1 | #Please insert up references in the next lines (line starts with keyword UP) |
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2 | UP arb.hlp |
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3 | UP glossary.hlp |
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4 | |
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5 | #Please insert subtopic references (line starts with keyword SUB) |
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6 | SUB rename.hlp |
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7 | |
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8 | # Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain} |
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9 | |
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10 | #************* Title of helpfile !! and start of real helpfile ******** |
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11 | TITLE Synchronize species IDs |
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12 | |
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13 | OCCURRENCE ARB_NT/Species/Synchronize IDs |
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14 | |
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15 | DESCRIPTION Automatically creates unique identifiers (=shortnames) for the |
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16 | species entries in the database. The entries are identified by |
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17 | their accession numbers (public databases). |
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18 | These IDs are created using information from the 'full_name'. |
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19 | Usually, the first three letters are taken from the genus designation, |
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20 | the remaining letters from the species name. |
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21 | |
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22 | If there are duplicated entries (same accession number - |
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23 | different 'full_name'; no accession number - same 'full_name') |
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24 | the different versions are indicated by appending running |
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25 | numbers separated from the 'name' by a dot. |
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26 | |
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27 | Select the 'Synchronize IDs' entry of the 'Species' menu to display |
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28 | the 'Synchronize species IDs' window. |
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29 | |
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30 | NOTES The IDs are stored with the database. They are protected versus change |
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31 | to avoid assigning the same ID to different species. |
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32 | |
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33 | It is recommended to assign accession numbers (field 'acc') to species |
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34 | entries (sequences) which are not from public databases and therefore |
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35 | dont have an accession number yet. This is done automatically when |
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36 | importing new sequences. |
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37 | |
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38 | EXAMPLES None |
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39 | |
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40 | WARNINGS None |
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41 | |
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42 | BUGS No bugs known |
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