|
Last change
on this file was
8507,
checked in by westram, 12 years ago
|
- use double for weights ([0..1] instead of [0..10000])
- added tests using weights != 1
- fixed weight/length calculation to make generated consense
 independent from used weight (as long as the same weight is used for all added trees)
- no longer generates zero-bootstrap at root
- strictly speaking it is wrong now (since the edge from virtual root to cant exist, ergo it's probability should be zero)
- practically
- that zero probability would be a special case (and is an error at all other edges)
- a probability of 100% is used (which gets skipped when saving the )
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File size:
1.0 KB
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| 1 | // ============================================================= // |
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| 2 | // // |
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| 3 | // File : CT_def.hxx // |
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| 4 | // Purpose : // |
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| 5 | // // |
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| 6 | // Coded by Ralf Westram (coder@reallysoft.de) in March 2012 // |
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| 7 | // Institute of Microbiology (Technical University Munich) // |
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| 8 | // http://www.arb-home.de/ // |
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| 9 | // // |
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| 10 | // ============================================================= // |
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| 11 | |
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| 12 | #ifndef CT_DEF_HXX |
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| 13 | #define CT_DEF_HXX |
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| 14 | |
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| 15 | // debug flags |
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| 16 | #if defined(DEBUG) |
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| 17 | #define NTREE_DEBUG_FUNCTIONS // debug function for NTREE |
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| 18 | // #define DUMP_PART_INIT |
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| 19 | // #define DUMP_PART_INSERTION |
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| 20 | #endif // DEBUG |
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| 21 | |
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| 22 | inline int double_cmp(double d1, const double d2) { |
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| 23 | double d = d2-d1; |
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| 24 | return d<0 ? -1 : (d>0 ? 1 : 0); |
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| 25 | } |
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| 26 | |
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| 27 | #else |
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| 28 | #error CT_def.hxx included twice |
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| 29 | #endif // CT_DEF_HXX |
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