Last change
on this file was
12267,
checked in by westram, 10 years ago
|
- full update from 'trunk' into 'rc'
- because i was (nearly) only fixing bugs in the last 5 weeks
- adds:
- log:branches/fix@11985,11990:11997,12008:12013,12023:12042,12049:12053,12058:12137,12147:12156
- log:branches/gcc@12076:12079
- log:branches/tree@12004:12019,12116:12120
- log:trunk@11971:11972,11974:11980,11982:11989,11991:12260
|
File size:
1.7 KB
|
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1 | // ================================================================ // |
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2 | // // |
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3 | // File : gui_aliview.hxx // |
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4 | // Purpose : // |
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5 | // // |
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6 | // Coded by Ralf Westram (coder@reallysoft.de) in November 2009 // |
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7 | // Institute of Microbiology (Technical University Munich) // |
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8 | // http://www.arb-home.de/ // |
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9 | // // |
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10 | // ================================================================ // |
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11 | |
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12 | #ifndef GUI_ALIVIEW_HXX |
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13 | #define GUI_ALIVIEW_HXX |
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14 | |
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15 | #ifndef ARBDB_BASE_H |
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16 | #include <arbdb_base.h> |
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17 | #endif |
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18 | #ifndef ARBTOOLS_H |
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19 | #include <arbtools.h> |
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20 | #endif |
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21 | |
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22 | struct adfiltercbstruct; |
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23 | class ColumnStat; |
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24 | class AW_root; |
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25 | class AW_awar; |
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26 | class AP_filter; |
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27 | class AP_weights; |
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28 | class AliView; |
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29 | |
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30 | class WeightedFilter : virtual Noncopyable { |
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31 | adfiltercbstruct *adfilter; |
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32 | ColumnStat *column_stat; |
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33 | |
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34 | public: |
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35 | WeightedFilter(GBDATA *gb_main, AW_root *aw_root, const char *awar_filter_name, const char *awar_columnStat_name, AW_awar *awar_default_alignment); |
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36 | ~WeightedFilter(); |
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37 | |
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38 | GBDATA *get_gb_main() const; |
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39 | AW_root *get_aw_root() const; |
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40 | |
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41 | adfiltercbstruct *get_adfiltercbstruct() { return adfilter; } |
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42 | ColumnStat *get_column_stat() { return column_stat; } |
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43 | |
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44 | // factory functions |
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45 | AP_filter *create_filter() const; |
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46 | AP_weights *create_weights(const AP_filter *filter, GB_ERROR& error) const; |
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47 | AliView *create_aliview(const char *aliname, GB_ERROR& error) const; |
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48 | }; |
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49 | |
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50 | |
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51 | #else |
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52 | #error gui_aliview.hxx included twice |
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53 | #endif // GUI_ALIVIEW_HXX |
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