1 | /*ARBDB ASCII*/ |
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2 | genom_db %i 0 |
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3 | presets %% (% |
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4 | alignment :6000 %% (% |
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5 | alignment_name :7600 "ali_mini" |
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6 | alignment_len :7000 %i 187 |
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7 | aligned :7000 %i 1 |
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8 | alignment_write_security :7600 %i 0 |
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9 | alignment_type :7000 "rna" |
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10 | auto_format %i 0 |
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11 | alignment_rem "<NONE>" |
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12 | %) /*alignment*/ |
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13 | |
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14 | key_data %% (% |
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15 | key %% (% |
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16 | key_name "name" |
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17 | key_type %i 12 |
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18 | key_hidden %i 0 |
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19 | %) /*key*/ |
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20 | |
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21 | key %% (% |
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22 | key_name "acc" |
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23 | key_type %i 12 |
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24 | key_hidden %i 0 |
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25 | %) /*key*/ |
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26 | |
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27 | key %% (% |
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28 | key_name "ali_mini" |
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29 | key_type %i 15 |
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30 | key_hidden %i 0 |
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31 | %) /*key*/ |
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32 | |
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33 | key %% (% |
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34 | key_name "ali_mini/data" |
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35 | key_type %i 12 |
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36 | key_hidden %i 0 |
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37 | %) /*key*/ |
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38 | |
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39 | %) /*key_data*/ |
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40 | |
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41 | use "ali_mini" |
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42 | %) /*presets*/ |
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43 | |
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44 | species_data %% (% |
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45 | species %% (% |
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46 | name :7600 "BcSSSS00" |
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47 | ali_mini %% (% |
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48 | data :7000 "UUUAUCGGAGAGUUUGAUCAAGUCGAGCGG--ACAGA----U--GGGAGCUUGCUCCC-------UGAU--GUUAGCGGC-GGACGGACUCCGGGAAACCGGGGCUAAUACCGGAUGGU-GAUGAUUGGGGUGAAGUCGUAACAA-GGUAGCCGUAUCGGAAGGUGCGGCUGGAUCACCUCCUUUCU" |
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49 | %) /*ali_mini*/ |
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50 | |
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51 | acc "ARB_2CA9F764" |
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52 | %) /*species*/ |
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53 | |
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54 | species %% (% |
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55 | name :7600 "Bl0LLL00" |
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56 | ali_mini %% (% |
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57 | data :7000 "........AGAGUUUGAUCAAGUCGAGCGG--ACCGA----C--GGGAGCUUGCUCCC-------UUAG--GUCAGCGGC-GGACGGACUCCGGGAAACCGGGGCUAAUACCGGAUGCU-GAUGAUUGGGGUGAAGUCGUAACAA-GGUAGCCGUAUCGGAAGGUGCGGCUGGAUC..........." |
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58 | %) /*ali_mini*/ |
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59 | |
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60 | acc "ARB_6B04C30A" |
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61 | %) /*species*/ |
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62 | |
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63 | species %% (% |
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64 | name :7600 "ClnCorin" |
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65 | ali_mini %% (% |
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66 | data :7000 ".........GAGUUUGAUCAAGUCGAG-------CGA----U--GAAGUUCCUUCGGGA------AUGG--AUUAGCGGC-GGACGGGCCUUUCGAAAGGAAGAUUAAUACCGCAUAAG-ACAGCGAUUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGAGAACCUU--GCCUGGCUGGAUCAUC.." |
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67 | %) /*ali_mini*/ |
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68 | |
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69 | acc "ARB_CEB24FD3" |
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70 | %) /*species*/ |
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71 | |
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72 | species %% (% |
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73 | name :7600 "CltBotul" |
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74 | ali_mini %% (% |
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75 | data :7000 "................AUCAAGUCGAG-------CGA----U--GAAGCUUCUUCGGAA------GUGG--AUUAGCGGC-GGACGGGCCUUUCGAAAGGAAGAUUAAUACCUCAUAAG-ACAGCGAUUGGGGUGAAGUCGUAACAG---------------G--U------------------U.." |
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76 | %) /*ali_mini*/ |
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77 | |
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78 | acc "ARB_4FCDD74F" |
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79 | %) /*species*/ |
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80 | |
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81 | species %% (% |
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82 | name :7600 "CPPParap" |
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83 | ali_mini %% (% |
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84 | data :7000 "NNNNNNGA-GAGUUUGAUCAAGUCGAG-------CGA----U--GAAGUUCCUUCGGGA------ACGG--AUUAGCGGC-GGACGGGCCUUCCGAAAGGAAGAUUAAUACCGCAUAAGAUCAGCGAUUGGGGU-AAGUCGUAACAAGGUAGCCGUAGGAGAACCUGCGGNUGGAUCACCUCCUU.." |
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85 | %) /*ali_mini*/ |
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86 | |
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87 | acc "ARB_CF69AC5C" |
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88 | %) /*species*/ |
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89 | |
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90 | species %% (% |
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91 | name :7600 "ClfPerfr" |
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92 | ali_mini %% (% |
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93 | data :7000 "-AAAUUGA-GAGUUUGAUCAAGUCGAG-------CGA----U--GAAGUUUCCUUCGGGAA----ACGG--AUUAGCGGCGGGACGGGCCUUCAGAACCUGCGGCUGGAUCAUCAUAAUGCAGCGAUUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGCGAAAGGAAGAUUAAUACCCCUCCUUUCU" |
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94 | %) /*ali_mini*/ |
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95 | |
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96 | acc "ARB_5BEE4C92" |
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97 | %) /*species*/ |
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98 | |
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99 | species %% (% |
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100 | name :7600 "DlcTolu2" |
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101 | ali_mini %% (% |
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102 | data :7000 "........AGAGUUUGAUCAAGUCGAACGA--G-AA-----AGGGAUUGCUUGCAAUCCU------GAG--UAGAGUGGC-GCACGGACUGCCCGAAAGGACAGCUAAUACCGGAUGAA-GAUAAUUGGGGUGAAGUCGUAACAA-GGUAGCCGUUGAGGAAUCAGCGGCUGGAUCACCUCCUUNNN" |
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103 | %) /*ali_mini*/ |
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104 | |
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105 | acc "ARB_815E94DB" |
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106 | %) /*species*/ |
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107 | |
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108 | species %% (% |
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109 | name :7600 "PbcAcet2" |
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110 | ali_mini %% (% |
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111 | data :7000 "........AGAGUUUGAUCAAGUCGAACGU--G-AA-----A--GGGACUUCGGUCCU--------GAG--UAAAGUGGC-GCACGGACACUUCGAAAGGGGUGCUAAUACCGGAUAAG-GGUAACUGGGGUGAAGUCGUAACAA-GGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUUUNN" |
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112 | %) /*ali_mini*/ |
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113 | |
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114 | acc "ARB_CC2D184F" |
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115 | %) /*species*/ |
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116 | |
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117 | species %% (% |
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118 | name :7600 "PbrPropi" |
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119 | ali_mini %% (% |
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120 | data :7000 "........AGAGUUUGAUCAAGUCGAACGG--G-AUU----A--AGGGGCUUGCUCCU--------UAA--UCUAGUGGC-GCACGGACACUUCGAAAGAGGUGCUAAUACCUGAUAAG-GGUGACUGGGGUGAAGUCGUAACAA-GGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUUUNN" |
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121 | %) /*ali_mini*/ |
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122 | |
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123 | acc "ARB_2B59EE6C" |
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124 | %) /*species*/ |
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125 | |
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126 | species %% (% |
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127 | name :7600 "Stsssola" |
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128 | ali_mini %% (% |
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129 | data :7000 "AAACUGG-AGAGUUUGAUCAAGUCGAACGU--G-AA-----A-----GUCUUCGGGAU--------GAG--UAAAGUGGC-GCACGGACGGCUGGAAACGGUCGCUAAUACCGGAUAAC-AAUGAUUGGGGUGAAGUCGUAACAA-GGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUUU.." |
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130 | %) /*ali_mini*/ |
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131 | |
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132 | acc "ARB_219182CE" |
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133 | %) /*species*/ |
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134 | |
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135 | species %% (% |
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136 | name :7600 "DsssDesu" |
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137 | ali_mini %% (% |
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138 | data :7000 "-AACUGG-AGAGUUUGAUCAAGUCGUACGA--G-AA-----AGGGG----CUUCGGCCCU------GAG--UAGAGUGGC-GCACGGACUCUGCGAAAGUGGAGCUAAUACCGGAUACA-G--------------A--------------------------------------------------G" |
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139 | %) /*ali_mini*/ |
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140 | |
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141 | acc "ARB_2F95EE99" |
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142 | %) /*species*/ |
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143 | |
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144 | species %% (% |
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145 | name :7600 "LgtLytic" |
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146 | ali_mini %% (% |
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147 | data :7000 "........AGAGUUUGAUCAAGUCGAACGGCAG-CACAGUCU--AGCUUGCUAGACGG--------GUG--GCGAGUGGC-GAACGGACUUGGGGAAACUCAAGCUAAUACCGCAUAAU-CAUGACUGGGGUGAAGUCGUAACAA-GGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUN..." |
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148 | %) /*ali_mini*/ |
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149 | |
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150 | acc "ARB_470564F9" |
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151 | %) /*species*/ |
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152 | |
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153 | species %% (% |
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154 | name :7600 "DcdNodos" |
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155 | ali_mini %% (% |
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156 | data :7000 "......AACUGAAGAGUUUGAUCAAGUCGAACGGGGUUAUGU----AGCUUGCUAUGUAA-----------CCUAGUGGC-GGACGGACGUAUGGAAACGUACGCUAAUACCGCAUAAG-GAUGACUGGGGUGAAGUCGUAACAA-GGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUU.." |
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157 | %) /*ali_mini*/ |
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158 | |
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159 | acc "ARB_30B40050" |
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160 | %) /*species*/ |
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161 | |
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162 | species %% (% |
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163 | name :7600 "FrhhPhil" |
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164 | ali_mini %% (% |
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165 | data :7000 "UUG-----AAGAGUUGAUCAAGUCGAACGG--U-AA-----C--AGGUCUUCGGAUGC--------UGA--CGA-GUGGC-GGACGGCCAGUUGGAAACGACUGUUAAUACCGCAUAAU-CAUGACUGGGGUGAAGUCGUAACAAUGGUAGCCGUA-GGGAACCUGCGGCUGGAUCACCUCCUU..." |
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166 | %) /*ali_mini*/ |
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167 | |
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168 | acc "ARB_948948A3" |
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169 | %) /*species*/ |
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170 | |
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171 | species %% (% |
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172 | name :7600 "PsAAAA00" |
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173 | ali_mini %% (% |
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174 | data :7000 "N-----UACUGAAGAGUUUGAUCAAGUCGAGCGGAUG---AAGGG-AGCUUGCUCCUGGAUUC--------A---GCGGC-GGACGGACGUCCGGAAACGGGCGCUAAUACCGCAUACG-CAU------G--G------UAACAA-GG------------AA----C---C------------UG.." |
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175 | %) /*ali_mini*/ |
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176 | |
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177 | acc "ARB_AEBB7869" |
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178 | %) /*species*/ |
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179 | |
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180 | species %% (% |
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181 | name :7600 "PslFlave" |
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182 | ali_mini %% (% |
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183 | data :7000 "........AGAGUUUGAUCAAGUCGAGCGGU...AGGGG-----AGCUUGCUCCCUGA--------UUC-----AGCGGC-GGACGGACGUUUCGAAAGGAACGCUAAUACCGCAUACG-CAUGACUGGGGUGAAGUCGUAACAA-GGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCU...." |
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184 | %) /*ali_mini*/ |
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185 | |
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186 | acc "ARB_1763CF6" |
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187 | %) /*species*/ |
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188 | |
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189 | species %% (% |
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190 | name :7600 "HllHalod" |
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191 | ali_mini %% (% |
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192 | data :7000 "........AGAGUUUGAUCAAGUCGAGCGG--A-AACGAUGG--AAGCUUGCUUCCAG--------GCG--UCGAGCGGC-GGACGGACCUGGGGAAACUCAGGCUAAUACCGCAUACG-CAUGACUGGGGUGAAGUCGUAACAA-GGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUU..." |
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193 | %) /*ali_mini*/ |
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194 | |
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195 | acc "ARB_2180C521" |
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196 | %) /*species*/ |
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197 | |
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198 | species %% (% |
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199 | name :7600 "VbrFurni" |
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200 | ali_mini %% (% |
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201 | data :7000 "........AGAGUUUGAUCAAGUCGAGCGG--C-AGCGACA-ACAUUGAACCUUCGGGGGAUUUGUUGGGCGGCGAGCGGCGGACGGACCAUUGGAAACGAUGGCUAAUACCGCAUGAU-CAUGACUGGGGUGAAGUCGUAACAA-GGUAGCGCUAGGGGAACCUGGCGCUGGAUCACCUCCUUU.." |
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202 | %) /*ali_mini*/ |
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203 | |
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204 | acc "ARB_4C6C9E8C" |
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205 | %) /*species*/ |
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206 | |
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207 | species %% (% |
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208 | name :7600 "VblVulni" |
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209 | ali_mini %% (% |
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210 | data :7000 "........AGAGUUUGAUCAAGUCGAGCGG--C-AGC-----ACAGAGAAACUUG------UUUCUCGGGUGGCGAGCGGCGGACGGACCAUUGGAAACGAUGGCUAAUACCGCAUGAU-CAUGACUGGGGUGAAGUCGUAACAA-GGUAGCGCUAGGGGAACCUGGCGCUGGAUCACCUCCUUU.." |
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211 | %) /*ali_mini*/ |
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212 | |
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213 | acc "ARB_4E1D58F9" |
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214 | %) /*species*/ |
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215 | |
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216 | species %% (% |
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217 | name :7600 "VbhChole" |
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218 | ali_mini %% (% |
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219 | data :7000 "........AGAGUUUGAUCAAGUCGAGCGG--C-AGC-----ACAGAGGAACUUG------UUCCUUGGGUGGCGAGCGGCGGACGGACCAUUGGAAACGAUGGCUAAUACCGCAUAAC-CAUGACUGGGGUGAAGUCGUAACAA-GGUAGCGCUAGGGGAACCUGGCGCUGGAUCACCUCCUUU.." |
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220 | %) /*ali_mini*/ |
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221 | |
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222 | acc "ARB_FD102EA4" |
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223 | %) /*species*/ |
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224 | |
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225 | species %% (% |
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226 | name :7600 "AclPleur" |
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227 | ali_mini %% (% |
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228 | data :7000 "UG----AAUUGAAGAGUUUGAUCAAGUCGAACGGUAACGGGAAGGGAGCUUGCUUUCUUUGCCG-------ACGAGUGGC-GGACGGACUACGGGAAACUGUAGCUAAUACCGCGUAAU-CAUGACUGGGGUGAAGUCGUAGCAA-GGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA.." |
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229 | %) /*ali_mini*/ |
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230 | |
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231 | acc "ARB_9E1D1B16" |
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232 | %) /*species*/ |
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233 | |
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234 | species %% (% |
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235 | name :7600 "PtVVVulg" |
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236 | ali_mini %% (% |
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237 | data :7000 "U-----AAUUGAAGAGUUUGAUCAAGUCGAGCGGU...AGGAGAA-AGCUUGCUUUCUUGCUG--------ACGAGCGGC-GGACGGACUACUGGAAACGGUGGCUAAUACCGCAUGAC-CAUGACUGGGGUGAAGUCGUAACAA-GGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA.." |
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238 | %) /*ali_mini*/ |
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239 | |
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240 | acc "ARB_ED8B86F" |
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241 | %) /*species*/ |
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242 | |
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243 | %) /*species_data*/ |
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244 | |
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245 | extended_data :7000 %% (% |
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246 | extended %% (% |
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247 | name :7000 "ECOLI" |
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248 | acc "J01695" |
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249 | full_name "Escherichia coli" |
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250 | ali_mini %% (% |
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251 | data :7000 ".AAAUUGAAGAGUUUGAUCAUG----UCGAGCGGGCGGAACACAUGCAAAGCUUGCUUCUUUGCG------ACGAGUGGC-GGACGGGUGAGGGGAAACGGUAGCUAAUACCGCAUAAC-GAUGACUAAAGUUAAUACCUAUUGA-CGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAG.." |
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252 | %) /*ali_mini*/ |
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253 | |
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254 | %) /*extended*/ |
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255 | |
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256 | %) /*extended_data*/ |
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257 | |
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