source: branches/profile/STAT/st_window.hxx

Last change on this file was 12101, checked in by westram, 10 years ago
  • chimera check
    • renamed code, help, fig, macro id (to distinguish from 'sequence quality tool')
    • try to document how it works
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 1.5 KB
Line 
1// =========================================================== //
2//                                                             //
3//   File      : st_window.hxx                                 //
4//   Purpose   :                                               //
5//                                                             //
6//   Institute of Microbiology (Technical University Munich)   //
7//   http://www.arb-home.de/                                   //
8//                                                             //
9// =========================================================== //
10
11#ifndef ST_WINDOW_HXX
12#define ST_WINDOW_HXX
13
14#ifndef AW_WINDOW_HXX
15#include <aw_window.hxx>
16#endif
17
18class ST_ML;
19class AP_tree;
20
21void       STAT_set_postcalc_callback(ST_ML *st_ml, AW_CB0 postcalc_cb, AW_window *cb_win);
22AW_window *STAT_create_main_window(AW_root *aw_root, ST_ML *st_ml);
23ST_ML     *STAT_create_ST_ML(GBDATA *gb_main);
24
25typedef unsigned char ST_ML_Color;
26enum st_report_enum {
27    ST_QUALITY_REPORT_NONE,
28    ST_QUALITY_REPORT_TEMP,
29    ST_QUALITY_REPORT_YES
30};
31
32AP_tree     *STAT_find_node_by_name(ST_ML *st_ml, const char *species_name);
33ST_ML_Color *STAT_get_color_string(ST_ML *st_ml, char *species_name, AP_tree *node, int start_ali_pos, int end_ali_pos);
34bool         STAT_update_ml_likelihood(ST_ML *st_ml, char *result[4], int& latest_update, const char *species_name, AP_tree *node);
35AW_window   *STAT_create_chimera_check_window(AW_root *aw_root, GBDATA *gb_main);
36
37
38#else
39#error st_window.hxx included twice
40#endif // ST_WINDOW_HXX
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