source: branches/stable/GDE/MUSCLE/src/clustsetdf.h

#ifndef ClustSetDF_h
#define ClustSetDF_h

class MSA;
class Clust;

#include "clustset.h"
#include "distfunc.h"
#include "msa.h"

class ClustSetDF : public ClustSet
        {
public:
        ClustSetDF(const DistFunc &DF) :
                m_ptrDF(&DF)
                {
                }

public:
        virtual unsigned GetLeafCount()
                {
                return m_ptrDF->GetCount();
                }
        virtual const char *GetLeafName(unsigned uNodeIndex)
                {
                return m_ptrDF->GetName(uNodeIndex);
                }
        virtual unsigned GetLeafId(unsigned uNodeIndex)
                {
                return m_ptrDF->GetId(uNodeIndex);
                }
        virtual void JoinNodes(const Clust &C, unsigned uLeftNodeIndex,
          unsigned uRightNodeIndex, unsigned uJoinedNodeIndex,
          double *ptrdLeftLength, double *ptrdRightLength)
                {
                Quit("ClustSetDF::JoinNodes, should never be called");
                }
        virtual double ComputeDist(const Clust &C, unsigned uNodeIndex1,
          unsigned uNodeIndex2)
                {
                return m_ptrDF->GetDist(uNodeIndex1, uNodeIndex2);
                }

private:
        const DistFunc *m_ptrDF;
        };

#endif  // ClustSetDF_h