| 1 | #FIG 3.2 Produced by xfig version 3.2.6a |
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| 2 | Landscape |
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| 3 | Center |
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| 4 | Metric |
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| 5 | A4 |
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| 6 | 100.00 |
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| 7 | Single |
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| 8 | -2 |
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| 9 | 1200 2 |
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| 10 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 1 |
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| 11 | 855 540 |
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| 12 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 2 |
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| 13 | 1575 1665 5355 1665 |
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| 14 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 2 |
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| 15 | 1080 5670 5940 5670 |
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| 16 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 2 |
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| 17 | 1080 7920 5940 7920 |
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| 18 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 1 |
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| 19 | 6210 10215 |
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| 20 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 2 |
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| 21 | 1080 6165 1980 6165 |
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| 22 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 2 |
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| 23 | 1080 9630 5940 9630 |
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| 24 | 2 1 0 1 0 7 50 0 -1 0.000 0 0 -1 0 0 2 |
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| 25 | 1080 9585 5940 9585 |
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| 26 | 4 0 -1 0 0 18 13 0.0000 4 195 2655 2520 9990 all quality entries from DB\001 |
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| 27 | 4 0 -1 0 0 18 13 0.0000 4 195 1425 1080 6615 Base analysis\001 |
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| 28 | 4 0 -1 0 0 18 13 0.0000 4 195 615 2745 6660 $base\001 |
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| 29 | 4 1 -1 0 0 2 18 0.0000 4 270 3465 3465 1575 Calculate sequence quality\001 |
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| 30 | 4 0 -1 0 0 18 13 0.0000 4 195 675 1080 1080 $close\001 |
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| 31 | 4 0 -1 0 0 18 13 0.0000 4 150 1170 3645 7605 Consensus\001 |
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| 32 | 4 0 -1 0 0 18 13 0.0000 4 210 780 2610 9180 $config\001 |
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| 33 | 4 0 -1 0 0 18 13 0.0000 4 195 1260 5355 7650 $consensus\001 |
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| 34 | 4 0 -1 0 0 18 13 0.0000 4 150 975 1080 7110 Deviation\001 |
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| 35 | 4 0 -1 0 0 18 13 0.0000 4 195 1080 2745 7155 $deviation\001 |
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| 36 | 4 0 -1 0 0 18 13 0.0000 4 195 3060 1665 4860 Evaluate only marked species\001 |
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| 37 | 4 0 -1 0 0 18 13 0.0000 4 150 600 1080 5355 Filter:\001 |
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| 38 | 4 0 -1 0 0 18 13 0.0000 4 195 585 1845 5400 $filter\001 |
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| 39 | 4 0 -1 0 0 18 13 0.0000 4 195 1080 5985 5445 $to:X:filter\001 |
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| 40 | 4 0 -1 0 0 18 13 0.0000 4 195 1470 3645 7110 GC proportion\001 |
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| 41 | 4 0 -1 0 0 18 13 0.0000 4 210 1590 5355 7155 $gc_proportion\001 |
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| 42 | 4 0 -1 0 0 18 13 0.0000 4 210 390 1080 9270 $go\001 |
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| 43 | 4 2 -1 0 0 18 12 0.0000 4 195 510 6030 1080 $help\001 |
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| 44 | 4 0 -1 0 0 18 13 0.0000 4 150 645 3645 6615 IUPAC\001 |
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| 45 | 4 0 -1 0 0 18 13 0.0000 4 210 690 5355 6660 $iupac\001 |
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| 46 | 4 0 -1 0 0 18 13 0.0000 4 150 495 1080 8460 Mark\001 |
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| 47 | 4 0 -1 0 0 18 13 0.0000 4 195 615 1845 8505 $mark\001 |
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| 48 | 4 0 -1 0 0 18 13 0.0000 4 210 1350 5355 8505 $mark_below\001 |
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| 49 | 4 0 -1 0 0 18 13 0.0000 4 210 750 1035 4905 $monly\001 |
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| 50 | 4 0 -1 0 0 18 13 0.0000 4 150 1095 1080 7605 No Helices\001 |
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| 51 | 4 0 -1 0 0 18 13 0.0000 4 210 1245 2745 7650 $no_helices\001 |
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| 52 | 4 0 -1 0 0 18 13 0.0000 4 195 1185 3510 9270 $reevaluate\001 |
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| 53 | 4 0 -1 0 0 18 13 0.0000 4 195 870 1080 10080 $remove\001 |
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| 54 | 4 0 -1 0 0 18 13 0.0000 4 195 4830 1080 2295 Select a tree to define groups to analyze (opt.):\001 |
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| 55 | 4 0 -1 0 0 18 13 0.0000 4 195 2730 2430 8460 species with quality below\001 |
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| 56 | 4 0 -1 0 0 18 13 0.0000 4 195 510 1080 2745 $tree\001 |
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| 57 | 4 2 -1 0 0 18 13 0.0000 4 195 1005 6255 4410 $to:X:tree\001 |
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| 58 | 4 0 0 0 -1 18 13 0.0000 4 195 1365 2430 8715 (unmark rest)\001 |
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| 59 | 4 0 -1 0 0 18 13 0.0000 4 195 915 1080 6075 Weights:\001 |
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