| 1 | #ifndef AW_AWARS_HXX |
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| 2 | #define AW_AWARS_HXX |
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| 3 | |
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| 4 | #define AWAR_DB "tmp/nt/arbdb/" |
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| 5 | #define AWAR_DB_PATH AWAR_DB "file_name" |
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| 6 | #define AWAR_DB_NAME AWAR_DB_PATH "_without_path" // awar is automatically updated when AWAR_DB_PATH changes |
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| 7 | #define AWAR_DEFAULT_ALIGNMENT "presets/use" |
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| 8 | |
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| 9 | #define AWAR_TREE "focus/tree_name" |
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| 10 | #define AWAR_TREE_REFRESH "tmp/focus/tree_refresh" // touch this awar to refresh the tree display |
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| 11 | #define AWAR_CONFIGURATION "focus/configuration" |
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| 12 | |
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| 13 | #define AWAR_SECURITY_LEVEL "tmp/etc/security_level" |
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| 14 | |
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| 15 | #define AWAR_GDE_EXPORT_FILTER "tmp/gde/export_filter" |
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| 16 | #define AWAR_GDE_FILTER "tmp/gde/filter" |
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| 17 | |
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| 18 | #define AWAR_DB_COMMENT "description" |
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| 19 | |
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| 20 | #define AWAR_PT_SERVER "nt/pt_server" |
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| 21 | #define AWAR_TARGET_STRING "nt/target_string" |
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| 22 | #define AWAR_PRIMER_TARGET_STRING "nt/primer_target_string" |
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| 23 | #define AWAR_GENE_CONTENT "nt/gene_content" |
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| 24 | #define AWAR_MIN_MISMATCHES "nt/min_mismatches" |
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| 25 | #define AWAR_MAX_MISMATCHES "nt/max_mismatches" |
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| 26 | #define AWAR_ITARGET_STRING "nt/itarget_string" |
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| 27 | #define AWAR_EXPERT "nt/expert" |
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| 28 | |
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| 29 | #define AWAR_SAI_COLOR_STR "tmp/sai_color_str" //to visualize SAIs in probe Match window |
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| 30 | |
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| 31 | /* local awars for edit and edit4: */ |
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| 32 | |
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| 33 | #define AWAR_SPECIES_NAME_LOCAL "tmp/edit/species_name" /* string: name of selected species */ |
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| 34 | #define AWAR_CURSOR_POSITION_LOCAL "tmp/edit/cursor_position" /* int: position in sequence */ |
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| 35 | #define AWAR_EDITOR_ALIGNMENT "tmp/edit/alignment" /* string: alignment used by editor */ |
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| 36 | |
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| 37 | /* global awars */ |
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| 38 | |
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| 39 | #define AWAR_CURSOR_POSITION "tmp/focus/cursor_position" /* int: position in sequence range=[1;len] */ |
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| 40 | #define AWAR_SET_CURSOR_POSITION "tmp/focus/set_cursor_position" /* int: set position in sequence (remote control for ARB_EDIT4) range=[0;len-1] */ |
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| 41 | |
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| 42 | #define AWAR_SPECIES_NAME "tmp/focus/species_name" /* string: name of selected species */ |
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| 43 | #define AWAR_INFO_BUTTON_TEXT "tmp/focus/info_button_text" /* string: to display selected species */ |
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| 44 | #define AWAR_ORGANISM_NAME "tmp/focus/organism_name" /* string: name of selected organism (differs from AWAR_SPECIES_NAME only for pseudo-gene-species) */ |
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| 45 | /* - normally AWAR_ORGANISM_NAME contains the same value as AWAR_SPECIES_NAME |
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| 46 | - if AWAR_SPECIES_NAME contains the name of a pseudo gene-species then AWAR_ORGANISM_NAME |
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| 47 | contains the name of the species the pseudo gene-species originated from */ |
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| 48 | // #define AWAR_EXPERIMENT_NAME "tmp/focus/experiment_name" /* string : name of selected experiment */ |
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| 49 | #define AWAR_SAI_NAME "tmp/focus/sai_name" /* string : name of selected SAI (e.g. in EDIT4 and 'Manage SAI') */ |
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| 50 | #define AWAR_SAI_GLOBAL "tmp/focus/sai_global" /* string : name of selected SAI in EDIT4/Visualize SAI Tool - used in RNA3D Tool*/ |
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| 51 | |
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| 52 | #define AWAR_HELIX_NAME "tmp/focus/helix_name" /* string: name of selected helix, for helix numbers append _NR, get default by GBT_get_default_helix */ |
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| 53 | |
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| 54 | #define AWAR_ERROR_MESSAGES "tmp/message/displayed" /* error-messages: display awar */ |
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| 55 | |
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| 56 | #define AWAR_FOOTER "tmp/LeftFooter" // mode line (showing help for selected mode) |
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| 57 | #define AWAR_FOOTER_MAX_LEN 100 // max allowed textlen for mode line |
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| 58 | |
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| 59 | #define AWAR_AWM_MASK "tmp/awm_mask" |
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| 60 | |
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| 61 | #else |
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| 62 | #error aw_awars.hxx included twice |
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| 63 | #endif |
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