|
Last change
on this file was
12299,
checked in by westram, 11 years ago
|
- CC/CXX used by arb
- overwrite defaults after copying them into A_CC/A_CXX
- fix all errors (triggered by above change)
- remove fallbacks (probcons; MUSCLE; FASTTREE)
- set CC/CXX from A_CC/A_CXX (MrBAYES; PHYML20130708)
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|
File size:
700 bytes
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| Line | |
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| 1 | #Simple makefile to build muscle inside ARB |
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| 2 | #By Arne Boeckmann (aboeckma@mpi-bremen.de) |
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| 3 | |
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| 4 | .PHONY: all clean |
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| 5 | |
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| 6 | CXX=$(A_CXX) |
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| 7 | CXXFLAGS=-c -O3 -msse2 -mfpmath=sse -D_FILE_OFFSET_BITS=64 -DNDEBUG=1 |
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| 8 | LDFLAGS= -g |
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| 9 | |
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| 10 | OBJDIR=obj |
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| 11 | SRCDIR=src |
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| 12 | |
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| 13 | SOURCES=$(wildcard $(SRCDIR)/*.cpp) |
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| 14 | HEADERS=$(wildcard $(SRCDIR)/*.h) |
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| 15 | OBJECTS=$(addprefix $(OBJDIR)/,$(notdir $(SOURCES:.cpp=.o))) |
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| 16 | |
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| 17 | MUSCLE=$(ARBHOME)/bin/muscle |
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| 18 | |
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| 19 | SIMPLE_DEPENDS=Makefile $(HEADERS) |
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| 20 | |
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| 21 | all: $(OBJDIR) |
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| 22 | $(MAKE) $(MUSCLE) |
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| 23 | |
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| 24 | $(OBJDIR): |
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| 25 | mkdir -p $(OBJDIR) |
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| 26 | |
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| 27 | $(OBJDIR)/%.o: $(SRCDIR)/%.cpp $(SIMPLE_DEPENDS) |
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| 28 | $(CXX) $(CXXFLAGS) -o $@ $< |
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| 29 | |
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| 30 | $(MUSCLE): $(OBJECTS) $(SIMPLE_DEPENDS) |
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| 31 | $(CXX) $(LDFLAGS) $(OBJECTS) -o $(MUSCLE) |
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| 32 | |
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| 33 | clean: |
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| 34 | rm -rf $(OBJDIR) |
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| 35 | rm -f $(MUSCLE) |
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| 36 | |
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| 37 | |
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| 38 | |
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