source: tags/arb-6.0.3

Name Size Rev Age Author Last Change
../
AISC ​ 11176   12 years westram * fixes compilation with COVERAGE!=0 (was broken by [10956])
AISC_COM ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
AISC_MKPTPS ​ 11889   12 years westram - add missing comment to closing #endif of test-sections
ARB_GDE ​ 12444   11 years westram * merge hotfixes from 'trunk' into 'stable' * adds: - …
ARBDB ​ 14505   10 years westram * merge bugfixes from 'trunk' into 'stable' * adds: log:trunk@14503:14504
AWT ​ 12555   11 years westram * merge hotfixes from 'trunk' into 'stable' * adds: - …
AWTC ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
AWTI ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
bin ​ 11778   12 years westram * reintegrates 'macros' into 'trunk' - implements #456 * adds: …
BINDEP ​ 10577   12 years westram - added a bunch of small arb tools into dependency decls
BINDINGS ​ 10998   12 years westram * cflags were completely unused (untested)
BUGEX ​ 7044   15 years westram * fixed include wrappers (merges [7006] [7007]) - use gcc-style …
CONSENSUS_TREE ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
CONVERTALN ​ 11947   12 years westram * merge misc changes from 'customize' into 'trunk' * adds: - …
CORE ​ 14505   10 years westram * merge bugfixes from 'trunk' into 'stable' * adds: log:trunk@14503:14504
DBSERVER ​ 11167   12 years westram - leak stuffed
DIST ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
doc ​ 6141   16 years westram * spellchecked all (phew)
EDIT4 ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
EISPACK ​ 10996   12 years westram * use cflags before cxxflags
etc ​ 6141   16 years westram * spellchecked all (phew)
GDE ​ 12686   11 years epruesse merge log:trunk@12659:12662 to stable
GDEHELP ​ 11886   12 years westram * reintegrates 'cleanup' into 'trunk' * adds: - …
GENOM ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
GENOM_IMPORT ​ 11844   12 years westram * merge [11840:11843] from 'customize' into 'trunk' * adds: - …
GL ​ 11805   12 years westram * export 'LINUX' and 'REDHAT' to submakefiles * use ifeq instead of …
HEADERLIBS ​ 7895   14 years westram * added arb_rnacma (correlated mutation analysis) written by Breno …
HELP_SOURCE ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
ISLAND_HOPPING ​ 10997   12 years westram * use cflags before cxxflags (where locally modified)
lib ​ 12718   11 years epruesse add arb.xml
MERGE ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
MULTI_PROBE ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
NALIGNER ​ 11060   12 years westram * reintegrates 'ptsfix' into 'trunk': * adds: - …
NAMES ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
NAMES_COM ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
NTREE ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
PARSIMONY ​ 12554   11 years westram * merge fixes from 'trunk' into 'stable' * adds: - …
PERL2ARB ​ 12313   11 years westram * merge bugfixes from 'trunk' into 'rc' - fixes build process when …
PERL_SCRIPTS ​ 12556   11 years westram * merge hotfixes from 'trunk' into 'stable' * adds: - …
PERLTOOLS ​ 11844   12 years westram * merge [11840:11843] from 'customize' into 'trunk' * adds: - …
PHYLO ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
PRIMER_DESIGN ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
PROBE ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
PROBE_COM ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
PROBE_DESIGN ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
PROBE_SET ​ 11464   12 years westram - un-dummy-fied transaction (renames only)
ptpan ​ 11060   12 years westram * reintegrates 'ptsfix' into 'trunk': * adds: - …
READSEQ ​ 11805   12 years westram * export 'LINUX' and 'REDHAT' to submakefiles * use ifeq instead of …
RNA3D ​ 12313   11 years westram * merge bugfixes from 'trunk' into 'rc' - fixes build process when …
RNACMA ​ 12303   11 years westram * merge bugfixes since [12269] from 'trunk' into 'rc' * adds: - …
SECEDIT ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
SEQ_QUALITY ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
SERVERCNTRL ​ 11915   12 years westram - changed 'server startup error' message (was to closely considering …
SH ​ 14419   10 years westram * merge svn-path fixes from 'trunk' into 'stable' * adds: …
SL ​ 12554   11 years westram * merge fixes from 'trunk' into 'stable' * adds: - …
SOURCE_TOOLS ​ 14506   10 years westram * update changelog and increment patchlevel
STAT ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
TEMPLATES ​ 12332   11 years westram * merge bugfixes from 'trunk' into 'rc' - installation @ debian …
TOOLS ​ 12555   11 years westram * merge hotfixes from 'trunk' into 'stable' * adds: - …
TREEGEN ​ 10996   12 years westram * use cflags before cxxflags
UNIT_TESTER ​ 12267   12 years westram * full update from 'trunk' into 'rc' - because i was (nearly) only …
util ​ 14419   10 years westram * merge svn-path fixes from 'trunk' into 'stable' * adds: …
WETC ​ 11034   12 years westram * depends for [11033]
WINDOW ​ 14505   10 years westram * merge bugfixes from 'trunk' into 'stable' * adds: log:trunk@14503:14504
XML ​ 11012   12 years westram * misc warnings fixed; others suppressed
XML_IMPORT ​ 10996   12 years westram * use cflags before cxxflags
arb_CHANGES.txt 16.6 KB ​ 14506   10 years westram * update changelog and increment patchlevel
arb_install.sh 14.2 KB ​ 11718   12 years westram * reverts [11717] * merge [11714] into trunk (accidentally went into …
arb_INSTALL.txt 4.6 KB ​ 12332   11 years westram * merge bugfixes from 'trunk' into 'rc' - installation @ debian …
arb_LICENSE.txt 10.8 KB ​ 10842   12 years westram * reintegrates 'help' into 'trunk': * adds: - …
arb_OS_X.txt 5.4 KB ​ 14419   10 years westram * merge svn-path fixes from 'trunk' into 'stable' * adds: …
arb_OS_X_MacPorts.txt 370 bytes ​ 6288   16 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_README.txt 7.4 KB ​ 12563   11 years westram * make version indenpendent (2nd attempt)
arb_UBUNTU.txt 1.3 KB ​ 14419   10 years westram * merge svn-path fixes from 'trunk' into 'stable' * adds: …
arbsrc_README.txt 210 bytes ​ 6288   16 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.1 KB ​ 7331   15 years westram - tested and added gcc 4.5.2
config.makefile.template 1.7 KB ​ 12694   11 years epruesse merge log:trunk@12692 (broken DEBIAN := 1 setting)
demo.arb 78.9 KB ​ 7664   14 years westram * merge from dev [7509] [7510] [7511] [7514] [7517] [7520] [7524] …
Doxyfile 62.3 KB ​ 11492   12 years westram * fix several doxygen issues (doxygen 1.6.3) - force macro …
Makefile 65.5 KB ​ 14507   10 years westram * merge enabled gcc-versions from 'trunk' into 'stable' - …
README 717 bytes ​ 5390   17 years westram - TAB-Ex
  • Property svn:ignore set to
    *.last_gcc
    ARB_SOURCE_DOC
    ChangeLog
    INCLUDE
    PERL5
    arb.tgz
    arbsrc.lst
    arbsrc_*.tgz
    compile.log
    config.makefile
    do_core
    TAGS
    .cdtproject
    .project
    .settings
    arbsrc.tgz
    *.bak
    arb_time.log
    latest.patch
    patches.arb
    makeloc.here
    interdiff.patch
    white.patch
    latest_iwhite.patch
    nbproject
    fulldiff.patch
    untested.patch
    *.last_compiler
    arb-dev.tgz
  • Property svn:mergeinfo set to (toggle deleted branches)
    /branches/alilink11490-11577,​12422
    /branches/tree10290-10481,​10500-11400,​11403-11422,​11425-11487,​11556-11559,​12004-12019,​12116-12120
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