|
Last change
on this file was
11740,
checked in by westram, 11 years ago
|
- remove directories 'binaries' and 'scripts' from SVN and generate them from Makefile
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|
File size:
885 bytes
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| 1 | # MAFFT for ARB |
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| 2 | # by Arne Boeckmann (2013) |
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| 3 | |
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| 4 | PROG = MAFFT |
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| 5 | |
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| 6 | # force gcc (hack to fix cent5 build) |
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| 7 | export CC = gcc |
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| 8 | |
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| 9 | #disable makeflags |
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| 10 | MAKEFLAGS= |
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| 11 | MAFFTDIR=mafft-7.055-with-extensions |
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| 12 | SCRIPTDIR=$(MAFFTDIR)/scripts |
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| 13 | BINDIR=$(MAFFTDIR)/binaries |
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| 14 | |
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| 15 | # ARBs standard target |
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| 16 | $(MAIN) : $(SCRIPTDIR) $(BINDIR) |
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| 17 | $(MAKE) mafft.stamp |
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| 18 | |
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| 19 | $(SCRIPTDIR): |
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| 20 | mkdir -p $@ |
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| 21 | |
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| 22 | $(BINDIR): |
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| 23 | mkdir -p $@ |
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| 24 | |
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| 25 | clean_core: |
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| 26 | +cd $(MAFFTDIR)/core && make clean |
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| 27 | |
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| 28 | clean_extensions: |
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| 29 | +cd $(MAFFTDIR)/extensions && make clean |
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| 30 | |
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| 31 | clean_here: |
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| 32 | rm -rf $(ARBHOME)/lib/mafft |
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| 33 | rm -f mafft.stamp |
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| 34 | rm -f $(ARBHOME)/bin/mafft* |
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| 35 | |
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| 36 | clean: clean_core clean_extensions clean_here |
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| 37 | |
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| 38 | make_core: |
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| 39 | +cd $(MAFFTDIR)/core && make && make install |
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| 40 | |
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| 41 | make_extensions: |
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| 42 | +cd $(MAFFTDIR)/extensions && make && make install |
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| 43 | |
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| 44 | mafft.stamp: make_core make_extensions |
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| 45 | touch mafft.stamp |
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| 46 | |
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| 47 | .PHONY : clean clean_core clean_extensions clean_here make_core make_extensions |
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