source: branches/port5/lib/pictures/awtc/faligner.fig

Last change on this file was 5485, checked in by westram, 17 years ago
  • Summary: - moved common family find awars and their GUI elements to global functions

in awtc_next_neighbours

  • Integrated Aligners: . shortened several function interfaces by using structs . use custom family find parameters . store how many base positions of which relative have been used for

alignment (in field 'used_rels'). Do not store relatives of which
no base positions were used.

. respect sort order of relatives given by PT server (dont sort self, just test)
. documented field 'used_rels'
. linked family settings help with aligner help
. added 'Settings'-subdialog to aligner-settings (family_settings.fig)
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 2.2 KB
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1#FIG 3.2  Produced by xfig version 3.2.5
2Landscape
3Center
4Metric
5A4     
6100.00
7Single
8-2
91200 2
106 3285 9675 8055 9990
114 0 -1 0 0 18 12 0.0000 4 180 510 3300 9945 $align\001
124 0 -1 0 0 0 12 0.0000 4 180 3270 4875 9795 Tip: In the main window you can use Ctrl-A\001
134 0 -1 0 0 0 12 0.0000 4 180 2850 5250 9945 to align with the adjusted parameters.\001
14-6
156 900 1935 9630 2160
166 5985 1935 9630 2160
174 0 -1 0 0 18 12 0.0000 4 165 660 6000 2100 $swhat\001
184 2 -1 0 0 18 12 0.0000 4 165 900 9600 2100 $to:swhat\001
19-6
204 0 -1 0 0 18 12 0.0000 4 165 555 900 2100 $what\001
21-6
226 900 5850 6705 6480
236 5715 6300 6705 6480
244 0 -1 0 0 18 12 0.0000 4 165 705 5775 6450 $around\001
254 2 -1 0 0 18 12 0.0000 4 165 945 6675 6450 $to:around\001
26-6
274 0 -1 0 0 18 12 0.0000 4 180 600 900 6000 $range\001
28-6
296 7830 2295 8190 3105
302 1 0 2 -1 -1 0 0 -1 0.000 0 0 -1 0 0 2
31         8025 2325 8025 3075
322 1 0 2 -1 -1 0 0 -1 0.000 0 0 -1 0 0 3
33         7875 2925 8025 3075 8175 2925
34-6
356 900 9135 5040 9450
364 0 -1 0 0 18 12 0.0000 4 180 3360 900 9300 Show messages about missing gaps?\001
374 0 -1 0 0 18 12 0.0000 4 180 525 4500 9375 $gaps\001
38-6
396 5985 3465 9630 3645
404 0 -1 0 0 18 12 0.0000 4 180 855 6000 3600 $sagainst\001
414 2 -1 0 0 18 12 0.0000 4 180 1095 9600 3600 $to:sagainst\001
42-6
432 2 0 1 -1 -1 0 0 -1 0.000 0 0 0 0 0 5
44         9900 10200 9900 300 600 300 600 10200 9900 10200
454 0 -1 0 0 18 12 0.0000 4 165 570 750 750 $close\001
464 2 -1 0 0 18 12 0.0000 4 180 465 9750 750 $help\001
474 0 -1 0 0 18 12 0.0000 4 180 690 900 1170 $aligner\001
484 0 -1 0 0 18 12 0.0000 4 180 1110 6030 1530 $island_para\001
494 0 -1 0 0 18 12 0.0000 4 180 1005 900 7500 $protection\001
504 0 -1 0 0 18 12 0.0000 4 180 540 8550 2850 $copy\001
514 0 -1 0 0 18 12 0.0000 4 165 645 900 8100 $mirror\001
524 0 -1 0 0 18 12 0.0000 4 165 615 900 8700 $insert\001
534 0 -1 0 0 18 12 0.0000 4 180 1035 8550 8100 $rev_compl\001
544 0 -1 0 0 18 12 0.0000 4 180 750 900 3600 $against\001
554 0 -1 0 0 18 12 0.0000 4 180 975 2550 4950 $pt_server\001
564 2 -1 0 0 18 12 0.0000 4 180 1215 6150 4950 $to:pt_server\001
574 0 -1 0 0 18 12 0.0000 4 180 720 7515 4950 $use_ali\001
584 0 -1 0 0 18 12 0.0000 4 165 720 7515 5475 $relSett\001
594 0 -1 0 0 18 12 0.0000 4 165 885 2700 5475 $relatives\001
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