source: branches/properties

Name Size Rev Age Author Last Change
../
AISC ​ 18730   3 years westram * remove trailing whitespace from c source.
AISC_COM ​ 18731   3 years westram * remove generated whitespace. - code generator depended on …
AISC_MKPTPS ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
ARB_GDE ​ 19432   17 months westram * GBT_get_alignment_len - now also reports error if …
ARBDB ​ 19437   17 months westram * fix bogus warning […]
AWT ​ 19497   7 months westram * hardcode defaults for AWAR_DIST_CORR_TRANS and …
AWTC ​ 19339   2 years westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
AWTI ​ 19365   18 months westram * string splitters: - unittests for GBT_split_string: …
bin ​ 19355   2 years westram * adds script to detect new field content in marked subset of species …
BINDEP ​ 18437   5 years westram * reintegrates 'io' into 'trunk' * adds: log:branches/io@18428:18436
BINDINGS ​ 18729   3 years westram * eliminate trailing whitespace from Makefiles.
BUGEX ​ 18730   3 years westram * remove trailing whitespace from c source.
CONSENSUS_TREE ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CONVERTALN ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CORE ​ 19430   17 months westram * un-inline CharPtrArray::remove to get rid of vectorizer …
DBSERVER ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
DIST ​ 19497   7 months westram * hardcode defaults for AWAR_DIST_CORR_TRANS and …
doc ​ 6141   15 years westram * spellchecked all (phew)
EDIT4 ​ 19495   8 months westram * rename aw_file_selection → aw_modal_file_selection to …
EISPACK ​ 18730   3 years westram * remove trailing whitespace from c source.
etc ​ 6141   15 years westram * spellchecked all (phew)
GDE ​ 19480   16 months westram * reintegrates 'gde' into 'trunk' * adds: log:branches/gde@19460:19479
GDEHELP ​ 19234   2 years westram * reintegrates 'gde' into 'trunk' * adds: log:branches/gde@19228:19233
GENOM ​ 19365   18 months westram * string splitters: - unittests for GBT_split_string: …
GENOM_IMPORT ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
GFX ​ 12766   10 years epruesse attempt at building an icon for ARB databases
GL ​ 19447   16 months westram * suppression of warnings for source-subtrees: - comment + warn …
HEADERLIBS ​ 18634   4 years westram * reintegrates 'root' into 'trunk' - implements #449 * adds: …
HELP_SOURCE ​ 19489   15 months westram * reintegrates 'macros' into 'trunk' * implements #856 * adds: …
ISLAND_HOPPING ​ 19448   16 months westram * enable + fix warnings in ISLAND_HOPPING.
lib ​ 19498   7 months westram * remove from all defaults: - font (xfig-scale; kept in EDIT4 as …
MERGE ​ 19365   18 months westram * string splitters: - unittests for GBT_split_string: …
MULTI_PROBE ​ 19365   18 months westram * string splitters: - unittests for GBT_split_string: …
NALIGNER ​ 19393   18 months westram * reintegrates 'ali' into 'trunk' - refactored misused enum - …
NAMES ​ 18730   3 years westram * remove trailing whitespace from c source.
NAMES_COM ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
NTREE ​ 19432   17 months westram * GBT_get_alignment_len - now also reports error if …
PARSIMONY ​ 19248   2 years westram * rename GBT_add_new_changekey → …
PERL2ARB ​ 19493   12 months westram * homebrew build looked for wrong lib-suffix. patch from jan. thx :) …
PERL_SCRIPTS ​ 19355   2 years westram * adds script to detect new field content in marked subset of species …
PERLTOOLS ​ 19445   16 months westram * check all A_CC calls (=plain C compilations) whether they are used.
PHYLO ​ 19206   2 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PRIMER_DESIGN ​ 19206   2 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PROBE ​ 19431   17 months westram * fix NDEBUG warnings (gcc 10.2) - by simplifying …
PROBE_COM ​ 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
PROBE_DESIGN ​ 19365   18 months westram * string splitters: - unittests for GBT_split_string: …
PROBE_SET ​ 18730   3 years westram * remove trailing whitespace from c source.
READSEQ ​ 19452   16 months westram * get rid of tmpnam().
RNA3D ​ 19206   2 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
RNACMA ​ 19432   17 months westram * GBT_get_alignment_len - now also reports error if …
SECEDIT ​ 19432   17 months westram * GBT_get_alignment_len - now also reports error if …
SEQ_QUALITY ​ 19425   17 months westram * reintegrates 'ali' into 'trunk' - refactorings + fixes related …
SERVERCNTRL ​ 19297   2 years westram * reintegrates 'refactor' into 'trunk' - refactored MULTI_PROBE to …
SH ​ 19494   10 months westram * collection of sysinfo terminated with error - caused by …
SL ​ 19489   15 months westram * reintegrates 'macros' into 'trunk' * implements #856 * adds: …
SOURCE_TOOLS ​ 19449   16 months westram * shadow-location does appear as warning AND note (depending on gcc …
STAT ​ 19432   17 months westram * GBT_get_alignment_len - now also reports error if …
TEMPLATES ​ 19444   16 months westram * add header (fixes previous commit)
TOOLS ​ 19446   16 months westram * introduce onlyC_flags - flags used for C compilation only. …
TREEGEN ​ 19446   16 months westram * introduce onlyC_flags - flags used for C compilation only. …
UNIT_TESTER ​ 19433   17 months westram * accept duplicate symbols (i.e. symbols with multiple definition …
util ​ 19441   17 months westram * provide source etc. by debian11 buildhost.
WETC ​ 19489   15 months westram * reintegrates 'macros' into 'trunk' * implements #856 * adds: …
WINDOW ​ 19495   8 months westram * rename aw_file_selection → aw_modal_file_selection to …
XML ​ 18725   3 years westram * rename CPP_OBJECTS → OBJECTS.
.gitignore 429 bytes ​ 19245   2 years westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
arb_CHANGES.txt 26.7 KB ​ 19393   18 months westram * reintegrates 'ali' into 'trunk' - refactored misused enum - …
arb_install.sh 20.7 KB ​ 19266   2 years westram * replace realpath locally in install script - cannot use …
arb_INSTALL.txt 6.0 KB ​ 19492   12 months westram * mention libgomp1 (required by FastTreeMP)
arb_LICENSE.txt 11.0 KB ​ 18697   3 years westram * full update from child 'stable' into 'trunk' - merge changes …
arb_OS_X.txt 5.3 KB ​ 18781   3 years westram * reintegrates 'help' into 'trunk' - relocate help sources * …
arb_OS_X_MacPorts.txt 370 bytes ​ 6288   15 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_PUBLIB_LICENSE.txt 2.2 KB ​ 15367   8 years epruesse revert … misunderstood the meaning of the file name …
arb_README.txt 7.1 KB ​ 18735   3 years westram * fix another obsolete URL
arb_UBUNTU.txt 1.1 KB ​ 19428   17 months westram * add dependencies to make + time. * call apt-get …
arbsrc_README.txt 210 bytes ​ 6288   15 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.0 KB ​ 16649   7 years westram * partial merge from 'gcc' into 'trunk' - handles #770 by reducing …
config.makefile.template 1.9 KB ​ 19245   2 years westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
demo.arb 102.1 KB ​ 16239   7 years westram * change default tree back to first tree
Doxyfile 104.7 KB ​ 17645   6 years westram update doxygen docs: - updated obsolete setting using "doxygen -u". - …
Makefile 87.6 KB ​ 19446   16 months westram * introduce onlyC_flags - flags used for C compilation only. …
README 28 bytes ​ 18702   3 years westram * full update from child 'stable' into 'trunk' * adds: …
  • Property svn:ignore set to
    *.last_gcc
    ARB_SOURCE_DOC
    ChangeLog
    INCLUDE
    PERL5
    arb.tgz
    arbsrc.lst
    arbsrc_*.tgz
    compile.log
    config.makefile
    do_core
    TAGS
    .cdtproject
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    *.bak
    arb_time.log
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    makeloc.here
    nbproject
    *.last_compiler
    TAGS*.tmp
    .git
    current.patch
    staged.patch
    unstaged.patch
    build.log
    arb-sina-fat.tgz
  • Property svn:mergeinfo set to (toggle deleted branches)
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