1 | // =============================================================== // |
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2 | // // |
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3 | // File : TreeDisplay.hxx // |
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4 | // Purpose : // |
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5 | // // |
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6 | // Institute of Microbiology (Technical University Munich) // |
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7 | // http://www.arb-home.de/ // |
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8 | // // |
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9 | // =============================================================== // |
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10 | |
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11 | #ifndef TREEDISPLAY_HXX |
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12 | #define TREEDISPLAY_HXX |
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13 | |
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14 | #ifndef AP_TREE_HXX |
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15 | #include <AP_Tree.hxx> |
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16 | #endif |
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17 | #ifndef AWT_CANVAS_HXX |
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18 | #include <awt_canvas.hxx> |
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19 | #endif |
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20 | |
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21 | #define td_assert(cond) arb_assert(cond) |
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22 | |
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23 | #define AWAR_DTREE_BASELINEWIDTH "awt/dtree/baselinewidth" |
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24 | #define AWAR_DTREE_VERICAL_DIST "awt/dtree/verticaldist" |
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25 | #define AWAR_DTREE_AUTO_JUMP "awt/dtree/autojump" |
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26 | #define AWAR_DTREE_AUTO_JUMP_TREE "awt/dtree/autojump_tree" |
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27 | #define AWAR_DTREE_SHOW_CIRCLE "awt/dtree/show_circle" |
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28 | #define AWAR_DTREE_SHOW_BRACKETS "awt/dtree/show_brackets" |
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29 | #define AWAR_DTREE_CIRCLE_ZOOM "awt/dtree/circle_zoom" |
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30 | #define AWAR_DTREE_CIRCLE_MAX_SIZE "awt/dtree/max_size" |
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31 | #define AWAR_DTREE_USE_ELLIPSE "awt/dtree/ellipse" |
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32 | #define AWAR_DTREE_GREY_LEVEL "awt/dtree/greylevel" |
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33 | |
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34 | #define AWAR_DTREE_RADIAL_ZOOM_TEXT "awt/dtree/radial/zoomtext" |
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35 | #define AWAR_DTREE_RADIAL_XPAD "awt/dtree/radial/xpadding" |
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36 | |
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37 | #define AWAR_DTREE_DENDRO_ZOOM_TEXT "awt/dtree/dendro/zoomtext" |
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38 | #define AWAR_DTREE_DENDRO_XPAD "awt/dtree/dendro/xpadding" |
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39 | |
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40 | void awt_create_dtree_awars(AW_root *aw_root, AW_default db); |
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41 | |
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42 | #define NT_BOX_WIDTH 7 // pixel |
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43 | #define NT_ROOT_WIDTH 9 |
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44 | #define NT_SELECTED_WIDTH 11 |
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45 | |
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46 | #define AWT_TREE(ntw) DOWNCAST(AWT_graphic_tree*, (ntw)->gfx) |
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47 | |
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48 | |
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49 | enum AP_tree_display_type { |
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50 | AP_TREE_NORMAL, // normal tree display (dendrogram) |
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51 | AP_TREE_RADIAL, // radial tree display |
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52 | AP_TREE_IRS, // like AP_TREE_NORMAL, with folding line |
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53 | AP_LIST_NDS, |
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54 | AP_LIST_SIMPLE // simple display only showing name (used at startup to avoid NDS error messages) |
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55 | }; |
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56 | |
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57 | enum AP_tree_jump_type { // bit-values |
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58 | AP_JUMP_KEEP_VISIBLE = 1, // automatically make selected node visible (on changes) |
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59 | AP_JUMP_UNFOLD_GROUPS = 2, // |
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60 | AP_JUMP_FORCE_VCENTER = 4, // force vertical centering (even if visible) |
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61 | AP_JUMP_ALLOW_HCENTER = 8, // force horizontal centering (if vertically centered); only works together with AP_JUMP_FORCE_VCENTER |
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62 | AP_JUMP_FORCE_HCENTER = 16, // force horizontal centering |
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63 | AP_JUMP_BE_VERBOOSE = 32, // tell why nothing happened etc. |
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64 | |
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65 | // convenience defs: |
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66 | AP_DONT_JUMP = 0, |
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67 | AP_JUMP_SMART_CENTER = AP_JUMP_FORCE_VCENTER|AP_JUMP_ALLOW_HCENTER, |
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68 | AP_JUMP_FORCE_CENTER = AP_JUMP_FORCE_VCENTER|AP_JUMP_FORCE_HCENTER, |
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69 | |
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70 | AP_JUMP_BY_BUTTON = AP_JUMP_SMART_CENTER|AP_JUMP_UNFOLD_GROUPS|AP_JUMP_BE_VERBOOSE, |
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71 | }; |
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72 | |
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73 | inline bool sort_is_list_style(AP_tree_display_type sort) { return sort == AP_LIST_NDS || sort == AP_LIST_SIMPLE; } |
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74 | inline bool sort_is_tree_style(AP_tree_display_type sort) { return !sort_is_list_style(sort); } |
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75 | |
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76 | |
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77 | class AWT_graphic_tree_group_state; |
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78 | |
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79 | struct AWT_scaled_font_limits { |
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80 | double ascent; |
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81 | double descent; |
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82 | double height; |
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83 | double width; |
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84 | |
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85 | void init(const AW_font_limits& font_limits, double factor) { |
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86 | ascent = font_limits.ascent*factor; |
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87 | descent = font_limits.descent*factor; |
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88 | height = font_limits.height*factor; |
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89 | width = font_limits.width*factor; |
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90 | } |
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91 | }; |
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92 | |
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93 | enum AD_MAP_VIEWER_TYPE { |
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94 | ADMVT_NONE = 0, |
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95 | ADMVT_INFO, |
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96 | ADMVT_WWW, |
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97 | ADMVT_SELECT |
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98 | }; |
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99 | |
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100 | typedef void (*AD_map_viewer_cb)(GBDATA *gbd, AD_MAP_VIEWER_TYPE type); |
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101 | |
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102 | struct DendroSubtreeLimits { |
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103 | double y_branch; // ypos of branch to subtree |
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104 | double y_top; // top ypos of whole subtree |
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105 | double y_bot; // bottom ypos of whole subtree |
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106 | double x_right; // rightmost xpos of whole subtree |
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107 | |
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108 | void combine(const DendroSubtreeLimits& other) { |
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109 | y_top = std::min(y_top, other.y_top); |
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110 | y_bot = std::max(y_bot, other.y_bot); |
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111 | x_right = std::max(x_right, other.x_right); |
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112 | } |
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113 | }; |
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114 | |
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115 | struct AWT_command_data { |
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116 | /*! any kind of data which has to be stored between different events (e.g. to support drag&drop) |
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117 | * Purpose of this class is to allow to delete such data w/o knowing anything else. |
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118 | */ |
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119 | virtual ~AWT_command_data() {} |
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120 | }; |
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121 | |
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122 | enum CollapseMode { |
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123 | COLLAPSE_ALL = 0, |
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124 | EXPAND_MARKED = 1, // do not collapse groups containing marked species |
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125 | COLLAPSE_TERMINAL = 2, // do not collapse groups with subgroups |
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126 | EXPAND_ALL = 4, |
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127 | EXPAND_COLOR = 8, // do not collapse groups containing species with color == parameter 'color_group' (or any color if 'color_group' is -1) |
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128 | EXPAND_ZOMBIES = 16, // do not collapse groups containing zombies |
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129 | }; |
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130 | |
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131 | class AWT_graphic_tree : public AWT_graphic, virtual Noncopyable { |
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132 | char *species_name; |
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133 | AW::Position cursor; |
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134 | |
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135 | int baselinewidth; |
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136 | int show_brackets; |
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137 | int show_circle; |
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138 | int use_ellipse; |
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139 | float circle_zoom_factor; |
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140 | float circle_max_size; |
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141 | |
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142 | int zombies; // # of zombies during last load() |
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143 | int duplicates; // # of duplicates during last load() |
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144 | |
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145 | AW_pos paint_irs_sub_tree(AP_tree *node, AW_pos x_offset); // returns y pos |
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146 | |
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147 | void unload(); |
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148 | |
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149 | // variables - tree compatibility |
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150 | |
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151 | AP_tree * tree_proto; |
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152 | bool link_to_database; // link on load ? |
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153 | |
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154 | double list_tree_ruler_y; |
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155 | double irs_tree_ruler_scale_factor; |
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156 | |
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157 | AWT_scaled_font_limits scaled_font; |
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158 | double scaled_branch_distance; // vertical distance between branches (may be extra-scaled in options) |
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159 | |
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160 | AW_pos grey_level; |
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161 | |
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162 | AW_device *disp_device; // device for recursive functions |
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163 | |
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164 | const AW_bitset line_filter, vert_line_filter, mark_filter, group_bracket_filter, bs_circle_filter; |
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165 | const AW_bitset leaf_text_filter, group_text_filter, remark_text_filter, other_text_filter; |
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166 | const AW_bitset ruler_filter, root_filter; |
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167 | |
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168 | bool nds_show_all; |
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169 | |
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170 | AD_map_viewer_cb map_viewer_cb; |
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171 | AWT_command_data *cmd_data; |
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172 | |
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173 | void scale_text_koordinaten(AW_device *device, int gc, double& x, double& y, double orientation, int flag); |
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174 | |
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175 | // functions to compute displayinformation |
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176 | |
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177 | void show_dendrogram(AP_tree *at, AW::Position& pen, DendroSubtreeLimits& limits); |
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178 | |
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179 | void show_radial_tree(AP_tree *at, |
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180 | double x_center, |
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181 | double y_center, |
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182 | double tree_sprad, |
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183 | double tree_orientation, |
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184 | double x_root, |
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185 | double y_root); |
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186 | |
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187 | void show_nds_list(GBDATA * gb_main, bool use_nds); |
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188 | void show_irs_tree(AP_tree *at, double height); |
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189 | |
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190 | void box(int gc, const AW::Position& pos, int pixel_width, bool filled); |
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191 | void filled_box(int gc, const AW::Position& pos, int pixel_width) { box(gc, pos, pixel_width, true); } |
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192 | void empty_box(int gc, const AW::Position& pos, int pixel_width) { box(gc, pos, pixel_width, false); } |
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193 | void diamond(int gc, const AW::Position& pos, int pixel_width); |
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194 | |
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195 | const char *ruler_awar(const char *name); |
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196 | |
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197 | void set_line_attributes_for(AP_tree *at) const { |
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198 | disp_device->set_line_attributes(at->gr.gc, at->get_linewidth()+baselinewidth, AW_SOLID); |
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199 | } |
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200 | |
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201 | virtual void read_tree_settings(); |
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202 | void update_structure() { |
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203 | AP_tree *root = get_root_node(); |
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204 | if (root) root->compute_tree(); |
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205 | } |
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206 | void apply_zoom_settings_for_treetype(AWT_canvas *ntw); |
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207 | |
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208 | int draw_branch_line(int gc, const AW::Position& root, const AW::Position& leaf, AW_bitset filter) { |
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209 | const AW_click_cd *old = disp_device->get_click_cd(); |
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210 | td_assert(old && old->get_cd1() && !old->get_cd2()); // cd1 should be the node |
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211 | |
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212 | AW_click_cd branch(disp_device, old->get_cd1(), (AW_CL)"branch"); |
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213 | return disp_device->line(gc, root, leaf, filter); |
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214 | } |
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215 | |
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216 | bool warn_inappropriate_mode(AWT_COMMAND_MODE mode); |
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217 | |
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218 | protected: |
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219 | void store_command_data(AWT_command_data *new_cmd_data) { |
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220 | delete cmd_data; |
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221 | cmd_data = new_cmd_data; |
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222 | } |
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223 | AWT_command_data *get_command_data() { return cmd_data; } |
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224 | |
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225 | public: |
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226 | |
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227 | // *********** read only variables !!! |
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228 | |
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229 | AW_root *aw_root; |
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230 | AP_tree_display_type tree_sort; |
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231 | AP_tree *displayed_root; // root node of shown (sub-)tree; differs from real root if tree is zoomed logically |
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232 | AP_tree_root *tree_static; |
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233 | GBDATA *gb_main; |
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234 | |
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235 | // *********** public section |
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236 | |
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237 | AWT_graphic_tree(AW_root *aw_root, GBDATA *gb_main, AD_map_viewer_cb map_viewer_cb); |
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238 | ~AWT_graphic_tree() OVERRIDE; |
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239 | |
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240 | AP_tree *get_root_node() { return tree_static ? tree_static->get_root_node() : NULL; } |
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241 | bool is_logically_zoomed() { return displayed_root != get_root_node(); } |
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242 | |
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243 | void init(RootedTreeNodeFactory *nodeMaker_, AliView *aliview, AP_sequence *seq_prototype, bool link_to_database_, bool insert_delete_cbs); |
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244 | AW_gc_manager init_devices(AW_window *, AW_device *, AWT_canvas *ntw) OVERRIDE; |
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245 | |
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246 | void show(AW_device *device) OVERRIDE; |
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247 | const AW::Position& get_cursor() const { return cursor; } |
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248 | |
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249 | void info(AW_device *device, AW_pos x, AW_pos y, AW_clicked_line *cl, AW_clicked_text *ct) OVERRIDE; |
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250 | |
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251 | private: |
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252 | void handle_key(AW_device *device, AWT_graphic_event& event); |
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253 | public: |
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254 | void handle_command(AW_device *device, AWT_graphic_event& event) OVERRIDE; |
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255 | |
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256 | void mark_species_in_tree(AP_tree *at, int mark); |
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257 | void mark_species_in_tree_that(AP_tree *at, int mark, int (*condition)(GBDATA*, void*), void *cd); |
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258 | |
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259 | void mark_species_in_rest_of_tree(AP_tree *at, int mark); |
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260 | void mark_species_in_rest_of_tree_that(AP_tree *at, int mark, int (*condition)(GBDATA*, void*), void *cd); |
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261 | |
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262 | bool tree_has_marks(AP_tree *at); |
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263 | bool rest_tree_has_marks(AP_tree *at); |
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264 | |
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265 | void detect_group_state(AP_tree *at, AWT_graphic_tree_group_state *state, AP_tree *skip_this_son); |
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266 | |
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267 | bool group_tree(AP_tree *at, CollapseMode mode, int color_group); |
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268 | void group_rest_tree(AP_tree *at, CollapseMode mode, int color_group); |
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269 | void reorder_tree(TreeOrder mode); |
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270 | GB_ERROR create_group(AP_tree * at) __ATTR__USERESULT; |
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271 | void toggle_group(AP_tree * at); |
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272 | GB_ERROR load(GBDATA *gb_main, const char *name, AW_CL, AW_CL) OVERRIDE __ATTR__USERESULT; |
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273 | GB_ERROR save(GBDATA *gb_main, const char *name, AW_CL cd1, AW_CL cd2) OVERRIDE __ATTR__USERESULT; |
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274 | int check_update(GBDATA *gb_main) OVERRIDE; // reload tree if needed |
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275 | void update(GBDATA *gb_main) OVERRIDE; |
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276 | void set_tree_type(AP_tree_display_type type, AWT_canvas *ntw); |
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277 | |
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278 | double get_irs_tree_ruler_scale_factor() const { return irs_tree_ruler_scale_factor; } |
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279 | void show_ruler(AW_device *device, int gc); |
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280 | void get_zombies_and_duplicates(int& zomb, int& dups) const { zomb = zombies; dups = duplicates; } |
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281 | |
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282 | #if defined(UNIT_TESTS) // UT_DIFF |
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283 | friend class fake_AWT_graphic_tree; |
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284 | #endif |
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285 | }; |
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286 | |
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287 | class ClickedTarget { |
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288 | /*! Represents any target corresponding to some (mouse-)position in the tree display. |
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289 | * |
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290 | * The target is e.g. used as target for keystrokes or mouse clicks. |
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291 | * |
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292 | * For AP_LIST_NDS, this only represents the species (w/o any tree information). |
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293 | * For other tree display modes, this represents a specific tree node. |
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294 | * |
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295 | * The space outside the tree does represent the whole tree (aka the root-node). |
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296 | * (the necessary distance to the tree-structure/-text is defined by AWT_CATCH) |
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297 | */ |
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298 | |
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299 | AP_tree *tree_node; |
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300 | GBDATA *gb_species; |
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301 | bool ruler; |
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302 | bool branch; |
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303 | |
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304 | const AW_clicked_element *elem; |
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305 | |
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306 | void init() { |
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307 | tree_node = NULL; |
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308 | gb_species = NULL; |
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309 | ruler = false; |
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310 | branch = false; |
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311 | } |
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312 | |
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313 | void identify(AWT_graphic_tree *agt) { |
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314 | init(); |
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315 | if (elem && elem->exists) { |
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316 | const char *what = (const char*)elem->cd2(); |
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317 | |
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318 | if (what) { |
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319 | if (strcmp(what, "species") == 0) { // entry in NDS list |
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320 | gb_species = (GBDATA*)elem->cd1(); |
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321 | td_assert(gb_species); |
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322 | } |
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323 | else if (strcmp(what, "ruler") == 0) { |
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324 | ruler = !elem->cd1(); |
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325 | } |
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326 | else if (strcmp(what, "branch") == 0) { |
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327 | branch = true; // indicates that a line really IS the branch (opposed to other branch-related lines like e.g. group-brackets) |
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328 | } |
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329 | else { |
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330 | td_assert(0); // unknown element type |
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331 | } |
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332 | } |
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333 | |
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334 | if (!(gb_species || ruler)) { |
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335 | tree_node = (AP_tree*)elem->cd1(); |
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336 | td_assert(branch || !what); |
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337 | } |
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338 | } |
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339 | else { // use whole tree if mouse does not point to a subtree |
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340 | tree_node = agt ? agt->get_root_node() : NULL; |
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341 | } |
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342 | td_assert(implicated(branch, tree_node)); |
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343 | } |
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344 | |
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345 | public: |
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346 | |
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347 | ClickedTarget(AWT_graphic_tree *agt, const AW_clicked_element *clicked) : elem(clicked) { |
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348 | // uses root of tree as target, when a position outside of the tree is selected |
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349 | // (e.g. used for key-commands) |
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350 | identify(agt); |
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351 | } |
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352 | ClickedTarget(const AW_clicked_element *clicked) : elem(clicked) { |
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353 | // accept only normal branches as targets |
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354 | identify(NULL); |
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355 | } |
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356 | |
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357 | const AW_clicked_element *element() const { return elem; } |
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358 | AP_tree *node() const { return tree_node; } |
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359 | GBDATA *species() const { return gb_species; } |
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360 | |
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361 | bool is_text() const { return elem && elem->is_text(); } |
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362 | bool is_line() const { return elem && elem->is_line(); } |
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363 | bool is_branch() const { return branch; } |
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364 | bool is_ruler() const { return ruler; } |
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365 | |
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366 | double get_rel_attach() const { |
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367 | // return [0..1] according to exact position where element is dropped |
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368 | if (is_line() && (is_branch() || ruler)) return elem->get_rel_pos(); |
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369 | return 0.5; // act like "drop on branch-center" |
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370 | } |
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371 | }; |
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372 | |
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373 | AWT_graphic_tree *NT_generate_tree(AW_root *root, GBDATA *gb_main, AD_map_viewer_cb map_viewer_cb); |
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374 | bool AWT_show_branch_remark(AW_device *device, const char *remark_branch, bool is_leaf, AW_pos x, AW_pos y, AW_pos alignment, AW_bitset filteri); |
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375 | void TREE_insert_jump_option_menu(AW_window *aws, const char *label, const char *awar_name); |
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376 | |
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377 | #else |
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378 | #error TreeDisplay.hxx included twice |
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379 | #endif // TREEDISPLAY_HXX |
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