| 1 | #ifndef AW_AWAR_DEFS_HXX |
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| 2 | #define AW_AWAR_DEFS_HXX |
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| 3 | |
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| 4 | #define AWAR_DBBASE "tmp/nt/arbdb" |
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| 5 | #define AWAR_DB_PATH AWAR_DBBASE "/file_name" |
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| 6 | #define AWAR_DB_NAME AWAR_DB_PATH "_without_path" // awar is automatically updated when AWAR_DB_PATH changes |
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| 7 | |
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| 8 | #define AWAR_DEFAULT_ALIGNMENT "presets/use" // has to match ../ARBDB/arbdb.h@GB_DEFAULT_ALIGNMENT |
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| 9 | |
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| 10 | #define AWAR_TREE "focus/tree_name" |
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| 11 | #define AWAR_TREE_REFRESH "tmp/focus/tree_refresh" // touch this awar to refresh the tree display |
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| 12 | #define AWAR_TREE_RECOMPUTE "tmp/focus/tree_recompute" // touch this awar to recompute the tree (does refresh as well) |
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| 13 | |
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| 14 | #define AWAR_SECURITY_LEVEL "tmp/etc/security_level" |
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| 15 | |
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| 16 | #define AWAR_GDE_EXPORT_FILTER "tmp/gde/export_filter" |
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| 17 | #define AWAR_GDE_FILTER "tmp/gde/filter" |
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| 18 | |
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| 19 | #define AWAR_DB_COMMENT "description" |
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| 20 | |
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| 21 | #define AWAR_PT_SERVER "nt/pt_server" |
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| 22 | #define AWAR_TARGET_STRING "nt/target_string" |
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| 23 | #define AWAR_PRIMER_TARGET_STRING "nt/primer_target_string" |
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| 24 | #define AWAR_GENE_CONTENT "nt/gene_content" |
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| 25 | #define AWAR_MAX_MISMATCHES "nt/max_mismatches" |
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| 26 | #define AWAR_EXPERT "nt/expert" |
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| 27 | |
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| 28 | #define AWAR_SAI_COLOR_STR "tmp/sai_color_str" // to visualize SAIs in probe Match window |
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| 29 | |
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| 30 | // local awars for edit and edit4: |
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| 31 | |
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| 32 | #define AWAR_SPECIES_NAME_LOCAL "tmp/edit/species_name" // string: name of selected species |
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| 33 | #define AWAR_CURSOR_POSITION_LOCAL "tmp/edit/cursor_position" // int: position in sequence [0..N-1] |
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| 34 | |
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| 35 | // global awars |
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| 36 | |
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| 37 | #define AWAR_CURSOR_POSITION "tmp/focus/cursor_position" // int: position in sequence range = [1;len] |
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| 38 | #define AWAR_SET_CURSOR_POSITION "tmp/focus/set_cursor_position" // int: set position in sequence (remote control for ARB_EDIT4) range = [0;len-1] |
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| 39 | #define AWAR_RANGE "tmp/focus/range" // int-int: last highlighted range in any EDIT4. allowed values = [1;len] |
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| 40 | |
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| 41 | #define AWAR_SPECIES_NAME "tmp/focus/species_name" // string: name of selected species |
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| 42 | #define AWAR_INFO_BUTTON_TEXT "tmp/focus/info_button_text" // string: to display selected species |
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| 43 | #define AWAR_ORGANISM_NAME "tmp/focus/organism_name" // string: name of selected organism (differs from AWAR_SPECIES_NAME only for pseudo-gene-species) |
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| 44 | /* - normally AWAR_ORGANISM_NAME contains the same value as AWAR_SPECIES_NAME |
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| 45 | - if AWAR_SPECIES_NAME contains the name of a pseudo gene-species then AWAR_ORGANISM_NAME |
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| 46 | contains the name of the species the pseudo gene-species originated from */ |
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| 47 | // #define AWAR_EXPERIMENT_NAME "tmp/focus/experiment_name" // string : name of selected experiment |
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| 48 | #define AWAR_SAI_NAME "tmp/focus/sai_name" // string : name of selected SAI (e.g. in EDIT4 and 'Manage SAI') |
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| 49 | #define AWAR_SAI_GLOBAL "tmp/focus/sai_global" // string : name of selected SAI in EDIT4/Visualize SAI Tool - used in RNA3D Tool |
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| 50 | |
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| 51 | #define AWAR_HELIX_NAME "tmp/focus/helix_name" // string: name of selected helix, for helix numbers append _NR, get default by GBT_get_default_helix |
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| 52 | |
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| 53 | #define AWAR_ERROR_MESSAGES "tmp/message/displayed" // error-messages: display awar |
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| 54 | |
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| 55 | #define AWAR_FOOTER "tmp/LeftFooter" // mode line (showing help for selected mode) |
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| 56 | #define AWAR_FOOTER_MAX_LEN 100 // max allowed textlen for mode line |
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| 57 | |
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| 58 | #define AWAR_AWM_MASK "tmp/awm_mask" |
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| 59 | |
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| 60 | #else |
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| 61 | #error aw_awar_defs.hxx included twice |
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| 62 | #endif |
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