source: branches/stable/HELP_SOURCE/oldhelp/saiProbe.hlp

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#************* Title of helpfile !! and start of real helpfile ********
TITLE          Visualization of Sequence Associated Information (SAI) of Probe Match Results.

OCCURRENCE     ARB_NT/Probes/Match Probes/Match SAI

DESCRIPTION

    This window aides Visualization of Sequence Associated Information (SAIs) of the
    Potential Probe Targets that were designed (PROBE DESIGN TOOL) and matched using PROBE
    MATCH TOOL.

    Steps to be followed to VISUALIZE SAIs for the Potential Probe Targets:

          1. Select SAI to be visualized from the Select SAI Menu. (Properties/Select SAI)

          2. Define Desired Colors (COLOR 0 to COLOR 9) for the respective CHARACTERS /
          NUMBERS in the selected SAI to paint as background of the Probe Targets
          list. (Properties/Define Color Translations)

          3. Values or Characters contained in the SAIs selected can also be displayed
          below each Probe Targets by selecting the 'DISPLAY SAI' check box
          in 'Color Translation Table' window.

          4. Once the desired SAI is selected and the respective color translation is
          defined, the SAI is painted as the background of the probe targets in the
          defined color ranges with respect to SAIs.

    One can change the COLOR RANGE by going to 'Properties/Set Colors and Fonts' menu.

NOTES

    Color Translation Definitions defined for various SAIs can be saved by clicking SAVE
    button in DEFINE COLOR TRANSLATION window. (Press STORE to save the definitions and
    press RESTORE to restore the saved definitions).

    To save the Color Translation Definitions permanently Go to ARB_NT window and save
    PROPERTIES under PROPERTIES MENU.

EXAMPLES        None

WARNINGS        None

BUGS            No bugs known