1 | # =============================================================== # |
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2 | # # |
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3 | # File : Makefile # |
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4 | # # |
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5 | # Institute of Microbiology (Technical University Munich) # |
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6 | # http://www.arb-home.de/ # |
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7 | # # |
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8 | # =============================================================== # |
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9 | |
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10 | # ----------------------------------------------------- |
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11 | # The ARB Makefile is aware of the following defines: |
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12 | # |
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13 | # BUILDHOST_64=0/1 1=>compile on 64 bit platform (defaults to ARB_64) |
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14 | # DEVELOPER=name special compilation (values: ANY,RELEASE,your name) |
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15 | # OPENGL=0/1 whether OPENGL is available |
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16 | # |
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17 | # ----------------------------------------------------- |
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18 | # ARB Makefile and ARB source code are aware of the following defines: |
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19 | # |
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20 | # $(MACH) name of the machine (LINUX,SUN4,SUN5,HP,SGI or DIGITAL; see config.makefile) |
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21 | # DEBUG compiles the DEBUG sections |
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22 | # DEBUG_GRAPHICS all X-graphics are flushed immediately (for debugging) |
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23 | # ARB_64=0/1 1=>compile 64 bit version |
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24 | # |
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25 | # ----------------------------------------------------- |
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26 | # The ARB source code is aware of the following defines: |
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27 | # |
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28 | # NDEBUG doesn't compile the DEBUG sections |
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29 | # DEVEL_$(DEVELOPER) developer-dependent flag (enables you to have private sections in code) |
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30 | # DEVELOPER='ANY' (default setting) will be ignored |
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31 | # configurable in config.makefile |
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32 | # |
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33 | # ----------------------------------------------------- |
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34 | # Read configuration |
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35 | include config.makefile |
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36 | |
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37 | ifeq ($(LD_LIBRARY_PATH),'') |
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38 | LD_LIBRARY_PATH:=${ARBHOME}/lib |
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39 | endif |
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40 | |
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41 | FORCEMASK = umask 002 |
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42 | |
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43 | # ---------------------- [unconditionally used options] |
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44 | |
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45 | GCC:=gcc |
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46 | GPP:=g++ |
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47 | CPPreal:=cpp |
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48 | |
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49 | |
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50 | |
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51 | # ---------------------- compiler version detection |
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52 | |
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53 | # supported compiler versions: |
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54 | |
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55 | ALLOWED_GCC_3xx_VERSIONS=3.2 3.3.1 3.3.3 3.3.4 3.3.5 3.3.6 3.4.0 3.4.2 3.4.3 |
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56 | ALLOWED_GCC_4xx_VERSIONS=\ |
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57 | 4.0.0 4.0.1 4.0.2 4.0.3 \ |
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58 | 4.1.1 4.1.2 4.1.3 \ |
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59 | 4.2.0 4.2.1 4.2.3 4.2.4 \ |
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60 | 4.3 4.3.1 4.3.2 4.3.3 \ |
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61 | 4.4.1 4.4.3 \ |
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62 | |
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63 | ALLOWED_GCC_VERSIONS=$(ALLOWED_GCC_3xx_VERSIONS) $(ALLOWED_GCC_4xx_VERSIONS) |
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64 | |
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65 | GCC_VERSION_FOUND=$(shell $(GCC) -dumpversion) |
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66 | GCC_VERSION_ALLOWED=$(strip $(subst ___,,$(foreach version,$(ALLOWED_GCC_VERSIONS),$(findstring ___$(version)___,___$(GCC_VERSION_FOUND)___)))) |
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67 | |
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68 | USING_GCC_3XX=$(strip $(foreach version,$(ALLOWED_GCC_3xx_VERSIONS),$(findstring $(version),$(GCC_VERSION_ALLOWED)))) |
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69 | USING_GCC_4XX=$(strip $(foreach version,$(ALLOWED_GCC_4xx_VERSIONS),$(findstring $(version),$(GCC_VERSION_ALLOWED)))) |
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70 | |
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71 | #---------------------- define special directories for non standard builds |
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72 | |
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73 | ifdef DARWIN |
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74 | OSX_SDK:=/Developer/SDKs/MacOSX10.5.sdk |
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75 | OSX_FW:=/System/Library/Frameworks |
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76 | OSX_FW_OPENGL:=$(OSX_FW)/OpenGL.framework/Versions/A/Libraries |
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77 | OSX_FW_IMAGEIO:=$(OSX_FW)/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources |
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78 | endif |
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79 | |
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80 | #---------------------- |
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81 | |
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82 | ifdef DARWIN |
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83 | LINK_STATIC=1# link static |
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84 | else |
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85 | LINK_STATIC=0# link dynamically |
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86 | endif |
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87 | |
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88 | shared_cflags :=# flags for shared lib compilation |
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89 | lflags :=# linker flags |
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90 | extended_warnings :=# warning flags for C and C++-compiler |
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91 | extended_cpp_warnings :=# warning flags for C++-compiler only |
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92 | |
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93 | |
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94 | ifeq ($(DEBUG),0) |
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95 | dflags := -DNDEBUG# defines |
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96 | cflags := -O4# compiler flags (C and C++) |
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97 | ifndef DARWIN |
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98 | lflags += -O99 --strip-all# linker flags |
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99 | endif |
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100 | endif |
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101 | |
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102 | ifeq ($(DEBUG),1) |
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103 | dflags := -DDEBUG |
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104 | cflags := -O0 -g -g3 -ggdb -ggdb3 |
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105 | # cflags := -O2 -g -g3 -ggdb -ggdb3 # use this for callgrind (force inlining) |
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106 | ifndef DARWIN |
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107 | lflags += -g |
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108 | endif |
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109 | |
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110 | POST_COMPILE := 2>&1 | $(ARBHOME)/SOURCE_TOOLS/postcompile.pl |
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111 | |
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112 | # Enable several warnings |
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113 | extended_warnings := -Wwrite-strings -Wunused -Wno-aggregate-return -Wshadow |
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114 | extended_cpp_warnings := -Wnon-virtual-dtor -Wreorder -Wpointer-arith |
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115 | ifneq ('$(USING_GCC_3XX)','') |
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116 | extended_cpp_warnings += -Wdisabled-optimization -Wmissing-format-attribute |
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117 | extended_cpp_warnings += -Wmissing-noreturn # -Wfloat-equal |
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118 | endif |
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119 | ifneq ('$(USING_GCC_4XX)','') |
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120 | # extended_cpp_warnings += -Wwhatever |
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121 | endif |
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122 | |
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123 | ifeq ($(DEBUG_GRAPHICS),1) |
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124 | dflags += -DDEBUG_GRAPHICS |
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125 | endif |
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126 | endif |
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127 | |
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128 | #---------------------- developer |
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129 | |
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130 | ifneq ($(DEVELOPER),ANY) # ANY=default setting (skip all developer specific code) |
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131 | ifdef dflags |
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132 | dflags += -DDEVEL_$(DEVELOPER)# activate developer/release specific code |
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133 | endif |
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134 | endif |
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135 | |
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136 | #---------------------- 32 or 64 bit |
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137 | |
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138 | ifndef ARB_64 |
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139 | ARB_64=0#default to 32bit |
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140 | endif |
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141 | ifndef BUILDHOST_64 |
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142 | BUILDHOST_64:=$(ARB_64)# assume build host is same as version (see config.makefile) |
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143 | endif |
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144 | |
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145 | ifeq ($(ARB_64),1) |
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146 | dflags += -DARB_64 #-fPIC |
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147 | lflags += |
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148 | shared_cflags += -fPIC |
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149 | |
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150 | ifeq ($(BUILDHOST_64),1) |
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151 | # build 64-bit ARB version on 64-bit host |
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152 | CROSS_LIB:=# empty = autodetect below |
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153 | ifdef DARWIN |
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154 | cflags += -arch x86_64 |
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155 | lflags += -arch x86_64 |
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156 | endif |
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157 | else |
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158 | # build 64-bit ARB version on 32-bit host |
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159 | CROSS_LIB:=/lib64 |
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160 | cflags += -m64 |
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161 | lflags += -m64 -m elf_x86_64 |
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162 | endif |
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163 | else |
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164 | ifeq ($(BUILDHOST_64),1) |
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165 | # build 32-bit ARB version on 64-bit host |
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166 | CROSS_LIB:=# empty = autodetect below |
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167 | cflags += -m32 |
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168 | lflags += -m32 -m elf_i386 |
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169 | else |
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170 | # build 32-bit ARB version on 32-bit host |
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171 | CROSS_LIB:=/lib |
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172 | endif |
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173 | endif |
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174 | |
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175 | ifeq ('$(CROSS_LIB)','') |
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176 | # autodetect libdir |
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177 | ifeq ($(ARB_64),1) |
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178 | CROSS_LIB:=`(test -d /lib64 && echo lib64) || echo lib` |
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179 | else |
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180 | CROSS_LIB:=`(test -d /lib32 && echo lib32) || echo lib` |
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181 | endif |
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182 | endif |
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183 | |
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184 | #---------------------- other flags |
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185 | |
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186 | dflags += -D$(MACH) # define machine |
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187 | |
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188 | ifdef DARWIN |
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189 | cflags += -no-cpp-precomp |
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190 | shared_cflags += -fno-common |
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191 | else |
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192 | dflags += $(shell getconf LFS_CFLAGS) |
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193 | endif |
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194 | |
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195 | cflags += -pipe |
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196 | cflags += -fmessage-length=0# don't wrap compiler output |
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197 | cflags += -funit-at-a-time |
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198 | cflags += -fPIC |
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199 | |
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200 | #---------------------- X11 location |
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201 | |
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202 | XHOME:=/usr/X11R6 |
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203 | XINCLUDES:=-I$(XHOME)/include |
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204 | |
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205 | ifdef DARWIN |
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206 | XINCLUDES := -I/sw/include -I$(OSX_SDK)/usr/X11/include -I$(OSX_SDK)/usr/include/krb5 -I/usr/OpenMotif/include #Snow Leopard couldn't find OpenMotif |
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207 | endif |
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208 | |
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209 | ifdef DARWIN |
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210 | XLIBS := -L/usr/OpenMotif/lib -lXm -L$(XHOME)/lib -lpng -lXt -lX11 -lXext -lc -lXmu -lXi |
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211 | XLIBS += -lGLU -lGL -Wl,-dylib_file,$(OSX_FW_OPENGL)/libGL.dylib:$(OSX_FW_OPENGL)/libGL.dylib |
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212 | else |
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213 | XLIBS:=-L$(XHOME)/$(CROSS_LIB) -lXm -lXpm -lXt -lXext -lX11 |
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214 | endif |
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215 | |
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216 | #---------------------- open GL |
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217 | |
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218 | ifeq ($(OPENGL),1) |
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219 | cflags += -DARB_OPENGL # activate OPENGL code |
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220 | GL := gl # this is the name of the OPENGL base target |
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221 | GL_LIB := -lGL -L$(ARBHOME)/GL/glAW -lglAW |
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222 | |
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223 | ifdef DEBIAN |
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224 | GL_LIB += -lpthread |
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225 | endif |
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226 | |
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227 | GL_PNGLIBS := -L$(ARBHOME)/GL/glpng -lglpng_arb -lpng |
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228 | |
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229 | ifdef DARWIN |
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230 | GLEWLIB := -L/usr/lib -lGLEW -L$(OSX_SDK)/usr/X11/lib -lGLw |
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231 | GLUTLIB := -L$(XHOME)/lib -lglut |
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232 | else |
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233 | GLEWLIB := -lGLEW -lGLw |
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234 | GLUTLIB := -lglut |
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235 | endif |
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236 | |
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237 | GL_LIBS := $(GL_LIB) $(GLEWLIB) $(GLUTLIB) $(GL_PNGLIBS) |
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238 | |
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239 | #XLIBS += $(GL_LIB) |
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240 | |
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241 | else |
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242 | # OPENGL=0 |
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243 | |
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244 | GL_LIBS:=# no opengl -> no libs |
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245 | GL:=# don't build ARB openGL libs |
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246 | |
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247 | endif |
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248 | |
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249 | #---------------------- tiff lib: |
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250 | |
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251 | ifdef DARWIN |
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252 | TIFFLIBS := -L/usr/local/lib -ltiff -L$(OSX_FW_IMAGEIO) -lTIFF |
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253 | else |
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254 | TIFFLIBS := -ltiff |
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255 | endif |
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256 | |
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257 | #---------------------- basic libs: |
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258 | |
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259 | SYSLIBS:= |
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260 | |
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261 | ifdef DARWIN |
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262 | SYSLIBS += -lstdc++ |
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263 | else |
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264 | SYSLIBS += -lm |
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265 | endif |
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266 | |
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267 | #---------------------- include symbols? |
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268 | |
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269 | ifeq ($(TRACESYM),1) |
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270 | ifdef DARWIN |
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271 | cdynamic = |
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272 | ldynamic = |
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273 | else |
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274 | cdynamic = -rdynamic |
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275 | ldynamic = --export-dynamic |
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276 | endif |
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277 | endif |
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278 | |
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279 | # ------------------------------------------------------------------------- |
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280 | # Don't put any machine/version/etc conditionals below! |
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281 | # (instead define variables above) |
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282 | # ------------------------------------------------------------------------- |
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283 | |
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284 | cflags += -W -Wall $(dflags) $(extended_warnings) $(cdynamic) |
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285 | |
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286 | cppflags := $(extended_cpp_warnings) |
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287 | |
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288 | ifeq ($(DEVELOPER),RALF) |
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289 | HAVE_GNUPP0X=`SOURCE_TOOLS/requireVersion.pl 4.3 $(GCC_VERSION_FOUND)` |
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290 | ifeq ($(HAVE_GNUPP0X),1) |
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291 | # ensure compatibility with upcoming C++ standard |
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292 | cppflags += -std=gnu++0x |
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293 | endif |
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294 | endif |
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295 | |
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296 | # compiler settings: |
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297 | |
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298 | ACC := $(GCC)# compile C |
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299 | CPP := $(GPP) $(cppflags)# compile C++ |
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300 | ACCLIB := $(ACC) $(shared_cflags)# compile C (shared libs) |
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301 | CPPLIB := $(CPP) $(shared_cflags)# compile C++ (shared libs) |
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302 | |
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303 | PP := $(CPPreal)# preprocessor |
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304 | |
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305 | lflags += $(ldynamic) |
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306 | |
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307 | LINK_STATIC_LIB := ld $(lflags) -r -o# link static lib |
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308 | LINK_EXECUTABLE := $(GPP) $(lflags) $(cdynamic) -o# link executable (c++) |
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309 | |
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310 | ifeq ($(LINK_STATIC),1) |
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311 | SHARED_LIB_SUFFIX = a# static lib suffix |
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312 | LINK_SHARED_LIB := $(LINK_STATIC_LIB) |
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313 | else |
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314 | SHARED_LIB_SUFFIX = so# shared lib suffix |
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315 | LINK_SHARED_LIB := $(GPP) $(lflags) -shared -o# link shared lib |
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316 | endif |
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317 | |
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318 | # other used tools |
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319 | |
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320 | CTAGS := etags |
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321 | ifdef DARWIN |
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322 | XMKMF := /usr/X11/bin/xmkmf |
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323 | else |
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324 | XMKMF := /usr/bin/X11/xmkmf |
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325 | endif |
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326 | MAKEDEPEND_PLAIN = makedepend |
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327 | |
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328 | MAKEDEPEND = $(FORCEMASK);$(MAKEDEPEND_PLAIN) |
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329 | |
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330 | SEP:=-------------------------------------------------------------------------------- |
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331 | |
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332 | # delete variables unused below |
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333 | |
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334 | lflags:= |
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335 | |
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336 | # ------------------------- |
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337 | # Main arb targets: |
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338 | # ------------------------- |
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339 | |
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340 | first_target: |
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341 | $(MAKE) checks |
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342 | @echo $(SEP) |
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343 | @echo 'Main targets:' |
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344 | @echo '' |
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345 | @echo ' all - Compile ARB + TOOLs + and copy shared libs + link foreign software' |
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346 | @echo ' (That is most likely the target you want)' |
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347 | @echo '' |
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348 | @echo ' clean - remove generated files ("SUBDIR/SUBDIR.clean" to clean only SUBDIR)' |
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349 | @echo ' rebuild - clean + all' |
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350 | @echo ' relink - remove all binaries and relink them from objects' |
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351 | @echo '' |
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352 | @echo 'Some often used sub targets (make all makes them all):' |
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353 | @echo '' |
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354 | @echo ' arb - Just compile ARB (but none of the integrated tools)' |
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355 | @echo ' menus - create GDEHELP/ARB_GDEmenus from GDEHELP/ARB_GDEmenus.source' |
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356 | @echo ' perl - Compile the PERL XSUBS into lib/ARB.so and create links in lib to perl' |
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357 | @echo ' binlink - Create all links in the bin directory' |
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358 | @echo '' |
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359 | @echo 'Development targets:' |
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360 | @echo '' |
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361 | @echo ' depends - create or update dependencies ("SUBDIR/SUBDIR.depends" to update only SUBDIR)' |
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362 | @echo ' proto - create or update prototypes ("SUBDIR/SUBDIR.proto" to update only SUBDIR)' |
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363 | @echo ' tags - create tags for xemacs' |
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364 | @echo ' rmbak - remove all "*%" and cores' |
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365 | @echo ' show - show available shortcuts (AKA subtargets)' |
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366 | @echo ' up - shortcut for depends+proto+tags' |
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367 | @echo ' modified - rebuild files modified in svn checkout (touches files!)' |
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368 | @echo '' |
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369 | @echo 'Internal maintenance:' |
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370 | @echo '' |
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371 | @echo ' rel_minor - build a release (increases minor version number)' |
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372 | @echo ' rel_major - build a release (increases MAJOR version number)' |
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373 | @echo ' tarfile - make rebuild and create arb version tarfile ("tarfile_quick" to skip rebuild)' |
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374 | @echo ' save - save all basic ARB sources into arbsrc_DATE' |
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375 | @echo ' rtc_patch - create LIBLINK/libRTC8M.so (SOLARIS ONLY)' |
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376 | @echo ' source_doc - create doxygen documentation' |
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377 | @echo ' relocated - rebuild partly (use when you have relocated ARBHOME)' |
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378 | @echo ' check_res - check ressource usage' |
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379 | @echo '' |
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380 | @echo $(SEP) |
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381 | @echo '' |
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382 | |
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383 | |
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384 | # auto-generate config.makefile: |
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385 | |
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386 | CONFIG_MAKEFILE_FOUND=$(wildcard config.makefile) |
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387 | |
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388 | config.makefile : config.makefile.template |
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389 | @echo -------------------------------------------------------------------------------- |
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390 | ifeq ($(strip $(CONFIG_MAKEFILE_FOUND)),) |
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391 | @cp $< $@ |
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392 | @echo '$(ARBHOME)/$@:1: has been generated.' |
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393 | @echo 'Please edit $@ to configure your system!' |
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394 | @echo -------------------------------------------------------------------------------- |
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395 | @false |
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396 | else |
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397 | @echo '$(ARBHOME)/$<:1: is more recent than' |
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398 | @echo '$(ARBHOME)/$@:1:' |
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399 | @ls -al config.makefile* |
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400 | @echo -------------------------------------------------------------------------------- |
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401 | @echo "Updating $@ (if this fails, check manually)" |
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402 | SOURCE_TOOLS/update_config_makefile.pl |
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403 | @echo "Sucessfully updated $@" |
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404 | @echo -------------------------------------------------------------------------------- |
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405 | @ls -al config.makefile* |
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406 | @echo -------------------------------------------------------------------------------- |
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407 | @echo "Diff to your old config.makefile:" |
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408 | @echo -------------------------------------------------------------------------------- |
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409 | -diff $@.bak $@ |
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410 | @echo -------------------------------------------------------------------------------- |
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411 | endif |
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412 | |
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413 | # check if everything is configured correctly |
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414 | |
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415 | check_DEVELOPER: |
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416 | ifndef DEVELOPER |
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417 | @echo 'config.makefile:1: DEVELOPER not defined' |
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418 | @false |
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419 | endif |
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420 | |
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421 | check_DEBUG: |
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422 | ifndef dflags |
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423 | @echo 'config.makefile:1: DEBUG has to be defined. Valid values are 0 and 1' |
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424 | @false |
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425 | endif |
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426 | |
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427 | check_ARB_64: |
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428 | ifndef ARB_64 |
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429 | @echo 'config.makefile:1: ARB_64 has to be defined. Valid values are 0 and 1' |
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430 | @false |
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431 | endif |
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432 | |
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433 | # ---------------------------------------- check gcc version |
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434 | |
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435 | check_same_GCC_VERSION: |
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436 | $(ARBHOME)/SOURCE_TOOLS/check_same_gcc_version.pl $(GCC_VERSION_ALLOWED) |
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437 | |
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438 | check_GCC_VERSION: |
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439 | @echo 'GCC version check:' |
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440 | @echo " - Your version is '$(GCC_VERSION_FOUND)'" |
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441 | ifeq ('$(GCC_VERSION_ALLOWED)', '') |
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442 | @echo ' - This version is not in the list of supported gcc-versions:' |
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443 | @$(foreach version,$(ALLOWED_GCC_VERSIONS),echo ' * $(version)';) |
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444 | @echo ' - You may either ..' |
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445 | @echo ' - add your version to ALLOWED_GCC_VERSIONS in the Makefile and try it out or' |
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446 | @echo ' - switch to one of the allowed versions (see arb_README_gcc.txt for installing' |
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447 | @echo ' a different version of gcc)' |
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448 | @echo '' |
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449 | @false |
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450 | else |
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451 | @echo " - Supported gcc version '$(GCC_VERSION_ALLOWED)' detected - fine!" |
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452 | @echo '' |
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453 | $(MAKE) check_same_GCC_VERSION |
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454 | |
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455 | endif |
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456 | |
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457 | GCC_WITH_VTABLE_AFTER_CLASS=#occurred only with no longer supported $(ALLOWED_GCC_295_VERSIONS) |
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458 | HAVE_GCC_WITH_VTABLE_AFTER_CLASS=$(strip $(foreach version,$(GCC_WITH_VTABLE_AFTER_CLASS),$(findstring $(version),$(GCC_VERSION_ALLOWED)))) |
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459 | |
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460 | # depending on the version of gcc the location of the vtable pointer differs. |
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461 | ifeq ('$(HAVE_GCC_WITH_VTABLE_AFTER_CLASS)', '') |
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462 | VTABLE_INFRONTOF_CLASS=1 |
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463 | else |
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464 | VTABLE_INFRONTOF_CLASS=0 |
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465 | endif |
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466 | |
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467 | #---------------------- check ARBHOME |
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468 | |
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469 | # use arb_INSTALL.txt to determine whether ARBHOME points to correct directory |
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470 | ARB_INSTALL_FOUND=$(wildcard $(ARBHOME)/arb_INSTALL.txt) |
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471 | |
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472 | check_ARBHOME: |
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473 | ifeq ($(strip $(ARB_INSTALL_FOUND)),) |
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474 | @echo ------------------------------------------------------------ |
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475 | @echo "ARBHOME is set to '$(ARBHOME)'" |
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476 | @echo "The environment variable ARBHOME has to point to the top arb source directory." |
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477 | @echo "If you use bash enter:" |
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478 | @echo " export ARBHOME='`pwd`'" |
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479 | @echo ------------------------------------------------------------ |
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480 | @false |
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481 | endif |
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482 | |
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483 | ARB_PATH_SET=$(findstring $(ARBHOME)/bin,$(PATH)) |
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484 | |
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485 | check_PATH: check_ARBHOME |
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486 | ifeq ($(strip $(ARB_PATH_SET)),) |
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487 | @echo ------------------------------------------------------------ |
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488 | @echo "The environment variable PATH has to contain $(ARBHOME)/bin" |
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489 | @echo "If you use bash enter:" |
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490 | @echo ' export PATH=$$ARBHOME/bin:$$PATH' |
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491 | @echo ------------------------------------------------------------ |
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492 | @false |
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493 | endif |
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494 | |
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495 | check_TOOLS: |
---|
496 | @util/arb_check_build_env.pl \ |
---|
497 | "$(ACC)" \ |
---|
498 | "$(CPP)" \ |
---|
499 | "$(GPP)" \ |
---|
500 | "$(PP)" \ |
---|
501 | "$(ACCLIB)" \ |
---|
502 | "$(CPPLIB)" \ |
---|
503 | "$(XMKMF)" \ |
---|
504 | "$(MAKEDEPEND_PLAIN)" \ |
---|
505 | "$(LINK_SHARED_LIB)" \ |
---|
506 | "$(LINK_SHARED_LIB)" \ |
---|
507 | |
---|
508 | |
---|
509 | check_ENVIRONMENT : check_PATH check_TOOLS |
---|
510 | |
---|
511 | check_tabs: check_setup |
---|
512 | ifeq ($(DEBUG),1) |
---|
513 | @SOURCE_TOOLS/tabBrake.pl |
---|
514 | endif |
---|
515 | |
---|
516 | force_tab_check: |
---|
517 | @touch -t 198001010000 SOURCE_TOOLS/tabBrake.stamp |
---|
518 | @$(MAKE) check_tabs |
---|
519 | |
---|
520 | |
---|
521 | # --------------------- |
---|
522 | |
---|
523 | check_setup: check_ENVIRONMENT check_DEBUG check_ARB_64 check_DEVELOPER check_GCC_VERSION |
---|
524 | @echo Your setup seems to be ok. |
---|
525 | |
---|
526 | checks: check_setup check_tabs |
---|
527 | |
---|
528 | |
---|
529 | # end test section ------------------------------ |
---|
530 | |
---|
531 | ARBDB_LIB=-lARBDB |
---|
532 | ARBDBPP_LIB=-lARBDBPP |
---|
533 | |
---|
534 | LIBS = $(ARBDB_LIB) $(SYSLIBS) |
---|
535 | GUI_LIBS = $(LIBS) -lAW -lAWT $(XLIBS) |
---|
536 | |
---|
537 | LIBPATH = -L$(ARBHOME)/LIBLINK |
---|
538 | |
---|
539 | DEST_LIB = lib |
---|
540 | DEST_BIN = bin |
---|
541 | |
---|
542 | AINCLUDES := -I. -I$(ARBHOME)/INCLUDE $(XINCLUDES) |
---|
543 | CPPINCLUDES := -I. -I$(ARBHOME)/INCLUDE $(XINCLUDES) |
---|
544 | MAKEDEPENDFLAGS := -- $(cflags) -- -DARB_OPENGL -I. -Y$(ARBHOME)/INCLUDE |
---|
545 | |
---|
546 | ifeq ($(VTABLE_INFRONTOF_CLASS),1) |
---|
547 | # Some code in ARB depends on the location of the vtable pointer |
---|
548 | # (it does a cast from class AP_tree to struct GBT_TREE). In order to |
---|
549 | # work around that hack properly, we define FAKE_VTAB_PTR |
---|
550 | # if the vtable is located at the beginning of class. |
---|
551 | # We are really sorry for that hack. |
---|
552 | cflags:=$(cflags) -DFAKE_VTAB_PTR=char |
---|
553 | endif |
---|
554 | |
---|
555 | # ------------------------------- |
---|
556 | # old PTSERVER or PTPAN? |
---|
557 | |
---|
558 | ifeq ($(PTPAN),1) |
---|
559 | # PTPAN only libs |
---|
560 | ARCHS_PT_SERVER = \ |
---|
561 | ptpan/PROBE.a |
---|
562 | else |
---|
563 | ifeq ($(PTPAN),2) |
---|
564 | # special mode to compile both servers (developers only!) |
---|
565 | ARCHS_PT_SERVER = \ |
---|
566 | ptpan/PROBE.a \ |
---|
567 | PROBE/PROBE.a |
---|
568 | ARCHS_PT_SERVER_LINK = PROBE/PROBE.a # default to old ptserver |
---|
569 | else |
---|
570 | # PT-server only libs |
---|
571 | ARCHS_PT_SERVER = \ |
---|
572 | PROBE/PROBE.a |
---|
573 | endif |
---|
574 | endif |
---|
575 | |
---|
576 | ifndef ARCHS_PT_SERVER_LINK |
---|
577 | ARCHS_PT_SERVER_LINK = $(ARCHS_PT_SERVER) |
---|
578 | endif |
---|
579 | |
---|
580 | # ------------------------------- |
---|
581 | # List of all Directories |
---|
582 | |
---|
583 | ARCHS = \ |
---|
584 | $(ARCHS_PT_SERVER) \ |
---|
585 | AISC/dummy.a \ |
---|
586 | AISC_MKPTPS/dummy.a \ |
---|
587 | ALIV3/ALIV3.a \ |
---|
588 | ARBDB/libARBDB.a \ |
---|
589 | ARBDB2/libARBDB.a \ |
---|
590 | ARBDBPP/libARBDBPP.a \ |
---|
591 | ARBDBS/libARBDB.a \ |
---|
592 | ARB_GDE/ARB_GDE.a \ |
---|
593 | AWT/libAWT.a \ |
---|
594 | AWTC/AWTC.a \ |
---|
595 | AWTI/AWTI.a \ |
---|
596 | CONSENSUS_TREE/CONSENSUS_TREE.a \ |
---|
597 | CONVERTALN/CONVERTALN.a \ |
---|
598 | DBSERVER/DBSERVER.a \ |
---|
599 | DIST/DIST.a \ |
---|
600 | EDIT/EDIT.a \ |
---|
601 | EDIT4/EDIT4.a \ |
---|
602 | EISPACK/EISPACK.a \ |
---|
603 | GDE/GDE.a \ |
---|
604 | GENOM/GENOM.a \ |
---|
605 | GENOM_IMPORT/GENOM_IMPORT.a \ |
---|
606 | GL/GL.a \ |
---|
607 | ISLAND_HOPPING/ISLAND_HOPPING.a \ |
---|
608 | MERGE/MERGE.a \ |
---|
609 | MULTI_PROBE/MULTI_PROBE.a \ |
---|
610 | NALIGNER/NALIGNER.a \ |
---|
611 | NAMES/NAMES.a \ |
---|
612 | NAMES_COM/server.a \ |
---|
613 | NTREE/NTREE.a \ |
---|
614 | PARSIMONY/PARSIMONY.a \ |
---|
615 | PGT/PGT.a \ |
---|
616 | PHYLO/PHYLO.a \ |
---|
617 | PRIMER_DESIGN/PRIMER_DESIGN.a \ |
---|
618 | PROBE_COM/server.a \ |
---|
619 | PROBE_DESIGN/PROBE_DESIGN.a \ |
---|
620 | PROBE_SET/PROBE_SET.a \ |
---|
621 | READSEQ/READSEQ.a \ |
---|
622 | RNA3D/RNA3D.a \ |
---|
623 | SECEDIT/SECEDIT.a \ |
---|
624 | SEQ_QUALITY/SEQ_QUALITY.a \ |
---|
625 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
626 | SL/SL.a \ |
---|
627 | STAT/STAT.a \ |
---|
628 | TOOLS/TOOLS.a \ |
---|
629 | TREEGEN/TREEGEN.a \ |
---|
630 | WETC/WETC.a \ |
---|
631 | WINDOW/libAW.a \ |
---|
632 | XML/XML.a \ |
---|
633 | |
---|
634 | ARCHS_CLIENT_PROBE = PROBE_COM/client.a |
---|
635 | ARCHS_CLIENT_NAMES = NAMES_COM/client.a |
---|
636 | ARCHS_MAKEBIN = AISC_MKPTPS/dummy.a AISC/dummy.a |
---|
637 | |
---|
638 | ARCHS_COMMUNICATION = NAMES_COM/server.a \ |
---|
639 | PROBE_COM/server.a |
---|
640 | |
---|
641 | # communication libs need aisc and aisc_mkpts: |
---|
642 | $(ARCHS_COMMUNICATION:.a=.dummy) : $(ARCHS_MAKEBIN:.a=.dummy) |
---|
643 | |
---|
644 | #*************************************************************************************** |
---|
645 | # Individual Programs Section |
---|
646 | #*************************************************************************************** |
---|
647 | |
---|
648 | #*********************************** arb_ntree ************************************** |
---|
649 | NTREE = bin/arb_ntree |
---|
650 | ARCHS_NTREE = \ |
---|
651 | $(ARCHS_CLIENT_PROBE) \ |
---|
652 | ARB_GDE/ARB_GDE.a \ |
---|
653 | AWTC/AWTC.a \ |
---|
654 | AWTI/AWTI.a \ |
---|
655 | GENOM/GENOM.a \ |
---|
656 | GENOM_IMPORT/GENOM_IMPORT.a \ |
---|
657 | MERGE/MERGE.a \ |
---|
658 | MULTI_PROBE/MULTI_PROBE.a \ |
---|
659 | NTREE/NTREE.a \ |
---|
660 | PRIMER_DESIGN/PRIMER_DESIGN.a \ |
---|
661 | PROBE_DESIGN/PROBE_DESIGN.a \ |
---|
662 | SEQ_QUALITY/SEQ_QUALITY.a \ |
---|
663 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
664 | SL/AW_NAME/AW_NAME.a \ |
---|
665 | SL/DB_SCANNER/DB_SCANNER.a \ |
---|
666 | SL/FILE_BUFFER/FILE_BUFFER.a \ |
---|
667 | SL/HELIX/HELIX.a \ |
---|
668 | SL/REGEXPR/REGEXPR.a \ |
---|
669 | SL/TREE_READ/TREE_READ.a \ |
---|
670 | SL/TREE_WRITE/TREE_WRITE.a \ |
---|
671 | STAT/STAT.a \ |
---|
672 | XML/XML.a \ |
---|
673 | |
---|
674 | $(NTREE): $(ARCHS_NTREE:.a=.dummy) NAMES_COM/server.dummy shared_libs |
---|
675 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_NTREE) $(GUI_LIBS) || ( \ |
---|
676 | echo Link $@ ; \ |
---|
677 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_NTREE) $(GUI_LIBS)" ; \ |
---|
678 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_NTREE) $(GUI_LIBS) \ |
---|
679 | ) |
---|
680 | |
---|
681 | #*********************************** arb_rna3d ************************************** |
---|
682 | RNA3D = bin/arb_rna3d |
---|
683 | ARCHS_RNA3D = \ |
---|
684 | RNA3D/RNA3D.a \ |
---|
685 | |
---|
686 | $(RNA3D): $(ARCHS_RNA3D:.a=.dummy) shared_libs |
---|
687 | @echo $@ currently does not work as standalone application |
---|
688 | false |
---|
689 | |
---|
690 | #*********************************** arb_edit ************************************** |
---|
691 | EDIT = bin/arb_edit |
---|
692 | ARCHS_EDIT = \ |
---|
693 | NAMES_COM/client.a \ |
---|
694 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
695 | EDIT/EDIT.a \ |
---|
696 | ARB_GDE/ARB_GDE.a \ |
---|
697 | STAT/STAT.a \ |
---|
698 | XML/XML.a \ |
---|
699 | SL/HELIX/HELIX.a \ |
---|
700 | SL/AW_HELIX/AW_HELIX.a \ |
---|
701 | SL/AW_NAME/AW_NAME.a \ |
---|
702 | |
---|
703 | $(EDIT): $(ARCHS_EDIT:.a=.dummy) shared_libs |
---|
704 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_EDIT) $(GUI_LIBS) || ( \ |
---|
705 | echo Link $@ ; \ |
---|
706 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_EDIT) -lARBDBPP $(GUI_LIBS)" ; \ |
---|
707 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_EDIT) -lARBDBPP $(GUI_LIBS) ; \ |
---|
708 | ) |
---|
709 | |
---|
710 | #*********************************** arb_edit4 ************************************** |
---|
711 | EDIT4 = bin/arb_edit4 |
---|
712 | |
---|
713 | ARCHS_EDIT4 := \ |
---|
714 | NAMES_COM/client.a \ |
---|
715 | AWTC/AWTC.a \ |
---|
716 | EDIT4/EDIT4.a \ |
---|
717 | SECEDIT/SECEDIT.a \ |
---|
718 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
719 | STAT/STAT.a \ |
---|
720 | ARB_GDE/ARB_GDE.a \ |
---|
721 | ISLAND_HOPPING/ISLAND_HOPPING.a \ |
---|
722 | SL/FAST_ALIGNER/FAST_ALIGNER.a \ |
---|
723 | SL/HELIX/HELIX.a \ |
---|
724 | SL/AW_HELIX/AW_HELIX.a \ |
---|
725 | SL/AW_NAME/AW_NAME.a \ |
---|
726 | SL/FILE_BUFFER/FILE_BUFFER.a \ |
---|
727 | XML/XML.a \ |
---|
728 | |
---|
729 | ifeq ($(OPENGL),1) |
---|
730 | ARCHS_EDIT4 += RNA3D/RNA3D.a |
---|
731 | endif |
---|
732 | LIBS_EDIT4 := $(GL_LIBS) |
---|
733 | |
---|
734 | $(EDIT4): $(ARCHS_EDIT4:.a=.dummy) shared_libs $(GL) |
---|
735 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_EDIT4) $(GUI_LIBS) || ( \ |
---|
736 | echo Link $@ ; \ |
---|
737 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_EDIT4) $(GUI_LIBS) $(LIBS_EDIT4)" ; \ |
---|
738 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_EDIT4) $(GUI_LIBS) $(LIBS_EDIT4) \ |
---|
739 | ) |
---|
740 | |
---|
741 | #*********************************** arb_pgt ************************************** |
---|
742 | |
---|
743 | PGT = bin/arb_pgt |
---|
744 | ARCHS_PGT = \ |
---|
745 | PGT/PGT.a \ |
---|
746 | |
---|
747 | PGT_SYS_LIBS=$(XLIBS) $(TIFFLIBS) $(LIBS) |
---|
748 | |
---|
749 | $(PGT) : $(ARCHS_PGT:.a=.dummy) shared_libs |
---|
750 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_PGT) || ( \ |
---|
751 | echo Link $@ ; \ |
---|
752 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PGT) $(PGT_SYS_LIBS)"; \ |
---|
753 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PGT) $(PGT_SYS_LIBS); \ |
---|
754 | ) |
---|
755 | |
---|
756 | |
---|
757 | #*********************************** arb_wetc ************************************** |
---|
758 | WETC = bin/arb_wetc |
---|
759 | ARCHS_WETC = \ |
---|
760 | WETC/WETC.a \ |
---|
761 | SL/HELIX/HELIX.a \ |
---|
762 | XML/XML.a \ |
---|
763 | |
---|
764 | $(WETC): $(ARCHS_WETC:.a=.dummy) shared_libs |
---|
765 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_WETC) $(GUI_LIBS) || ( \ |
---|
766 | echo Link $@ ; \ |
---|
767 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_WETC) $(GUI_LIBS)" ; \ |
---|
768 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_WETC) $(GUI_LIBS) ; \ |
---|
769 | ) |
---|
770 | |
---|
771 | #*********************************** arb_dist ************************************** |
---|
772 | DIST = bin/arb_dist |
---|
773 | ARCHS_DIST = \ |
---|
774 | $(ARCHS_CLIENT_PROBE) \ |
---|
775 | DIST/DIST.a \ |
---|
776 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
777 | CONSENSUS_TREE/CONSENSUS_TREE.a \ |
---|
778 | EISPACK/EISPACK.a \ |
---|
779 | SL/HELIX/HELIX.a \ |
---|
780 | XML/XML.a \ |
---|
781 | |
---|
782 | $(DIST): $(ARCHS_DIST:.a=.dummy) shared_libs |
---|
783 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_DIST) $(GUI_LIBS) || ( \ |
---|
784 | echo Link $@ ; \ |
---|
785 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_DIST) $(GUI_LIBS)" ; \ |
---|
786 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_DIST) $(GUI_LIBS) ; \ |
---|
787 | ) |
---|
788 | |
---|
789 | #*********************************** arb_pars ************************************** |
---|
790 | PARSIMONY = bin/arb_pars |
---|
791 | ARCHS_PARSIMONY = \ |
---|
792 | NAMES_COM/client.a \ |
---|
793 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
794 | PARSIMONY/PARSIMONY.a \ |
---|
795 | SL/HELIX/HELIX.a \ |
---|
796 | SL/AW_NAME/AW_NAME.a \ |
---|
797 | XML/XML.a \ |
---|
798 | |
---|
799 | $(PARSIMONY): $(ARCHS_PARSIMONY:.a=.dummy) shared_libs |
---|
800 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_PARSIMONY) $(GUI_LIBS) || ( \ |
---|
801 | echo Link $@ ; \ |
---|
802 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PARSIMONY) $(GUI_LIBS)" ; \ |
---|
803 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PARSIMONY) $(GUI_LIBS) ; \ |
---|
804 | ) |
---|
805 | |
---|
806 | #*********************************** arb_treegen ************************************** |
---|
807 | TREEGEN = bin/arb_treegen |
---|
808 | ARCHS_TREEGEN = \ |
---|
809 | TREEGEN/TREEGEN.a \ |
---|
810 | |
---|
811 | $(TREEGEN) : $(ARCHS_TREEGEN:.a=.dummy) |
---|
812 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_TREEGEN) || ( \ |
---|
813 | echo Link $@ ; \ |
---|
814 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_TREEGEN)" ; \ |
---|
815 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_TREEGEN) ; \ |
---|
816 | ) |
---|
817 | |
---|
818 | #*********************************** arb_naligner ************************************** |
---|
819 | NALIGNER = bin/arb_naligner |
---|
820 | ARCHS_NALIGNER = \ |
---|
821 | $(ARCHS_CLIENT_PROBE) \ |
---|
822 | NALIGNER/NALIGNER.a \ |
---|
823 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
824 | SL/HELIX/HELIX.a \ |
---|
825 | |
---|
826 | $(NALIGNER): $(ARCHS_NALIGNER:.a=.dummy) shared_libs |
---|
827 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_NALIGNER) || ( \ |
---|
828 | echo Link $@ ; \ |
---|
829 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_NALIGNER) $(LIBS)" ; \ |
---|
830 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_NALIGNER) $(LIBS) \ |
---|
831 | ) |
---|
832 | |
---|
833 | #*********************************** arb_secedit ************************************** |
---|
834 | SECEDIT = bin/arb_secedit |
---|
835 | ARCHS_SECEDIT = \ |
---|
836 | SECEDIT/SECEDIT.a \ |
---|
837 | XML/XML.a \ |
---|
838 | |
---|
839 | $(SECEDIT): $(ARCHS_SECEDIT:.a=.dummy) shared_libs |
---|
840 | @echo $@ currently does not work as standalone application |
---|
841 | false |
---|
842 | |
---|
843 | |
---|
844 | #*********************************** arb_phylo ************************************** |
---|
845 | PHYLO = bin/arb_phylo |
---|
846 | ARCHS_PHYLO = \ |
---|
847 | PHYLO/PHYLO.a \ |
---|
848 | SL/HELIX/HELIX.a \ |
---|
849 | XML/XML.a \ |
---|
850 | |
---|
851 | $(PHYLO): $(ARCHS_PHYLO:.a=.dummy) shared_libs |
---|
852 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_PHYLO) $(GUI_LIBS) || ( \ |
---|
853 | echo Link $@ ; \ |
---|
854 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PHYLO) $(GUI_LIBS)" ; \ |
---|
855 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PHYLO) $(GUI_LIBS) ; \ |
---|
856 | ) |
---|
857 | |
---|
858 | #*************************************************************************************** |
---|
859 | # SERVER SECTION |
---|
860 | #*************************************************************************************** |
---|
861 | |
---|
862 | #*********************************** arb_db_server ************************************** |
---|
863 | DBSERVER = bin/arb_db_server |
---|
864 | ARCHS_DBSERVER = \ |
---|
865 | DBSERVER/DBSERVER.a \ |
---|
866 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
867 | |
---|
868 | $(DBSERVER): $(ARCHS_DBSERVER:.a=.dummy) shared_libs |
---|
869 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_DBSERVER) $(ARBDB_LIB) || ( \ |
---|
870 | echo Link $@ ; \ |
---|
871 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_DBSERVER) $(ARBDB_LIB) $(SYSLIBS)" ; \ |
---|
872 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_DBSERVER) $(ARBDB_LIB) $(SYSLIBS) ; \ |
---|
873 | ) |
---|
874 | |
---|
875 | #*********************************** arb_pt_server ************************************** |
---|
876 | PROBE = bin/arb_pt_server |
---|
877 | ARCHS_PROBE_COMMON = \ |
---|
878 | PROBE_COM/server.a \ |
---|
879 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
880 | SL/HELIX/HELIX.a \ |
---|
881 | |
---|
882 | ARCHS_PROBE_LINK = \ |
---|
883 | $(ARCHS_PROBE_COMMON) \ |
---|
884 | $(ARCHS_PT_SERVER_LINK) \ |
---|
885 | |
---|
886 | ARCHS_PROBE_DEPEND = \ |
---|
887 | $(ARCHS_PROBE_COMMON) \ |
---|
888 | $(ARCHS_PT_SERVER) \ |
---|
889 | |
---|
890 | $(PROBE): $(ARCHS_PROBE_DEPEND:.a=.dummy) shared_libs |
---|
891 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_PROBE_LINK) $(ARBDB_LIB) $(ARCHS_CLIENT_PROBE) || ( \ |
---|
892 | echo Link $@ ; \ |
---|
893 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PROBE_LINK) $(ARBDB_LIB) $(ARCHS_CLIENT_PROBE) $(SYSLIBS)" ; \ |
---|
894 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_PROBE_LINK) $(ARBDB_LIB) $(ARCHS_CLIENT_PROBE) $(SYSLIBS) ; \ |
---|
895 | ) |
---|
896 | |
---|
897 | #*********************************** arb_name_server ************************************** |
---|
898 | NAMES = bin/arb_name_server |
---|
899 | ARCHS_NAMES = \ |
---|
900 | NAMES_COM/server.a \ |
---|
901 | NAMES/NAMES.a \ |
---|
902 | SERVERCNTRL/SERVERCNTRL.a \ |
---|
903 | |
---|
904 | $(NAMES): $(ARCHS_NAMES:.a=.dummy) shared_libs |
---|
905 | @SOURCE_TOOLS/binuptodate.pl $@ $(ARCHS_NAMES) $(ARBDB_LIB) $(ARCHS_CLIENT_NAMES) || ( \ |
---|
906 | echo Link $@ ; \ |
---|
907 | echo "$(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_NAMES) $(ARBDB_LIB) $(ARCHS_CLIENT_NAMES) $(SYSLIBS)" ; \ |
---|
908 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_NAMES) $(ARBDB_LIB) $(ARCHS_CLIENT_NAMES) $(SYSLIBS) ; \ |
---|
909 | ) |
---|
910 | |
---|
911 | #*********************************** OTHER EXECUTABLES ******************************************** |
---|
912 | |
---|
913 | ALIV3 = bin/aliv3 |
---|
914 | ARCHS_ALIV3 = \ |
---|
915 | ALIV3/ALIV3.a \ |
---|
916 | SL/HELIX/HELIX.a \ |
---|
917 | |
---|
918 | $(ALIV3): $(ARCHS_ALIV3:.a=.dummy) shared_libs |
---|
919 | @echo $(SEP) Link $@ |
---|
920 | $(LINK_EXECUTABLE) $@ $(LIBPATH) $(ARCHS_ALIV3) $(ARBDB_LIB) $(SYSLIBS) |
---|
921 | |
---|
922 | #*********************************** SHARED LIBRARIES SECTION ************************************** |
---|
923 | |
---|
924 | shared_libs: dball aw awt |
---|
925 | @echo -------------------- Updating shared libraries |
---|
926 | $(MAKE) libs |
---|
927 | |
---|
928 | addlibs: |
---|
929 | (perl $(ARBHOME)/SOURCE_TOOLS/provide_libs.pl \ |
---|
930 | "arbhome=$(ARBHOME)" \ |
---|
931 | "opengl=$(OPENGL)" \ |
---|
932 | "link_static=$(LINK_STATIC)" \ |
---|
933 | ) |
---|
934 | |
---|
935 | libs: lib/libARBDB.$(SHARED_LIB_SUFFIX) \ |
---|
936 | lib/libARBDBPP.$(SHARED_LIB_SUFFIX) \ |
---|
937 | lib/libARBDO.$(SHARED_LIB_SUFFIX) \ |
---|
938 | lib/libAW.$(SHARED_LIB_SUFFIX) \ |
---|
939 | lib/libAWT.$(SHARED_LIB_SUFFIX) |
---|
940 | |
---|
941 | lib/lib%.$(SHARED_LIB_SUFFIX): LIBLINK/lib%.$(SHARED_LIB_SUFFIX) |
---|
942 | cp $< $@ |
---|
943 | |
---|
944 | # lib/$(MOTIF_LIBNAME): $(MOTIF_LIBPATH) |
---|
945 | # cp $< $@ |
---|
946 | |
---|
947 | #*************************************************************************************** |
---|
948 | # Recursive calls to sub-makefiles |
---|
949 | #*************************************************************************************** |
---|
950 | |
---|
951 | include SOURCE_TOOLS/export2sub |
---|
952 | |
---|
953 | %.depends: |
---|
954 | @cp -p $(@D)/Makefile $(@D)/Makefile.old # save old Makefile |
---|
955 | @$(MAKE) -C $(@D) -r \ |
---|
956 | "AUTODEPENDS=1" \ |
---|
957 | "MAIN=nothing" \ |
---|
958 | "cflags=noCflags" \ |
---|
959 | depends; |
---|
960 | @grep "^# DO NOT DELETE" $(@D)/Makefile >/dev/null |
---|
961 | @cat $(@D)/Makefile \ |
---|
962 | | SOURCE_TOOLS/fix_depends.pl \ |
---|
963 | >$(@D)/Makefile.2 |
---|
964 | @mv $(@D)/Makefile.old $(@D)/Makefile # restore old Makefile |
---|
965 | @$(ARBHOME)/SOURCE_TOOLS/mv_if_diff $(@D)/Makefile.2 $(@D)/Makefile # update Makefile if changed |
---|
966 | |
---|
967 | %.proto: |
---|
968 | @$(MAKE) -C $(@D) \ |
---|
969 | "AUTODEPENDS=0" \ |
---|
970 | "MAIN=nothing" \ |
---|
971 | "cflags=noCflags" \ |
---|
972 | proto |
---|
973 | |
---|
974 | %.clean: |
---|
975 | @$(MAKE) -C $(@D) \ |
---|
976 | "AUTODEPENDS=0" \ |
---|
977 | "MAIN=nothing" \ |
---|
978 | "cflags=noCflags" \ |
---|
979 | clean |
---|
980 | |
---|
981 | # rule to generate main target (normally a library): |
---|
982 | %.dummy: |
---|
983 | @( export ID=$$$$; \ |
---|
984 | (( \ |
---|
985 | echo "$(SEP) Make everything in $(@D)"; \ |
---|
986 | $(MAKE) -C $(@D) -r \ |
---|
987 | "AUTODEPENDS=1" \ |
---|
988 | "MAIN = $(@F:.dummy=.a)" \ |
---|
989 | "cflags = $(cflags) -DIN_ARB_$(subst /,_,$(@D))" \ |
---|
990 | ) >$(@D).$$ID.log 2>&1 && (cat $(@D).$$ID.log;rm $(@D).$$ID.log)) || (cat $(@D).$$ID.log;rm $(@D).$$ID.log;false)) |
---|
991 | |
---|
992 | # Additional dependencies for subtargets: |
---|
993 | |
---|
994 | comtools: $(ARCHS_MAKEBIN:.a=.dummy) |
---|
995 | |
---|
996 | PROBE_COM/PROBE_COM.dummy : comtools |
---|
997 | PROBE_COM/server.dummy : comtools |
---|
998 | PROBE_COM/client.dummy : comtools |
---|
999 | |
---|
1000 | NAMES_COM/NAMES_COM.dummy : comtools |
---|
1001 | NAMES_COM/server.dummy : comtools |
---|
1002 | NAMES_COM/client.dummy : comtools |
---|
1003 | |
---|
1004 | com_probe: PROBE_COM/PROBE_COM.dummy |
---|
1005 | com_names: NAMES_COM/NAMES_COM.dummy |
---|
1006 | com_all: com_probe com_names |
---|
1007 | |
---|
1008 | TOOLS/TOOLS.dummy : shared_libs SERVERCNTRL/SERVERCNTRL.dummy com_probe |
---|
1009 | |
---|
1010 | AWTC/AWTC.dummy : com_names com_probe |
---|
1011 | |
---|
1012 | NAMES/NAMES.dummy : com_names |
---|
1013 | SL/AW_NAME/AW_NAME.dummy : com_names |
---|
1014 | |
---|
1015 | PROBE/PROBE.dummy : com_probe |
---|
1016 | MULTI_PROBE/MULTI_PROBE.dummy : com_probe |
---|
1017 | PROBE_DESIGN/PROBE_DESIGN.dummy : com_probe |
---|
1018 | NALIGNER/NALIGNER.dummy : com_probe |
---|
1019 | |
---|
1020 | ARB_GDE/ARB_GDE.dummy : proto_tools |
---|
1021 | |
---|
1022 | |
---|
1023 | #*************************************************************************************** |
---|
1024 | # Short aliases to make targets |
---|
1025 | #*************************************************************************************** |
---|
1026 | |
---|
1027 | show: |
---|
1028 | @echo $(SEP) |
---|
1029 | @echo 'Aliases for often needed targets:' |
---|
1030 | @echo '' |
---|
1031 | @echo ' executables:' |
---|
1032 | @echo '' |
---|
1033 | @echo ' nt arb_ntree' |
---|
1034 | @echo ' e4 arb_edit4 (includes secedit)' |
---|
1035 | @echo ' di arb_dist' |
---|
1036 | @echo ' ph arb_phylo' |
---|
1037 | @echo ' pa arb_parsimony' |
---|
1038 | @echo ' tg arb_treegen' |
---|
1039 | @echo ' ds arb_dbserver' |
---|
1040 | @echo ' pt arb_pt_server' |
---|
1041 | @echo ' na arb_name_server' |
---|
1042 | @echo '' |
---|
1043 | @echo ' libraries:' |
---|
1044 | @echo '' |
---|
1045 | @echo ' com communication libraries' |
---|
1046 | @echo ' dball ARB database (all versions: db dbs and db2)' |
---|
1047 | @echo ' aw GUI lib' |
---|
1048 | @echo ' awt GUI toolkit' |
---|
1049 | @echo ' awtc general purpose library' |
---|
1050 | @echo ' awti import/export library' |
---|
1051 | @echo ' mp multi probe library' |
---|
1052 | @echo ' ge genome library' |
---|
1053 | @echo ' pd probe design lib' |
---|
1054 | @echo ' prd primer design lib' |
---|
1055 | @echo '' |
---|
1056 | @echo ' other targets:' |
---|
1057 | @echo '' |
---|
1058 | @echo ' help recompile help files' |
---|
1059 | @echo ' tools make small tools used by arb' |
---|
1060 | @echo '' |
---|
1061 | @echo ' foreign targets:' |
---|
1062 | @echo '' |
---|
1063 | @echo ' gde GDE' |
---|
1064 | @echo ' agde ARB_GDE' |
---|
1065 | @echo '' |
---|
1066 | @echo 'for other targets inspect $(ARBHOME)/Makefile' |
---|
1067 | @echo '' |
---|
1068 | @echo $(SEP) |
---|
1069 | |
---|
1070 | source_doc: |
---|
1071 | doxygen |
---|
1072 | |
---|
1073 | mbin: $(ARCHS_MAKEBIN:.a=.dummy) |
---|
1074 | |
---|
1075 | com: $(ARCHS_COMMUNICATION:.a=.dummy) |
---|
1076 | |
---|
1077 | help: HELP_SOURCE/HELP_SOURCE.dummy |
---|
1078 | |
---|
1079 | HELP_SOURCE/HELP_SOURCE.dummy: xml menus# need to create some files in GDE-subtree first |
---|
1080 | |
---|
1081 | dball: db dbs db2 dp |
---|
1082 | db: ARBDB/libARBDB.dummy |
---|
1083 | dbs: ARBDBS/libARBDB.dummy |
---|
1084 | db2: ARBDB2/libARBDB.dummy |
---|
1085 | dp: ARBDBPP/libARBDBPP.dummy |
---|
1086 | aw: WINDOW/libAW.dummy |
---|
1087 | awt: AWT/libAWT.dummy |
---|
1088 | awtc: AWTC/AWTC.dummy |
---|
1089 | awti: AWTI/AWTI.dummy |
---|
1090 | |
---|
1091 | mp: MULTI_PROBE/MULTI_PROBE.dummy |
---|
1092 | mg: MERGE/MERGE.dummy |
---|
1093 | ge: GENOM/GENOM.dummy |
---|
1094 | prd: PRIMER_DESIGN/PRIMER_DESIGN.dummy |
---|
1095 | |
---|
1096 | nt: menus $(NTREE) |
---|
1097 | ed: $(EDIT) |
---|
1098 | |
---|
1099 | nal: $(NALIGNER) |
---|
1100 | a3: $(ALIV3) |
---|
1101 | |
---|
1102 | di: $(DIST) |
---|
1103 | ph: $(PHYLO) |
---|
1104 | pa: $(PARSIMONY) |
---|
1105 | tg: $(TREEGEN) |
---|
1106 | |
---|
1107 | 3d: RNA3D/RNA3D.dummy |
---|
1108 | gl: GL/GL.dummy |
---|
1109 | sl: NAMES_COM/NAMES_COM.dummy |
---|
1110 | $(MAKE) SL/SL.dummy |
---|
1111 | |
---|
1112 | ds: $(DBSERVER) |
---|
1113 | pt: $(PROBE) |
---|
1114 | pst: PROBE_SET/PROBE_SET.dummy |
---|
1115 | pd: PROBE_DESIGN/PROBE_DESIGN.dummy |
---|
1116 | na: $(NAMES) |
---|
1117 | sq: SEQ_QUALITY/SEQ_QUALITY.dummy |
---|
1118 | |
---|
1119 | sec: SECEDIT/SECEDIT.dummy |
---|
1120 | |
---|
1121 | e4: wetc help readseq menus $(EDIT4) |
---|
1122 | gi: GENOM_IMPORT/GENOM_IMPORT.dummy |
---|
1123 | wetc: $(WETC) |
---|
1124 | |
---|
1125 | pgt: $(PGT) |
---|
1126 | xml: XML/XML.dummy |
---|
1127 | xmlin: XML_IMPORT/XML_IMPORT.dummy# broken |
---|
1128 | templ: TEMPLATES/TEMPLATES.dummy |
---|
1129 | |
---|
1130 | #******************************************************************************** |
---|
1131 | |
---|
1132 | up: checks |
---|
1133 | $(MAKE) links |
---|
1134 | $(MAKE) -k up_internal |
---|
1135 | |
---|
1136 | up_internal: depends proto tags valgrind_update |
---|
1137 | |
---|
1138 | #******************************************************************************** |
---|
1139 | |
---|
1140 | modified: |
---|
1141 | SOURCE_TOOLS/touch_modified.pl |
---|
1142 | $(MAKE) all |
---|
1143 | |
---|
1144 | #******************************************************************************** |
---|
1145 | |
---|
1146 | depends: |
---|
1147 | $(MAKE) comtools |
---|
1148 | @echo "$(SEP) Partially build com interface" |
---|
1149 | $(MAKE) PROBE_COM/PROBE_COM.depends |
---|
1150 | $(MAKE) NAMES_COM/NAMES_COM.depends |
---|
1151 | @echo $(SEP) Updating dependencies |
---|
1152 | $(MAKE) $(ARCHS:.a=.depends) \ |
---|
1153 | HELP_SOURCE/HELP_SOURCE.depends \ |
---|
1154 | |
---|
1155 | depend: depends |
---|
1156 | |
---|
1157 | proto_tools: |
---|
1158 | @echo $(SEP) Building prototyper |
---|
1159 | $(MAKE) AISC_MKPTPS/AISC_MKPTPS.dummy |
---|
1160 | |
---|
1161 | #proto: proto_tools TOOLS/TOOLS.dummy |
---|
1162 | proto: proto_tools |
---|
1163 | @echo $(SEP) Updating prototypes |
---|
1164 | $(MAKE) \ |
---|
1165 | AISC/AISC.proto \ |
---|
1166 | ARBDB/ARBDB.proto \ |
---|
1167 | ARB_GDE/ARB_GDE.proto \ |
---|
1168 | CONVERTALN/CONVERTALN.proto \ |
---|
1169 | NTREE/NTREE.proto \ |
---|
1170 | $(ARCHS_PT_SERVER:.a=.proto) \ |
---|
1171 | SERVERCNTRL/SERVERCNTRL.proto \ |
---|
1172 | AISC_COM/AISC_COM.proto \ |
---|
1173 | GDE/GDE.proto \ |
---|
1174 | |
---|
1175 | #******************************************************************************** |
---|
1176 | |
---|
1177 | valgrind_update: |
---|
1178 | @echo $(SEP) Updating for valgrind |
---|
1179 | $(MAKE) -C SOURCE_TOOLS valgrind_update |
---|
1180 | |
---|
1181 | #******************************************************************************** |
---|
1182 | |
---|
1183 | TAGFILE=TAGS |
---|
1184 | TAGFILE_TMP=TAGS.tmp |
---|
1185 | |
---|
1186 | tags: |
---|
1187 | @echo $(SEP) Updating tags |
---|
1188 | $(MAKE) tags_$(MACH) |
---|
1189 | mv $(TAGFILE_TMP) $(TAGFILE) |
---|
1190 | |
---|
1191 | tags_LINUX: tags2 |
---|
1192 | tags_SUN5: tags1 |
---|
1193 | |
---|
1194 | tags1: |
---|
1195 | # first search class definitions |
---|
1196 | $(CTAGS) -f $(TAGFILE_TMP) --language=none "--regex=/^[ \t]*class[ \t]+\([^ \t]+\)/" `find . -name '*.[ch]xx' -type f` |
---|
1197 | $(CTAGS) -f $(TAGFILE_TMP) --append --language=none "--regex=/\([^ \t]+\)::/" `find . -name '*.[ch]xx' -type f` |
---|
1198 | # then append normal tags (headers first) |
---|
1199 | $(CTAGS) -f $(TAGFILE_TMP) --append --members ARBDB/*.h `find . -name '*.[h]xx' -type f` |
---|
1200 | $(CTAGS) -f $(TAGFILE_TMP) --append ARBDB/*.c `find . -name '*.[c]xx' -type f` |
---|
1201 | |
---|
1202 | # if the above tag creation does not work -> try tags2: |
---|
1203 | tags2: |
---|
1204 | ctags -f $(TAGFILE_TMP) -e --c-types=cdt --sort=no `find . \( -name '*.[ch]xx' -o -name "*.[ch]" \) -type f | grep -v -i perl5` |
---|
1205 | ctags -f $(TAGFILE_TMP) -a -e --c-types=f-tvx --sort=no `find . \( -name '*.[ch]xx' -o -name "*.[ch]" \) -type f | grep -v -i perl5` |
---|
1206 | |
---|
1207 | #******************************************************************************** |
---|
1208 | |
---|
1209 | links: SOURCE_TOOLS/generate_all_links.stamp |
---|
1210 | |
---|
1211 | SOURCE_TOOLS/generate_all_links.stamp: SOURCE_TOOLS/generate_all_links.sh |
---|
1212 | SOURCE_TOOLS/generate_all_links.sh |
---|
1213 | touch SOURCE_TOOLS/generate_all_links.stamp |
---|
1214 | |
---|
1215 | gde: GDE/GDE.dummy |
---|
1216 | GDE: gde |
---|
1217 | agde: ARB_GDE/ARB_GDE.dummy |
---|
1218 | tools: SL/SL.dummy TOOLS/TOOLS.dummy |
---|
1219 | convert: SL/FILE_BUFFER/FILE_BUFFER.dummy shared_libs |
---|
1220 | $(MAKE) CONVERTALN/CONVERTALN.dummy |
---|
1221 | |
---|
1222 | readseq: READSEQ/READSEQ.dummy |
---|
1223 | |
---|
1224 | #*************************************************************************************** |
---|
1225 | # Some user commands |
---|
1226 | #*************************************************************************************** |
---|
1227 | rtc_patch: |
---|
1228 | rtc_patch_area -so LIBLINK/libRTC8M.so |
---|
1229 | |
---|
1230 | menus: binlink |
---|
1231 | @(( \ |
---|
1232 | echo $(SEP) Make everything in GDEHELP; \ |
---|
1233 | $(MAKE) -C GDEHELP -r "PP=$(PP)" all \ |
---|
1234 | ) > GDEHELP.log 2>&1 && (cat GDEHELP.log;rm GDEHELP.log)) || (cat GDEHELP.log;rm GDEHELP.log;false) |
---|
1235 | |
---|
1236 | ifeq ($(DEBUG),1) |
---|
1237 | BIN_TARGET=develall |
---|
1238 | else |
---|
1239 | BIN_TARGET=all |
---|
1240 | endif |
---|
1241 | |
---|
1242 | |
---|
1243 | binlink: |
---|
1244 | $(MAKE) -C bin $(BIN_TARGET) |
---|
1245 | |
---|
1246 | bin/arb_%: DEPOT2/% |
---|
1247 | cp $< $@ |
---|
1248 | bin/%: DEPOT2/% |
---|
1249 | cp $< $@ |
---|
1250 | |
---|
1251 | |
---|
1252 | preplib: |
---|
1253 | (cd lib;$(MAKE) all) |
---|
1254 | |
---|
1255 | # ---------------------------------------- perl |
---|
1256 | |
---|
1257 | perl: tools |
---|
1258 | @echo $(SEP) Make everything in PERL2ARB |
---|
1259 | @$(MAKE) -C PERL2ARB -r -f Makefile.main \ |
---|
1260 | "AUTODEPENDS=1" \ |
---|
1261 | "dflags=$(dflags)" \ |
---|
1262 | all |
---|
1263 | @$(MAKE) testperlscripts |
---|
1264 | |
---|
1265 | testperlscripts: |
---|
1266 | @$(MAKE) -C PERL_SCRIPTS/test test |
---|
1267 | |
---|
1268 | perl_clean: |
---|
1269 | @$(MAKE) -C PERL2ARB -r -f Makefile.main \ |
---|
1270 | "AUTODEPENDS=0" \ |
---|
1271 | clean |
---|
1272 | |
---|
1273 | # ---------------------------------------- |
---|
1274 | |
---|
1275 | wc: |
---|
1276 | wc `find . -type f \( -name '*.[ch]' -o -name '*.[ch]xx' \) -print` |
---|
1277 | |
---|
1278 | # ---------------------------------------- check ressources |
---|
1279 | |
---|
1280 | check_res: |
---|
1281 | $(ARBHOME)/SOURCE_TOOLS/check_ressources.pl |
---|
1282 | |
---|
1283 | # ---------------------------------------- cleaning |
---|
1284 | |
---|
1285 | rmbak: |
---|
1286 | @echo "Cleanup:" |
---|
1287 | @find . \( -name '*%' -o -name '*.bak' -o -name 'core' \ |
---|
1288 | -o -name 'infile' -o -name treefile -o -name outfile \ |
---|
1289 | -o -name 'gde*_?' -o -name '*~' \) \ |
---|
1290 | -exec rm -v {} \; |
---|
1291 | |
---|
1292 | binclean: |
---|
1293 | @echo Cleaning bin directory |
---|
1294 | find bin -type l -exec rm {} \; |
---|
1295 | find bin -type f \! \( -name ".cvsignore" -o -name "Makefile" -o -path "bin/CVS/*" -o -path "bin/.svn/*" \) -exec rm {} \; |
---|
1296 | cd bin;make all |
---|
1297 | |
---|
1298 | libclean: |
---|
1299 | find $(ARBHOME) -type f \( -name '*.a' ! -type l \) -exec rm -f {} \; |
---|
1300 | |
---|
1301 | objclean: |
---|
1302 | find $(ARBHOME) -type f \( -name '*.o' ! -type l \) -exec rm -f {} \; |
---|
1303 | |
---|
1304 | clean2: $(ARCHS:.a=.clean) \ |
---|
1305 | GDEHELP/GDEHELP.clean \ |
---|
1306 | HELP_SOURCE/HELP_SOURCE.clean \ |
---|
1307 | SOURCE_TOOLS/SOURCE_TOOLS.clean \ |
---|
1308 | bin/bin.clean \ |
---|
1309 | perl_clean |
---|
1310 | rm -f *.last_gcc |
---|
1311 | |
---|
1312 | # links are needed for cleanup |
---|
1313 | clean: links |
---|
1314 | $(MAKE) clean2 |
---|
1315 | |
---|
1316 | # 'relocated' is about 50% faster than 'rebuild' |
---|
1317 | reloc_clean: links |
---|
1318 | @echo "---------------------------------------- Relocation cleanup" |
---|
1319 | $(MAKE) \ |
---|
1320 | perl_clean \ |
---|
1321 | GDEHELP/GDEHELP.clean \ |
---|
1322 | HELP_SOURCE/genhelp/genhelp.clean \ |
---|
1323 | binclean \ |
---|
1324 | libclean \ |
---|
1325 | objclean |
---|
1326 | |
---|
1327 | relocated: links |
---|
1328 | $(MAKE) reloc_clean |
---|
1329 | @echo "---------------------------------------- and remake" |
---|
1330 | $(MAKE) all |
---|
1331 | |
---|
1332 | # ----------------------------------- |
---|
1333 | |
---|
1334 | rebuild: clean |
---|
1335 | $(MAKE) all |
---|
1336 | |
---|
1337 | relink: binclean libclean |
---|
1338 | $(MAKE) all |
---|
1339 | |
---|
1340 | tarfile: rebuild |
---|
1341 | $(MAKE) addlibs |
---|
1342 | util/arb_compress |
---|
1343 | |
---|
1344 | tarfile_quick: all |
---|
1345 | $(MAKE) addlibs |
---|
1346 | util/arb_compress |
---|
1347 | |
---|
1348 | save: sourcetarfile |
---|
1349 | |
---|
1350 | # test early whether save will work |
---|
1351 | testsave: |
---|
1352 | @util/arb_srclst.pl >/dev/null |
---|
1353 | |
---|
1354 | sourcetarfile: rmbak |
---|
1355 | util/arb_save |
---|
1356 | |
---|
1357 | save2: rmbak |
---|
1358 | util/arb_save ignore |
---|
1359 | |
---|
1360 | save_test: rmbak |
---|
1361 | @echo "Testing source list.." |
---|
1362 | @util/arb_srclst.pl > /dev/null |
---|
1363 | |
---|
1364 | rel_minor: |
---|
1365 | touch SOURCE_TOOLS/inc_minor.stamp |
---|
1366 | $(MAKE) do_release |
---|
1367 | |
---|
1368 | rel_major: |
---|
1369 | touch SOURCE_TOOLS/inc_major.stamp |
---|
1370 | $(MAKE) do_release |
---|
1371 | |
---|
1372 | do_release: |
---|
1373 | @echo Building release |
---|
1374 | @echo PATH=$(PATH) |
---|
1375 | @echo ARBHOME=$(ARBHOME) |
---|
1376 | -rm arb.tgz arbsrc.tgz |
---|
1377 | $(MAKE) testsave |
---|
1378 | $(MAKE) templ # auto upgrades version early |
---|
1379 | $(MAKE) tarfile sourcetarfile |
---|
1380 | |
---|
1381 | release_quick: |
---|
1382 | -rm arb.tgz arbsrc.tgz |
---|
1383 | $(MAKE) tarfile_quick sourcetarfile |
---|
1384 | |
---|
1385 | # -------------------------------------------------------------------------------- |
---|
1386 | |
---|
1387 | # basic arb libraries |
---|
1388 | arbbasic: links preplib |
---|
1389 | $(MAKE) arbbasic2 |
---|
1390 | |
---|
1391 | arbbasic2: templ mbin com sl $(GL) |
---|
1392 | |
---|
1393 | # shared arb libraries |
---|
1394 | arbshared: dball aw dp awt |
---|
1395 | |
---|
1396 | # needed arb applications |
---|
1397 | arbapplications: nt pa ed e4 wetc pt na nal di ph ds pgt |
---|
1398 | |
---|
1399 | # optionally things (no real harm for ARB if any of them fails): |
---|
1400 | arbxtras: tg pst a3 xmlin |
---|
1401 | |
---|
1402 | tryxtras: |
---|
1403 | @echo $(SEP) |
---|
1404 | @( $(MAKE) arbxtras || ( \ |
---|
1405 | echo $(SEP) ;\ |
---|
1406 | echo "One of the optional tools failed to build (see error somewhere above)" ;\ |
---|
1407 | echo "ARB will work nevertheless!" ) ) |
---|
1408 | |
---|
1409 | arb: arbbasic |
---|
1410 | $(MAKE) arbshared arbapplications help |
---|
1411 | |
---|
1412 | all: checks |
---|
1413 | $(MAKE) links |
---|
1414 | $(MAKE) com |
---|
1415 | $(MAKE) arb |
---|
1416 | $(MAKE) libs |
---|
1417 | $(MAKE) convert tools gde readseq |
---|
1418 | $(MAKE) binlink |
---|
1419 | $(MAKE) perl |
---|
1420 | -$(MAKE) tryxtras |
---|
1421 | ifeq ("$(DEVELOPER)","SAVETEST") |
---|
1422 | $(MAKE) save_test |
---|
1423 | endif |
---|
1424 | @echo $(SEP) |
---|
1425 | @echo "made 'all' with success." |
---|
1426 | @echo "to start arb enter 'arb'" |
---|
1427 | |
---|