source: branches/port5/lib/arb_tcp_org.dat

#*******************    Syntax ***********************************
#
#       [USER:]SERVER_ID                HOST:IP_NR      [programm       args]
#       [USER:]SERVER_ID                :SOCKETPATH     [programm       args]
#               [xxx] means optional field
#               all $(enviroment_variable) are replaced by the value of the 'enviroment_variable'.
#               if host is localhost then it is replaced by the result of `hostname`.
#
#   Specifying an username before the SERVER_ID makes the server user specific.
#
#   This file is searched at several locations:
#       - in the current directory
#       - in the $(HOME) (=home directory of the current user)
#       - in $(ARBHOME)/lib
#   The first occurrance found is taken.
#
#       Existing SERVER_IDs:
#
#               ARB_DB_SERVER               Your private database server. It is automatically started
#               ARB_PT_SERVER               Default PT_SERVER for PB_RETRIEVE (privat TU_Munich server)
#               ARB_PT_SERVERn              Global PT_SERVERs. Needed for fast database search (align seq, probe des.)
#                                                   n starts from 0 to max, no number can be excluded !!!
#               ARB_NAME_SERVER             Generates short names for species (using 'acc')
#               ARB_NAME_SERVER_field   Generates short names for species (using 'acc' and 'field')
#
#*****************************************************************

# version of arb_tcp.dat
ARB_TCP_DAT_VERSION 2

#***********    Private Servers (for each user) ******************
#
# This is a local server, running on one machine. Each user has his own socket:
# ARB_PID is an Enviroment Variable which is set by the command 'arb' to its own process id
# see programm $ARBHOME/SH/arb_clean to remove the sockets

ARB_DB_SERVER           :/tmp/arb_db_$(USER)_$(ARB_PID)

# If you want to run programs on a workstation cluster, you have to assign your arbdb server
# and one ip-id for each user. To choose an ip_id choose any number between 1000 and 4000 and
# examine /etc/services whether this ip-id has not yet been allocated by another programm
#       smith:ARB_DB_SERVER     myhost:4011             // socket for smith ('arb' has to be started on 'myhost')
#       ludwig:ARB_DB_SERVER    myhost:4012             // socket for ludwig
#       ARB_DB_SERVER           :/tmp/arb_db_$(USER)_$(ARB_PID) // and sockets for all others

#***********    Global Servers (for all users) ******************
#
#***********    Nameserver The server should run on the nfs server ******************
# The primary nameserver (ARB_NAME_SERVER) uses the field 'acc' for species identification
#
# You may define additional nameservers, using one additional field for identification.
# The defined nameserver 'ARB_NAME_SERVER_START' uses the fields 'acc' and 'start'.

ARB_NAME_SERVER                 localhost:3020          arb_name_server -d$(ARBHOME)/lib/nas/names.dat
ARB_NAME_SERVER_START           localhost:3021          arb_name_server -d$(ARBHOME)/lib/nas/names_start.dat -fstart=1
# ARB_NAME_SERVER_STRAIN          localhost:3022          arb_name_server -d$(ARBHOME)/lib/nas/names_strain.dat -fstrain=
# ARB_NAME_SERVER_POS_START       localhost:3023          arb_name_server -d$(ARBHOME)/lib/nas/names_pos_start.dat -fpos_start=1

#***********    PT_SERVERS The server should run on the nfs server ******************
#*******     You may add new pt_servers here: (numbers must be continued)   *********
# Note: If the database name is '!ASSUME_RUNNING' (i.e. -D!ASSUME_RUNNING), ARB will not
#       try to start/stop/update/... the server and will not check DB for existance.
#       To use such a PT-Server you'll have to start it manually on the remote host

ARB_PT_SERVER0          localhost:3030          arb_pt_server   -D$(ARBHOME)/lib/pts/probe_server.arb RESERVED
ARB_PT_SERVER1          localhost:3031          arb_pt_server   -D$(ARBHOME)/lib/pts/LSU_rRNA.arb
ARB_PT_SERVER2          localhost:3032          arb_pt_server   -D$(ARBHOME)/lib/pts/SSU_rRNA.arb
ARB_PT_SERVER3          localhost:3033          arb_pt_server   -D$(ARBHOME)/lib/pts/user1.arb
ARB_PT_SERVER4          localhost:3034          arb_pt_server   -D$(ARBHOME)/lib/pts/user2.arb
ARB_PT_SERVER5          localhost:3035          arb_pt_server   -D$(ARBHOME)/lib/pts/user3.arb
ARB_PT_SERVER6          localhost:3036          arb_pt_server   -D$(ARBHOME)/lib/pts/user4.arb
ARB_PT_SERVER7          localhost:3037          arb_pt_server   -D$(ARBHOME)/lib/pts/user5.arb
ARB_PT_SERVER8          localhost:3038          arb_pt_server   -D$(ARBHOME)/lib/pts/user6.arb
ARB_PT_SERVER9          localhost:3039          arb_pt_server   -D$(ARBHOME)/lib/pts/user7.arb
ARB_PT_SERVER10         localhost:3040          arb_pt_server   -D$(ARBHOME)/lib/pts/user8.arb