source: branches/stable/HELP_SOURCE/oldhelp/organisms.hlp

#Please insert up references in the next lines (line starts with keyword UP)
UP      arb.hlp
UP      glossary.hlp

#Please insert subtopic references  (line starts with keyword SUB)
SUB     species.hlp
SUB     genes.hlp
SUB     gene_species.hlp
SUB     organism_mark.hlp

# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}

#************* Title of helpfile !! and start of real helpfile ********
TITLE           What are Organisms?

OCCURRENCE      Everywhere

DESCRIPTION     An Organism is a special kind of species.

                It contains the whole genom sequence of a micro-organism
                in an alignment called 'ali_genom'. The sequence stored in
                that alignment has to be unaligned (=no gaps).

                Further it contains information about genes.

                Organisms do not occur in a normal ARB database (i.e. a 16s database).
                To work with organisms you have to import a genome-flatfile into a new database.

NOTES           To create alignments of genes you need to create gene-species.

EXAMPLES        None

WARNINGS        None

BUGS            No bugs known