector_l, XmNactivateCallback, staticColumnDownCallback, this); |
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358 | |
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359 | // CREATE RIGHT ARROW WIDGET |
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360 | Widget selector_r= XtVaCreateManagedWidget("arrowright", |
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361 | xmArrowButtonGadgetClass, manager, |
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362 | XmNarrowDirection, XmARROW_RIGHT, |
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363 | XmNtopAttachment, XmATTACH_FORM, |
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364 | XmNrightAttachment, XmATTACH_FORM, |
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365 | XmNwidth, 24, |
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366 | XmNheight, 30, |
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367 | NULL); |
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368 | XtAddCallback(selector_r, XmNactivateCallback, staticColumnUpCallback, this); |
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369 | |
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370 | // CREATE COLUMN SELECTOR TEXT FIELD |
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371 | m_selectorText= XtVaCreateManagedWidget("selectortext", |
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372 | xmTextWidgetClass, manager, |
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373 | XmNeditable, false, |
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374 | XmNtopAttachment, XmATTACH_FORM, |
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375 | XmNleftAttachment, XmATTACH_WIDGET, |
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376 | XmNleftWidget, selector_l, |
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377 | XmNrightAttachment, XmATTACH_WIDGET, |
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378 | XmNrightWidget, selector_r, |
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379 | XmNheight, 30, |
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380 | NULL); |
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381 | |
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382 | // CREATE COLUMN TYPE COMBOBOX WIDGET |
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383 | m_fieldTypeWidget= XtVaCreateManagedWidget("fieldtypecombobox", |
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384 | xmComboBoxWidgetClass, manager, |
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385 | XmNcomboBoxType, XmDROP_DOWN_COMBO_BOX, |
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386 | XmNmarginWidth, 1, |
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387 | XmNmarginHeight, 1, |
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388 | XmNleftAttachment, XmATTACH_WIDGET, |
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389 | XmNleftWidget, columnTypeLabel, |
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390 | XmNtopAttachment, XmATTACH_WIDGET, |
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391 | XmNtopWidget, m_selectorText, |
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392 | NULL); |
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393 | XtAddCallback(m_fieldTypeWidget, XmNselectionCallback, staticChangedDatatypeCallback, this); |
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394 | |
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395 | // FILL THE COLUMN TYPE COMBOBOX |
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396 | fillARBTypeCombobox(); |
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397 | |
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398 | // CREATE COLUMN HEADER TEXT FIELD |
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399 | m_columnHeaderWidget= XtVaCreateManagedWidget("columnHeaderText", |
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400 | xmTextWidgetClass, manager, |
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401 | XmNeditable, false, |
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402 | XmNheight, 30, |
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403 | XmNleftAttachment, XmATTACH_WIDGET, |
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404 | XmNleftWidget, columnLabel, |
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405 | XmNrightAttachment, XmATTACH_FORM, |
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406 | XmNtopAttachment, XmATTACH_WIDGET, |
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407 | XmNtopWidget, m_fieldTypeWidget, |
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408 | NULL); |
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409 | |
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410 | // CREATE COLUMN HEADER TEXT FIELD |
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411 | m_containerHeaderWidget= XtVaCreateManagedWidget("containerHeaderText", |
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412 | xmTextWidgetClass, manager, |
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413 | XmNheight, 30, |
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414 | XmNleftAttachment, XmATTACH_WIDGET, |
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415 | XmNleftWidget, containerLabel, |
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416 | XmNrightAttachment, XmATTACH_FORM, |
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417 | XmNtopAttachment, XmATTACH_WIDGET, |
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418 | XmNtopWidget, m_columnHeaderWidget, |
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419 | NULL); |
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420 | XtAddCallback(m_containerHeaderWidget, XmNactivateCallback, staticHeaderChangedCallback, this); |
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421 | |
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422 | // CREATE RESET NAMES BUTTON |
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423 | Widget namesButtonWidget= XtVaCreateManagedWidget("namesbutton", |
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424 | xmPushButtonWidgetClass, manager, |
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425 | XmNlabelString, str_08, |
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426 | XmNtopAttachment, XmATTACH_WIDGET, |
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427 | XmNtopWidget, m_containerHeaderWidget, |
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428 | XmNrightAttachment, XmATTACH_FORM, |
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429 | XmNwidth, 100, |
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430 | XmNheight, 30, |
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431 | NULL); |
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432 | XtAddCallback(namesButtonWidget, XmNactivateCallback, staticResetHeaderButtonCallback, this); |
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433 | |
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434 | // CREATE ARB NAMES BUTTON |
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435 | Widget ARBnamesButtonWidget= XtVaCreateManagedWidget("ARBnamesButton", |
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436 | xmPushButtonWidgetClass, manager, |
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437 | XmNlabelString, str_05, |
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438 | XmNtopAttachment, XmATTACH_WIDGET, |
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439 | XmNtopWidget, m_containerHeaderWidget, |
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440 | XmNrightAttachment, XmATTACH_WIDGET, |
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441 | XmNrightWidget, namesButtonWidget, |
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442 | XmNwidth, 100, |
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443 | XmNheight, 30, |
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444 | NULL); |
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445 | XtAddCallback(ARBnamesButtonWidget, XmNactivateCallback, staticExternHeaderSelectionCallback, this); |
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446 | |
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447 | // CREATE IMPORT BUTTON |
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448 | Widget importButtonWidget= XtVaCreateManagedWidget("importbutton", |
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449 | xmPushButtonWidgetClass, manager, |
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450 | XmNlabelString, str_06, |
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451 | XmNtopAttachment, XmATTACH_WIDGET, |
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452 | XmNtopWidget, namesButtonWidget, |
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453 | XmNrightAttachment, XmATTACH_FORM, |
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454 | XmNwidth, 100, |
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455 | XmNheight, 30, |
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456 | NULL); |
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457 | XtAddCallback(importButtonWidget, XmNactivateCallback, staticImportDataCallback, this); |
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458 | |
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459 | // CREATE LABEL |
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460 | XtVaCreateManagedWidget("label", |
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461 | xmLabelWidgetClass, m_top, |
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462 | XmNlabelString, str_07, |
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463 | // XmNwidth, 160, |
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464 | // XmNheight, 30, |
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465 | NULL); |
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466 | |
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467 | // SAMPLE ARB CONTAINER ENTRIES LIST |
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468 | m_sampleList= XmCreateScrolledList(m_top, const_cast<char*>("sampleList"), NULL, 0); |
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469 | XtVaSetValues(m_sampleList, |
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470 | XmNmarginWidth, 1, |
---|
471 | XmNmarginHeight, 1, |
---|
472 | // XmNallowResize, true, |
---|
473 | XmNvisibleItemCount, 10, |
---|
474 | // XmNselectionPolicy, XmSINGLE_SELECT, |
---|
475 | NULL); |
---|
476 | XtManageChild(m_sampleList); |
---|
477 | XtAddCallback(m_sampleList, XmNbrowseSelectionCallback, staticSampleListEntryCallback, this); |
---|
478 | |
---|
479 | // // SAMPLE SCALE (FOR SELECTING THE SAMPLE ENTRY |
---|
480 | // m_sampleScale= XtVaCreateManagedWidget("sampleScale", |
---|
481 | // xmScaleWidgetClass, m_top, |
---|
482 | // XmNtitleString, CreateDlgString("Entry"), |
---|
483 | // XmNorientation, XmHORIZONTAL, |
---|
484 | // XmNmaximum, 10, |
---|
485 | // XmNdecimalPoints, 0, |
---|
486 | // XmNshowValue, True, |
---|
487 | // // XmNwidth, 200, |
---|
488 | // // XmNheight, 100, |
---|
489 | // NULL); |
---|
490 | } |
---|
491 | |
---|
492 | |
---|
493 | /**************************************************************************** |
---|
494 | * MAIN DIALOG - SET SPECIES NAME |
---|
495 | ****************************************************************************/ |
---|
496 | void importDialog::setSpecies(char *species) |
---|
497 | { |
---|
498 | m_species= (char *)malloc((strlen(species) +1)*sizeof(char)); |
---|
499 | strcpy(m_species, species); |
---|
500 | |
---|
501 | // set_species_AWAR(m_species); |
---|
502 | } |
---|
503 | |
---|
504 | |
---|
505 | /**************************************************************************** |
---|
506 | * MAIN DIALOG - SET EXPERIMENT NAME |
---|
507 | ****************************************************************************/ |
---|
508 | void importDialog::setExperiment(char *experiment) |
---|
509 | { |
---|
510 | m_experiment= (char *)malloc((strlen(experiment) +1)*sizeof(char)); |
---|
511 | strcpy(m_experiment, experiment); |
---|
512 | |
---|
513 | // set_experiment_AWAR(m_experiment); |
---|
514 | } |
---|
515 | |
---|
516 | |
---|
517 | /**************************************************************************** |
---|
518 | * MAIN DIALOG - SET PROTEOME NAME |
---|
519 | ****************************************************************************/ |
---|
520 | void importDialog::setProteome(char *proteome) |
---|
521 | { |
---|
522 | m_proteome= (char *)malloc((strlen(proteome) +1)*sizeof(char)); |
---|
523 | strcpy(m_proteome, proteome); |
---|
524 | |
---|
525 | // set_proteom_AWAR(m_proteome); |
---|
526 | } |
---|
527 | |
---|
528 | |
---|
529 | /**************************************************************************** |
---|
530 | * MAIN DIALOG - GET FILENAME CALLBACK |
---|
531 | ****************************************************************************/ |
---|
532 | void importDialog::getFilenameCallback(Widget, XtPointer) |
---|
533 | { |
---|
534 | if (!m_hasFileDialog) |
---|
535 | { |
---|
536 | m_fileDialog= XmCreateFileSelectionDialog(m_shell, const_cast<char*>("importDialog"), NULL, 0); |
---|
537 | XtAddCallback(m_fileDialog, XmNokCallback, staticFileDialogCallback, this); |
---|
538 | XtAddCallback(m_fileDialog, XmNcancelCallback, staticFileDialogCloseCallback, this); |
---|
539 | XtAddCallback(m_fileDialog, XmNnoMatchCallback, staticFileDialogCloseCallback, this); |
---|
540 | XtSetSensitive(XmFileSelectionBoxGetChild(m_fileDialog, XmDIALOG_HELP_BUTTON), False); |
---|
541 | |
---|
542 | XmString str_open= CreateDlgString("Open proteome data file..."); |
---|
543 | XtVaSetValues(m_fileDialog, XmNdialogTitle, str_open, NULL); |
---|
544 | |
---|
545 | m_hasFileDialog= true; |
---|
546 | } |
---|
547 | |
---|
548 | XtManageChild(m_fileDialog); |
---|
549 | XtPopup(XtParent(m_fileDialog), XtGrabNone); |
---|
550 | } |
---|
551 | |
---|
552 | |
---|
553 | /**************************************************************************** |
---|
554 | * MAIN DIALOG - CET FILENAME CALLBACK |
---|
555 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
556 | ****************************************************************************/ |
---|
557 | void staticGetFilenameCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
558 | { |
---|
559 | // GET POINTER OF THE ORIGINAL CALLER |
---|
560 | importDialog *iD= (importDialog *)clientData; |
---|
561 | |
---|
562 | // CALL CLASS MEMBER FUNCTION |
---|
563 | iD->getFilenameCallback(widget, callData); |
---|
564 | } |
---|
565 | |
---|
566 | |
---|
567 | /**************************************************************************** |
---|
568 | * CALLBACK - IMPORT FILE DIALOG VALUE |
---|
569 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
570 | ****************************************************************************/ |
---|
571 | void staticFileDialogCloseCallback(Widget parent, XtPointer, XtPointer) |
---|
572 | { |
---|
573 | // CLOSE FILE OPEN DIALOG |
---|
574 | XtUnmanageChild(parent); |
---|
575 | } |
---|
576 | |
---|
577 | |
---|
578 | /**************************************************************************** |
---|
579 | * CALLBACK - IMPORT FILE DIALOG VALUE |
---|
580 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
581 | ****************************************************************************/ |
---|
582 | void staticFileDialogCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
583 | { |
---|
584 | // GET POINTER OF THE ORIGINAL CALLER |
---|
585 | importDialog *iD= (importDialog *)clientData; |
---|
586 | |
---|
587 | // CALL CLASS MEMBER FUNCTION |
---|
588 | iD->fileDialogCallback(widget, callData); |
---|
589 | } |
---|
590 | |
---|
591 | |
---|
592 | /**************************************************************************** |
---|
593 | * CALLBACK - IMPORT FILE DIALOG VALUE |
---|
594 | ****************************************************************************/ |
---|
595 | void importDialog::fileDialogCallback(Widget widget, XtPointer callData) |
---|
596 | { |
---|
597 | // FETCH SELECTED FILENAME |
---|
598 | XmFileSelectionBoxCallbackStruct *cbs; |
---|
599 | cbs= (XmFileSelectionBoxCallbackStruct *)callData; |
---|
600 | |
---|
601 | // CONVERT XMSTRING TO CHAR* |
---|
602 | char *str; |
---|
603 | XmStringGetLtoR(cbs->value, XmFONTLIST_DEFAULT_TAG, &str); |
---|
604 | |
---|
605 | // CLOSE FILE OPEN DIALOG |
---|
606 | XtUnmanageChild(widget); |
---|
607 | |
---|
608 | // WRITE STRING TO TEXT FIELD |
---|
609 | XtVaSetValues(m_filenameWidget, XmNvalue, str, NULL); |
---|
610 | } |
---|
611 | |
---|
612 | |
---|
613 | /**************************************************************************** |
---|
614 | * CALLBACK - SELECT ARB DESTINATION |
---|
615 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
616 | ****************************************************************************/ |
---|
617 | void staticARBdestinationCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
618 | { |
---|
619 | // GET POINTER OF THE ORIGINAL CALLER |
---|
620 | importDialog *iD= (importDialog *)clientData; |
---|
621 | |
---|
622 | // CALL CLASS MEMBER FUNCTION |
---|
623 | iD->ARBdestinationCallback(widget, callData); |
---|
624 | } |
---|
625 | |
---|
626 | |
---|
627 | /**************************************************************************** |
---|
628 | * CALLBACK - SELECT ARB DESTINATION |
---|
629 | ****************************************************************************/ |
---|
630 | void importDialog::ARBdestinationCallback(Widget, XtPointer) |
---|
631 | { |
---|
632 | selectionDialog *sD= new selectionDialog(this, SELECTION_DIALOG_WRITE); |
---|
633 | |
---|
634 | // SET SPECIES CALLBACK |
---|
635 | sD->setSpeciesCallback(staticSpeciesChangedCallback); |
---|
636 | |
---|
637 | // SET EXPERIMENT CALLBACK |
---|
638 | sD->setExperimentCallback(staticExperimentChangedCallback); |
---|
639 | |
---|
640 | // SET PROTEOME CALLBACK |
---|
641 | sD->setProteomeCallback(staticProteomeChangedCallback); |
---|
642 | |
---|
643 | |
---|
644 | // new selectionDialog(m_shell, &m_species, &m_experiment, |
---|
645 | // &m_proteome, staticDataChangedCallback); |
---|
646 | } |
---|
647 | |
---|
648 | |
---|
649 | /**************************************************************************** |
---|
650 | * CALLBACK - DATA CHANGED CALLBACK |
---|
651 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
652 | ****************************************************************************/ |
---|
653 | void staticSpeciesChangedCallback(Widget, XtPointer clientData, XtPointer callData) |
---|
654 | { |
---|
655 | // GET POINTER OF THE ORIGINAL CALLER |
---|
656 | importDialog *iD= (importDialog *)clientData; |
---|
657 | |
---|
658 | // GET SPECIES NAME FROM CALLDATA |
---|
659 | char *name= *((char **)callData); |
---|
660 | |
---|
661 | // SET NEW NAMES |
---|
662 | iD->setSpecies(name); |
---|
663 | iD->setExperiment(const_cast<char*>("")); |
---|
664 | iD->setProteome(const_cast<char*>("")); |
---|
665 | |
---|
666 | // UPDATE OUTPUT |
---|
667 | iD->updateARBText(); |
---|
668 | } |
---|
669 | |
---|
670 | |
---|
671 | /**************************************************************************** |
---|
672 | * CALLBACK - DATA CHANGED CALLBACK |
---|
673 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
674 | ****************************************************************************/ |
---|
675 | void staticExperimentChangedCallback(Widget, XtPointer clientData, XtPointer callData) |
---|
676 | { |
---|
677 | // GET POINTER OF THE ORIGINAL CALLER |
---|
678 | importDialog *iD= (importDialog *)clientData; |
---|
679 | |
---|
680 | // GET EXPERIMENT NAME FROM CALLDATA |
---|
681 | char *name= *((char **)callData); |
---|
682 | |
---|
683 | // SET NEW NAMES |
---|
684 | iD->setExperiment(name); |
---|
685 | iD->setProteome(const_cast<char*>("")); |
---|
686 | |
---|
687 | // UPDATE OUTPUT |
---|
688 | iD->updateARBText(); |
---|
689 | } |
---|
690 | |
---|
691 | |
---|
692 | /**************************************************************************** |
---|
693 | * CALLBACK - DATA CHANGED CALLBACK |
---|
694 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
695 | ****************************************************************************/ |
---|
696 | void staticProteomeChangedCallback(Widget, XtPointer clientData, XtPointer callData) |
---|
697 | { |
---|
698 | // GET POINTER OF THE ORIGINAL CALLER |
---|
699 | importDialog *iD= (importDialog *)clientData; |
---|
700 | |
---|
701 | // GET PROTEOME NAME FROM CALLDATA |
---|
702 | char *name= *((char **)callData); |
---|
703 | |
---|
704 | // SET NEW NAMES |
---|
705 | iD->setProteome(name); |
---|
706 | |
---|
707 | // UPDATE OUTPUT |
---|
708 | iD->updateARBText(); |
---|
709 | } |
---|
710 | |
---|
711 | |
---|
712 | /**************************************************************************** |
---|
713 | * IMPORT DIALOG - UPDATE THE ARB TEXT FIELD ENTRY |
---|
714 | * (SHOW SELECTED SPECIES/EXPERIMENT/PROTEOME) |
---|
715 | ****************************************************************************/ |
---|
716 | void importDialog::updateARBText() |
---|
717 | { |
---|
718 | // CREATE BUFFER |
---|
719 | char *buf= (char *)malloc(1024 * sizeof(char)); |
---|
720 | char *sp= const_cast<char*>("no species"); |
---|
721 | char *exp= const_cast<char*>("no experiment"); |
---|
722 | char *prot= const_cast<char*>("no proteome"); |
---|
723 | |
---|
724 | // USE REAL STRINGS IF AVAILABLE |
---|
725 | if(m_species && (strlen(m_species))) sp= m_species; |
---|
726 | if(m_experiment && (strlen(m_experiment))) exp= m_experiment; |
---|
727 | if(m_proteome && (strlen(m_proteome))) prot= m_proteome; |
---|
728 | |
---|
729 | // FILL BUFFER STRING |
---|
730 | sprintf(buf, "[%s] -> [%s] -> [%s]", sp, exp, prot); |
---|
731 | |
---|
732 | // COPY STRING TO TEXT FIELD |
---|
733 | XtVaSetValues(m_datasetWidget, XmNvalue, buf, NULL); |
---|
734 | |
---|
735 | // FREE BUFFER |
---|
736 | free(buf); |
---|
737 | } |
---|
738 | |
---|
739 | |
---|
740 | /**************************************************************************** |
---|
741 | * IMPORT DIALOG - FILL THE IMPORT FILTER COMBOBOX |
---|
742 | ****************************************************************************/ |
---|
743 | void importDialog::fillImportTypeCombobox() |
---|
744 | { |
---|
745 | // NUMBER OF ENTRIES COUNTER |
---|
746 | int pos= 0; |
---|
747 | |
---|
748 | // ADD CSV ENTRY TO THE COMBOBOX |
---|
749 | XmString str_csv= CreateDlgString("CSV"); |
---|
750 | XmComboBoxAddItem(m_fileTypeWidget, str_csv, pos, true); pos++; |
---|
751 | |
---|
752 | // ADD XSLT IMPORT FILTER (FOR XML FILES) |
---|
753 | m_xslt= findXSLTFiles(const_cast<char*>("xslt")); |
---|
754 | |
---|
755 | if(m_xslt) |
---|
756 | { |
---|
757 | for(int i= 0; i < m_xslt->number; i++) |
---|
758 | { |
---|
759 | XmString str_import= CreateDlgString(m_xslt->importer[i]); |
---|
760 | XmComboBoxAddItem(m_fileTypeWidget, str_import, pos, true); pos++; |
---|
761 | } |
---|
762 | } |
---|
763 | |
---|
764 | // SET COMBOBOX LIST LENGTH TO <= 5 |
---|
765 | int visible= 5; |
---|
766 | if(pos < visible) visible= pos; |
---|
767 | XtVaSetValues(m_fileTypeWidget, |
---|
768 | XmNselectedPosition, (pos - 1), |
---|
769 | XmNvisibleItemCount, visible, |
---|
770 | NULL); |
---|
771 | } |
---|
772 | |
---|
773 | |
---|
774 | /**************************************************************************** |
---|
775 | * IMPORT DIALOG - FILL THE ARB ENTRY TYPE COMBOBOX |
---|
776 | ****************************************************************************/ |
---|
777 | void importDialog::fillARBTypeCombobox() |
---|
778 | { |
---|
779 | // ADD ITEMS |
---|
780 | int pos= 0; |
---|
781 | XmComboBoxAddItem(m_fieldTypeWidget, m_str_int, pos, true); pos++; |
---|
782 | XmComboBoxAddItem(m_fieldTypeWidget, m_str_float, pos, true); pos++; |
---|
783 | XmComboBoxAddItem(m_fieldTypeWidget, m_str_string, pos, true); pos++; |
---|
784 | |
---|
785 | // SET COMBOBOX LIST LENGTH TO <= 5 |
---|
786 | int visible= 5; |
---|
787 | if(pos < visible) visible= pos; |
---|
788 | XtVaSetValues(m_fieldTypeWidget, |
---|
789 | XmNselectedPosition, (pos - 1), |
---|
790 | XmNvisibleItemCount, visible, |
---|
791 | NULL); |
---|
792 | } |
---|
793 | |
---|
794 | |
---|
795 | /**************************************************************************** |
---|
796 | * IMPORT DIALOG - CLEAR ENTRIES BUTTON |
---|
797 | ****************************************************************************/ |
---|
798 | void importDialog::clearEntriesButtonCallback(Widget, XtPointer) |
---|
799 | { |
---|
800 | // RESET FILE NAME |
---|
801 | XtVaSetValues(m_filenameWidget, XmNvalue, "", NULL); |
---|
802 | |
---|
803 | // RESET SPECIES ENTRIES |
---|
804 | m_species= NULL; |
---|
805 | m_experiment= NULL; |
---|
806 | m_proteome= NULL; |
---|
807 | updateARBText(); |
---|
808 | } |
---|
809 | |
---|
810 | |
---|
811 | /**************************************************************************** |
---|
812 | * IMPORT DIALOG - CLEAR ENTRIES BUTTON |
---|
813 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
814 | ****************************************************************************/ |
---|
815 | void staticClearEntriesButtonCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
816 | { |
---|
817 | // GET POINTER OF THE ORIGINAL CALLER |
---|
818 | importDialog *iD= (importDialog *)clientData; |
---|
819 | |
---|
820 | // CALL CLASS MEMBER FUNCTION |
---|
821 | iD->clearEntriesButtonCallback(widget, callData); |
---|
822 | } |
---|
823 | |
---|
824 | |
---|
825 | /**************************************************************************** |
---|
826 | * IMPORT DIALOG - OPEN FILE BUTTON |
---|
827 | ****************************************************************************/ |
---|
828 | void importDialog::openFileButtonCallback(Widget, XtPointer) |
---|
829 | { |
---|
830 | // LOCAL VARIABLES |
---|
831 | char *filename; |
---|
832 | char *filetype; |
---|
833 | XmString *items; |
---|
834 | int item_pos; |
---|
835 | |
---|
836 | // GET SELECTED FILE TYPE (AS STRING) |
---|
837 | XtVaGetValues(m_fileTypeWidget, |
---|
838 | XmNitems, &items, |
---|
839 | XmNselectedPosition, &item_pos, |
---|
840 | NULL); |
---|
841 | XmStringGetLtoR(items[item_pos], XmFONTLIST_DEFAULT_TAG, &filetype); |
---|
842 | |
---|
843 | // GET SELECTED FILENAME |
---|
844 | filename= XmTextGetString(m_filenameWidget); |
---|
845 | |
---|
846 | // IMPORT DATA DEPENDING ON THE FILETYPE |
---|
847 | if(!strcmp(filetype, "CSV")) // TYPE == CSV |
---|
848 | { |
---|
849 | // IMPORT CSV DATA |
---|
850 | m_table= fileopenCSV(filename, ';'); |
---|
851 | |
---|
852 | if(!m_table) return; // THROW ERROR OR WARNING HERE !?!?! |
---|
853 | } |
---|
854 | |
---|
855 | // COPY FIRST COLUMN ENTRY TO COLUMN HEADER |
---|
856 | copyHeaderEntries(); |
---|
857 | |
---|
858 | // INIT ACTIVE HEADER (COLUMN COUNTER BEGINS WITH 0) |
---|
859 | m_activeHeader= 0; |
---|
860 | m_hasTableData= true; |
---|
861 | |
---|
862 | // UPDATE THE ENTRIES |
---|
863 | updateHeaderEntries(); |
---|
864 | } |
---|
865 | |
---|
866 | |
---|
867 | /**************************************************************************** |
---|
868 | * IMPORT DIALOG - OPEN FILE BUTTON |
---|
869 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
870 | ****************************************************************************/ |
---|
871 | void staticOpenFileButtonCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
872 | { |
---|
873 | // GET POINTER OF THE ORIGINAL CALLER |
---|
874 | importDialog *iD= (importDialog *)clientData; |
---|
875 | |
---|
876 | // CALL CLASS MEMBER FUNCTION |
---|
877 | iD->openFileButtonCallback(widget, callData); |
---|
878 | } |
---|
879 | |
---|
880 | |
---|
881 | /**************************************************************************** |
---|
882 | * IMPORT DIALOG - UPDATE HEADER ENTRIES |
---|
883 | ****************************************************************************/ |
---|
884 | void importDialog::updateHeaderEntries() |
---|
885 | { |
---|
886 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
887 | if(!m_hasTableData) return; |
---|
888 | |
---|
889 | // LOCAL VARIABLES |
---|
890 | char *buf= (char *)malloc(1024 * sizeof(char)); |
---|
891 | |
---|
892 | // SET ACTUAL COUNTER LABEL |
---|
893 | sprintf(buf, "Column %d of %d", m_activeHeader + 1, m_table->columns); |
---|
894 | XtVaSetValues(m_selectorText, XmNvalue, buf, NULL); |
---|
895 | |
---|
896 | // UPDATE THE SAMPLE LIST DATA |
---|
897 | updateSampleList(); |
---|
898 | |
---|
899 | // HEADER NAMES |
---|
900 | XtVaSetValues(m_columnHeaderWidget, XmNvalue, m_table->cell[m_activeHeader], NULL); |
---|
901 | XtVaSetValues(m_containerHeaderWidget, XmNvalue, m_table->header[m_activeHeader], NULL); |
---|
902 | |
---|
903 | // SET THE COLUMN TYPE COMBOBOX |
---|
904 | switch(m_table->columnType[m_activeHeader]) |
---|
905 | { |
---|
906 | case DATATYPE_INT: |
---|
907 | XmComboBoxSelectItem(m_fieldTypeWidget, m_str_int); |
---|
908 | break; |
---|
909 | case DATATYPE_FLOAT: |
---|
910 | XmComboBoxSelectItem(m_fieldTypeWidget, m_str_float); |
---|
911 | break; |
---|
912 | case DATATYPE_STRING: |
---|
913 | XmComboBoxSelectItem(m_fieldTypeWidget, m_str_string); |
---|
914 | break; |
---|
915 | } |
---|
916 | |
---|
917 | // CLEAR BUFFER |
---|
918 | free(buf); |
---|
919 | } |
---|
920 | |
---|
921 | |
---|
922 | /**************************************************************************** |
---|
923 | * IMPORT DIALOG - FILL SAMPLE LIST |
---|
924 | ****************************************************************************/ |
---|
925 | void importDialog::updateSampleList() |
---|
926 | { |
---|
927 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
928 | if(!m_hasTableData) return; |
---|
929 | |
---|
930 | // HARDCODED - FOR NOW |
---|
931 | int m_samplePosition= 1; |
---|
932 | |
---|
933 | // FETCH TABLE VARIABLES |
---|
934 | int columns= m_table->columns; |
---|
935 | char **header= m_table->header; |
---|
936 | |
---|
937 | // CREATE BUFFERS |
---|
938 | char *buf1= (char *)malloc(1025 * sizeof(char)); |
---|
939 | buf1[1024]= 0; |
---|
940 | char *buf2= (char *)malloc(1025 * sizeof(char)); |
---|
941 | buf2[1024]= 0; |
---|
942 | |
---|
943 | // CLEAR SAMPLE DATA |
---|
944 | XmListDeleteAllItems(m_sampleList); |
---|
945 | |
---|
946 | // SET HEADER NAME |
---|
947 | char headerBuffer[33]; |
---|
948 | headerBuffer[32]= 0; |
---|
949 | |
---|
950 | // ADD TITLE LINE TO SAMPLE LIST |
---|
951 | char *title= const_cast<char*>(" CONTAINER NAME | # | CONTENT..."); |
---|
952 | // char *title= "CONTAINER NAME | # | CONTENT..."; |
---|
953 | XmListAddItem(m_sampleList, CreateDlgString(title), 0); |
---|
954 | |
---|
955 | //FETCH ALL COLUMN ENTRIES |
---|
956 | for(int i= 0; i < columns; i++) |
---|
957 | { |
---|
958 | strncpy(headerBuffer, header[i], 32); |
---|
959 | |
---|
960 | // SET FIELD TYPE |
---|
961 | char *type; |
---|
962 | switch(m_table->columnType[i]) |
---|
963 | { |
---|
964 | case DATATYPE_INT: |
---|
965 | type= const_cast<char*>("I"); |
---|
966 | break; |
---|
967 | case DATATYPE_FLOAT: |
---|
968 | type= const_cast<char*>("F"); |
---|
969 | break; |
---|
970 | default: |
---|
971 | type= const_cast<char*>("S"); |
---|
972 | break; |
---|
973 | } |
---|
974 | |
---|
975 | // SET FIELD TEXT (NUMBER OF BYTES: 1024 - THE OTHER ENTRIES LENGTH) |
---|
976 | strncpy(buf1, m_table->cell[(m_samplePosition * columns) + i], (1024 - 32 - 1 - 6)); |
---|
977 | |
---|
978 | // CREATE FORMATED OUTPUT STRING |
---|
979 | sprintf(buf2, "%32s | %s | %s", headerBuffer, type, buf1); |
---|
980 | |
---|
981 | // ADD STRING TO SAMPLE LIST |
---|
982 | XmListAddItem(m_sampleList, CreateDlgString(buf2), 0); |
---|
983 | } |
---|
984 | |
---|
985 | // SELECT THE ACTIVE ENTRY |
---|
986 | XmListSelectPos(m_sampleList, m_activeHeader + 2, false); |
---|
987 | |
---|
988 | // MAKE LIST SCROLL TO THE CORRECT POSITION |
---|
989 | int topItem, visibleItems; |
---|
990 | XtVaGetValues(m_sampleList, |
---|
991 | XmNtopItemPosition, &topItem, |
---|
992 | XmNvisibleItemCount, &visibleItems, |
---|
993 | NULL); |
---|
994 | |
---|
995 | if((m_activeHeader + 2) < topItem) |
---|
996 | XtVaSetValues(m_sampleList, |
---|
997 | XmNtopItemPosition, m_activeHeader + 2, |
---|
998 | NULL); |
---|
999 | else if((m_activeHeader + 3) > (topItem + visibleItems)) |
---|
1000 | XtVaSetValues(m_sampleList, |
---|
1001 | XmNtopItemPosition, m_activeHeader - visibleItems + 3, |
---|
1002 | NULL); |
---|
1003 | |
---|
1004 | // FREE BUFFER |
---|
1005 | free(buf1); |
---|
1006 | free(buf2); |
---|
1007 | } |
---|
1008 | |
---|
1009 | |
---|
1010 | /**************************************************************************** |
---|
1011 | * IMPORT DIALOG - COLUMN DOWN COUNTER |
---|
1012 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1013 | ****************************************************************************/ |
---|
1014 | void staticColumnDownCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1015 | { |
---|
1016 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1017 | importDialog *iD= (importDialog *)clientData; |
---|
1018 | |
---|
1019 | // CALL CLASS MEMBER FUNCTION |
---|
1020 | iD->columnDownCallback(widget, callData); |
---|
1021 | } |
---|
1022 | |
---|
1023 | |
---|
1024 | /**************************************************************************** |
---|
1025 | * IMPORT DIALOG - COLUMN DOWN COUNTER |
---|
1026 | ****************************************************************************/ |
---|
1027 | void importDialog::columnDownCallback(Widget, XtPointer) |
---|
1028 | { |
---|
1029 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1030 | if(!m_hasTableData) return; |
---|
1031 | |
---|
1032 | int columns= m_table->columns; |
---|
1033 | |
---|
1034 | // UPDATE HEADER COUNTER |
---|
1035 | m_activeHeader--; |
---|
1036 | |
---|
1037 | // IF COUNTER IS BEYOND UPPER LIMIT, DECREASE IT |
---|
1038 | if(m_activeHeader < 0) |
---|
1039 | m_activeHeader = m_activeHeader + columns; |
---|
1040 | |
---|
1041 | // UPDATE DATA |
---|
1042 | updateHeaderEntries(); |
---|
1043 | } |
---|
1044 | |
---|
1045 | |
---|
1046 | /**************************************************************************** |
---|
1047 | * IMPORT DIALOG - COLUMN UP COUNTER |
---|
1048 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1049 | ****************************************************************************/ |
---|
1050 | void staticColumnUpCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1051 | { |
---|
1052 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1053 | importDialog *iD= (importDialog *)clientData; |
---|
1054 | |
---|
1055 | // CALL CLASS MEMBER FUNCTION |
---|
1056 | iD->columnUpCallback(widget, callData); |
---|
1057 | } |
---|
1058 | |
---|
1059 | |
---|
1060 | /**************************************************************************** |
---|
1061 | * IMPORT DIALOG - COLUMN UP COUNTER |
---|
1062 | ****************************************************************************/ |
---|
1063 | void importDialog::columnUpCallback(Widget, XtPointer) |
---|
1064 | { |
---|
1065 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1066 | if(!m_hasTableData) return; |
---|
1067 | |
---|
1068 | int columns= m_table->columns; |
---|
1069 | |
---|
1070 | // UPDATE HEADER COUNTER |
---|
1071 | m_activeHeader++; |
---|
1072 | |
---|
1073 | // IF COUNTER IS BEYOND UPPER LIMIT, DECREASE IT |
---|
1074 | if(m_activeHeader >= columns) |
---|
1075 | m_activeHeader= m_activeHeader - columns; |
---|
1076 | |
---|
1077 | // UPDATE DATA |
---|
1078 | updateHeaderEntries(); |
---|
1079 | } |
---|
1080 | |
---|
1081 | |
---|
1082 | /**************************************************************************** |
---|
1083 | * IMPORT DIALOG - COPY COLUMN HEADER TO ARB HEADER |
---|
1084 | ****************************************************************************/ |
---|
1085 | void importDialog::copyHeaderEntries() |
---|
1086 | { |
---|
1087 | int columns= m_table->columns; |
---|
1088 | char **header= m_table->header; |
---|
1089 | char **cell= m_table->cell; |
---|
1090 | // char *entry; |
---|
1091 | |
---|
1092 | for(int i= 0; i < columns; i++) |
---|
1093 | { |
---|
1094 | // CLEAR OLD HEADER, IF AVAILABLE |
---|
1095 | // CLEAN STRING FOR USAGE AS ARB KEY |
---|
1096 | freeset(header[i], GBS_string_2_key(cell[i])); |
---|
1097 | } |
---|
1098 | |
---|
1099 | m_table->hasHeader= true; |
---|
1100 | } |
---|
1101 | |
---|
1102 | |
---|
1103 | /**************************************************************************** |
---|
1104 | * IMPORT DIALOG - RESET THE ARB HEADER ENTRIES |
---|
1105 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1106 | ****************************************************************************/ |
---|
1107 | void staticResetHeaderButtonCallback(Widget, XtPointer clientData, XtPointer) |
---|
1108 | { |
---|
1109 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1110 | importDialog *iD= (importDialog *)clientData; |
---|
1111 | |
---|
1112 | // CALL CLASS MEMBER FUNCTION |
---|
1113 | iD->copyHeaderEntries(); |
---|
1114 | iD->updateHeaderEntries(); |
---|
1115 | } |
---|
1116 | |
---|
1117 | |
---|
1118 | /**************************************************************************** |
---|
1119 | * IMPORT DIALOG - TABLE HEADER CHANGED CALLBACK |
---|
1120 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1121 | ****************************************************************************/ |
---|
1122 | void staticHeaderChangedCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1123 | { |
---|
1124 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1125 | importDialog *iD= (importDialog *)clientData; |
---|
1126 | |
---|
1127 | // CALL CLASS MEMBER FUNCTION |
---|
1128 | iD->headerChangedCallback(widget, callData); |
---|
1129 | } |
---|
1130 | |
---|
1131 | |
---|
1132 | /**************************************************************************** |
---|
1133 | * IMPORT DIALOG - TABLE HEADER CHANGED CALLBACK |
---|
1134 | ****************************************************************************/ |
---|
1135 | void importDialog::headerChangedCallback(Widget, XtPointer) |
---|
1136 | { |
---|
1137 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1138 | if(!m_hasTableData) return; |
---|
1139 | |
---|
1140 | char **header= m_table->header; |
---|
1141 | |
---|
1142 | // GET CHANGED HEADER STRING |
---|
1143 | char *str= XmTextGetString(m_containerHeaderWidget); |
---|
1144 | |
---|
1145 | // CLEAN STRING FOR USAGE IN ARB |
---|
1146 | str= GBS_string_2_key(str); |
---|
1147 | |
---|
1148 | // FREE OLD ENTRY IF AVAILABLE |
---|
1149 | if(header[m_activeHeader]) free(header[m_activeHeader]); |
---|
1150 | |
---|
1151 | // CREATE NEW ENTRY |
---|
1152 | char *entry= (char *)malloc((strlen(str) + 1) * sizeof(char)); |
---|
1153 | strcpy(entry, str); |
---|
1154 | |
---|
1155 | header[m_activeHeader]= entry; |
---|
1156 | |
---|
1157 | // RETURN THE STRING AS IT MAY HAVE CHANGED... |
---|
1158 | XtVaSetValues(m_containerHeaderWidget, XmNvalue, m_table->header[m_activeHeader], NULL); |
---|
1159 | |
---|
1160 | // UPDATE THE SAMPLE LIST DATA |
---|
1161 | updateSampleList(); |
---|
1162 | } |
---|
1163 | |
---|
1164 | |
---|
1165 | /**************************************************************************** |
---|
1166 | * IMPORT DIALOG - IMPORT DATA INTO ARB |
---|
1167 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1168 | ****************************************************************************/ |
---|
1169 | void staticImportDataCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1170 | { |
---|
1171 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1172 | importDialog *iD= (importDialog *)clientData; |
---|
1173 | |
---|
1174 | // CALL CLASS MEMBER FUNCTION |
---|
1175 | iD->importDataCallback(widget, callData); |
---|
1176 | } |
---|
1177 | |
---|
1178 | |
---|
1179 | /**************************************************************************** |
---|
1180 | * IMPORT DIALOG - IMPORT DATA INTO ARB |
---|
1181 | ****************************************************************************/ |
---|
1182 | void importDialog::importDataCallback(Widget, XtPointer) |
---|
1183 | { |
---|
1184 | // CREATE IMPORT DATA ENTRY |
---|
1185 | importData data; |
---|
1186 | |
---|
1187 | // INITIALIZE DATA ENTRIES |
---|
1188 | data.species= m_species; |
---|
1189 | data.experiment= m_experiment; |
---|
1190 | data.proteome= m_proteome; |
---|
1191 | |
---|
1192 | // IMPORT CSV DATA INTO ARB |
---|
1193 | importCSV(m_table, &data); |
---|
1194 | } |
---|
1195 | |
---|
1196 | |
---|
1197 | /**************************************************************************** |
---|
1198 | * IMPORT DIALOG - ARB DATATYPE CHANGED CALLBACK |
---|
1199 | ****************************************************************************/ |
---|
1200 | void importDialog::changedDatatypeCallback(Widget, XtPointer callData) |
---|
1201 | { |
---|
1202 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1203 | if(!m_hasTableData) return; |
---|
1204 | |
---|
1205 | // GET COMBOBOX SELECTION STRUCT |
---|
1206 | XmComboBoxCallbackStruct *cb= (XmComboBoxCallbackStruct *)callData; |
---|
1207 | |
---|
1208 | // FETCH SELECTED ENTRY (STRING) FROM STRUCT |
---|
1209 | char *type= (char *)XmStringUnparse(cb->item_or_text, |
---|
1210 | XmFONTLIST_DEFAULT_TAG, |
---|
1211 | XmCHARSET_TEXT, XmCHARSET_TEXT, |
---|
1212 | NULL, 0, XmOUTPUT_ALL); |
---|
1213 | |
---|
1214 | // IF AN EVENT OCCURED... |
---|
1215 | if(cb->event) |
---|
1216 | { |
---|
1217 | // DEPENDING ON THE SELECTED STRING, SET THE NEW COLUMN DATATYPE |
---|
1218 | if(!strcmp(type, "INT")) |
---|
1219 | m_table->columnType[m_activeHeader]= DATATYPE_INT; |
---|
1220 | else if(!strcmp(type, "FLOAT")) |
---|
1221 | m_table->columnType[m_activeHeader]= DATATYPE_FLOAT; |
---|
1222 | else |
---|
1223 | m_table->columnType[m_activeHeader]= DATATYPE_STRING; |
---|
1224 | } |
---|
1225 | |
---|
1226 | // UPDATE THE SAMPLE LIST DATA |
---|
1227 | updateSampleList(); |
---|
1228 | |
---|
1229 | // FREE ENTRY STRING |
---|
1230 | XtFree(type); |
---|
1231 | } |
---|
1232 | |
---|
1233 | |
---|
1234 | /**************************************************************************** |
---|
1235 | * IMPORT DIALOG - ARB DATATYPE CHANGED CALLBACK |
---|
1236 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1237 | ****************************************************************************/ |
---|
1238 | void staticChangedDatatypeCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1239 | { |
---|
1240 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1241 | importDialog *iD= (importDialog *)clientData; |
---|
1242 | |
---|
1243 | // CALL CLASS MEMBER FUNCTION |
---|
1244 | iD->changedDatatypeCallback(widget, callData); |
---|
1245 | } |
---|
1246 | |
---|
1247 | |
---|
1248 | /**************************************************************************** |
---|
1249 | * IMPORT DIALOG - ANOTHER SAMPLE LIST ENTRY WAS SELECTED |
---|
1250 | ****************************************************************************/ |
---|
1251 | void importDialog::sampleListEntryCallback(Widget, XtPointer callData) |
---|
1252 | { |
---|
1253 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1254 | if(!m_hasTableData) return; |
---|
1255 | |
---|
1256 | // GET LIST CALLBACK STRUCT (SELECTED ITEM ETC.) |
---|
1257 | XmListCallbackStruct *cb= (XmListCallbackStruct *)callData; |
---|
1258 | |
---|
1259 | // GET & SET NEW POSITION |
---|
1260 | if(cb->item_position > 1) m_activeHeader= cb->item_position - 2; |
---|
1261 | |
---|
1262 | // JUST TO AVOID COMPLICATIONS |
---|
1263 | if(m_activeHeader < 0) m_activeHeader= 0; |
---|
1264 | else if(m_activeHeader >= m_table->columns) m_activeHeader= m_table->columns - 1; |
---|
1265 | |
---|
1266 | // UPDATE THE HEADER ENTRIES... |
---|
1267 | updateHeaderEntries(); |
---|
1268 | } |
---|
1269 | |
---|
1270 | |
---|
1271 | /**************************************************************************** |
---|
1272 | * IMPORT DIALOG - ANOTHER SAMPLE LIST ENTRY WAS SELECTED |
---|
1273 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1274 | ****************************************************************************/ |
---|
1275 | void staticSampleListEntryCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1276 | { |
---|
1277 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1278 | importDialog *iD= (importDialog *)clientData; |
---|
1279 | |
---|
1280 | // CALL CLASS MEMBER FUNCTION |
---|
1281 | iD->sampleListEntryCallback(widget, callData); |
---|
1282 | } |
---|
1283 | |
---|
1284 | |
---|
1285 | /**************************************************************************** |
---|
1286 | * IMPORT DIALOG - OPEN AN EXTERNAL DIALOG FOR HEADER NAME SELECTION |
---|
1287 | ****************************************************************************/ |
---|
1288 | void importDialog::externHeaderSelectionCallback(Widget, XtPointer) |
---|
1289 | { |
---|
1290 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1291 | if(!m_hasTableData) return; |
---|
1292 | |
---|
1293 | |
---|
1294 | static entrySelectionDialog *esD; |
---|
1295 | |
---|
1296 | // if(!esD) |
---|
1297 | // { |
---|
1298 | // CREATE NEW SELECTION DIALOG |
---|
1299 | esD= new entrySelectionDialog(this); |
---|
1300 | |
---|
1301 | // ADD ENTRY CHANGED CALLBACK |
---|
1302 | esD->setListCallback(staticExternHeaderChangedCallback); |
---|
1303 | // } |
---|
1304 | // else |
---|
1305 | // { |
---|
1306 | // esD->show(); |
---|
1307 | // } |
---|
1308 | |
---|
1309 | |
---|
1310 | |
---|
1311 | // // GET LIST CALLBACK STRUCT (SELECTED ITEM ETC.) |
---|
1312 | // XmListCallbackStruct *cb= (XmListCallbackStruct *)callData; |
---|
1313 | // |
---|
1314 | // // GET & SET NEW POSITION |
---|
1315 | // if(cb->item_position > 1) m_activeHeader= cb->item_position - 2; |
---|
1316 | // |
---|
1317 | // // JUST TO AVOID COMPLICATIONS |
---|
1318 | // if(m_activeHeader < 0) m_activeHeader= 0; |
---|
1319 | // else if(m_activeHeader >= m_table->columns) m_activeHeader= m_table->columns - 1; |
---|
1320 | // |
---|
1321 | // // DEBUG DEBUG DEBUG |
---|
1322 | // printf("DEBUG: ITEM= %d, ACTIVE= %d\n", cb->item_position, m_activeHeader); |
---|
1323 | // // DEBUG DEBUG DEBUG |
---|
1324 | // |
---|
1325 | // // UPDATE THE HEADER ENTRIES... |
---|
1326 | // updateHeaderEntries(); |
---|
1327 | } |
---|
1328 | |
---|
1329 | |
---|
1330 | /**************************************************************************** |
---|
1331 | * IMPORT DIALOG - OPEN AN EXTERNAL DIALOG FOR HEADER NAME SELECTION |
---|
1332 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1333 | ****************************************************************************/ |
---|
1334 | void staticExternHeaderSelectionCallback(Widget widget, XtPointer clientData, XtPointer callData) |
---|
1335 | { |
---|
1336 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1337 | importDialog *iD= (importDialog *)clientData; |
---|
1338 | |
---|
1339 | // CALL CLASS MEMBER FUNCTION |
---|
1340 | iD->externHeaderSelectionCallback(widget, callData); |
---|
1341 | } |
---|
1342 | |
---|
1343 | |
---|
1344 | /**************************************************************************** |
---|
1345 | * CALLBACK - HEADER NAME CHANGED EXTERNALLY CALLBACK |
---|
1346 | * !!! CAUTION: THIS IS A WRAPPER FUNCTION !!! |
---|
1347 | ****************************************************************************/ |
---|
1348 | void staticExternHeaderChangedCallback(Widget, XtPointer clientData, XtPointer callData) |
---|
1349 | { |
---|
1350 | // GET POINTER OF THE ORIGINAL CALLER |
---|
1351 | importDialog *iD= (importDialog *)clientData; |
---|
1352 | |
---|
1353 | // GET SPECIES NAME FROM CALLDATA |
---|
1354 | char *name= *((char **)callData); |
---|
1355 | |
---|
1356 | // SET NEW HEADER NAME |
---|
1357 | iD->setHeaderName(name); |
---|
1358 | |
---|
1359 | // UPDATE OUTPUT |
---|
1360 | // iD->updateARBText(); |
---|
1361 | } |
---|
1362 | |
---|
1363 | |
---|
1364 | /**************************************************************************** |
---|
1365 | * MAIN DIALOG - SET SPECIES NAME |
---|
1366 | ****************************************************************************/ |
---|
1367 | void importDialog::setHeaderName(char *name) |
---|
1368 | { |
---|
1369 | // RETURN, IF NO TABLE DATA IS AVAILABLE |
---|
1370 | if(!m_hasTableData) return; |
---|
1371 | |
---|
1372 | char **header= m_table->header; |
---|
1373 | |
---|
1374 | // FREE OLD ENTRY IF AVAILABLE |
---|
1375 | if(header[m_activeHeader]) free(header[m_activeHeader]); |
---|
1376 | |
---|
1377 | // CREATE NEW ENTRY |
---|
1378 | char *entry= (char *)malloc((strlen(name) + 1) * sizeof(char)); |
---|
1379 | strcpy(entry, name); |
---|
1380 | |
---|
1381 | header[m_activeHeader]= entry; |
---|
1382 | |
---|
1383 | // RETURN THE STRING AS IT MAY HAVE CHANGED... |
---|
1384 | XtVaSetValues(m_containerHeaderWidget, XmNvalue, m_table->header[m_activeHeader], NULL); |
---|
1385 | |
---|
1386 | // UPDATE THE SAMPLE LIST DATA |
---|
1387 | updateSampleList(); |
---|
1388 | } |
---|
1389 | |
---|
1390 | |
---|