source: tags/arb_5.2/GDEHELP/MENUS/phylip_dist_org.menu

Last change on this file was 5077, checked in by westram, 16 years ago
  • typo
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 933 bytes
Line 
1item:Phylip Distance Methods (Original Phylip, Interactive)
2itemmeta: I
3itemmethod:(GEN_INFILE(in1);\
4            RUN_IN_WINDOW(($DPGM;\
5                           mv -f outfile infile;\
6                           ${ARB_XCMD:-cmdtool} $PROGRAM;\
7                           $DISPLAY_FUNC));\
8            RM_LOCAL_FILES(in1))&
9itemhelp:phylip_distance.help
10
11arg:DISPLAY_FUNC
12argtype:choice_menu
13arglabel:What to do with the tree?
14argchoice:ARB ('tree_ph_xxx'):(arb_read_tree tree_ph_$$ outtree "PRG=$PROGRAM FILTER=$FILTER PKG=phylip (Interactive)")
15argchoice:TextEdit:arb_textedit outtree
16argchoice:Treetool:treetool outtree
17
18arg:PROGRAM
19arglabel:Which method?
20argtype:choice_menu
21argchoice:Fitch:fitch
22argchoice:Kitsch:kitsch
23argchoice:Neighbor:neighbor
24
25arg:DPGM
26arglabel:Treat data as..
27argtype:choice_menu
28argchoice:RNA/DNA (dnadist):dnadist
29argchoice:AA      (protdist):protdist
30
31
32in:in1
33informat:genbank
34inmask:sdfgdfg
35insave:
36
Note: See TracBrowser for help on using the repository browser.