source: tags/arb-6.0.5/HELP_SOURCE/oldhelp/genes.hlp

Last change on this file was 3614, checked in by westram, 19 years ago
  • corrected links
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 1.2 KB
Line 
1#Please insert up references in the next lines (line starts with keyword UP)
2UP      arb.hlp
3UP      glossary.hlp
4UP      species.hlp
5
6#Please insert subtopic references  (line starts with keyword SUB)
7SUB     mark_genes.hlp
8SUB     selected_gene.hlp
9SUB     gene_species.hlp
10# SUB   gene_info.hlp
11SUB     organisms.hlp
12
13# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}
14
15#************* Title of helpfile !! and start of real helpfile ********
16TITLE           What are Genes ?
17
18DESCRIPTION     One gene is one database entry containing subentries which
19                describe the gene. Every gene belongs to a specific
20                organism, but one organism may have many genes.
21
22                Main (reserved) entries of a gene:
23
24                     name, pos_begin, pos_end, complement,
25                     pos_joined, pos_begin1, pos_end1, pos_begin2, pos_end2, ...
26                     pos_uncertain,
27                     codon_start, transl_table
28
29                See LINK{gene_info.hlp} for details about these fields.
30
31NOTE            The main-sequence of a organism(species) is stored in the
32                alignment 'ali_genom'. You should not change this alignment.
33               
34WARNINGS        The alignment 'ali_genom' should NOT contain any gaps!!!!
35
36BUGS            No known bugs
37
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